Saccoglossus kowalevskii (acorn worm): 100368399 Help Entry 100368399         CDS       T04123                                  Name (RefSeq) collagen alpha-1(IV) chain-like   KO K06237   collagen type IV alpha Organism sko  Saccoglossus kowalevskii (acorn worm) Pathway sko04382   Cornified envelope formation sko04512   ECM-receptor interaction sko04518   Integrin signaling sko04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sko00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100368399    04518 Integrin signaling     100368399  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100368399  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     100368399  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sko04147]     100368399    00536 Glycosaminoglycan binding proteins [BR:sko00536]     100368399 Exosome [BR:sko04147]  Exosomal proteins   Exosomal proteins of other cancer cells    100368399 Glycosaminoglycan binding proteins [BR:sko00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100368399 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  100368399 NCBI-ProteinID:  XP_006825880 UniProt:  A0ABM0N0T9 LinkDB All DBs Position Un AA seq 1693 aa AA seqDB search MKFREVIERHVLICTILVTIYLEFTYGAACTGCTPRCYCNATKGDRGVAGFPGLQGPPGL PGFPGPEGPQGPRGFKGEEGSPGSSGPKGLRGRMGGPGFPGVPGIPGMPGLEGPAGEPGM PGCNGSKGEVGLPGSPGGGTPGPQGPPGYPGLKGEPGDTAPMQKGIKGEPGLPGFNGIPG PPGLNGLNGPKGDKGDDGMKGENGFPGQPGTKGEMGIDFQGPPGAKGERGPPGPPGDSRQ PHIEPNSTYNVKGAMGEPGDKGDKGFPGMIGMKGSMGSKGSPGFKGSIGKKGEQGPIGPP GKRGKDGPAGRFGSPGEKGQPGIPGLPGSPGLSGPKGDTGPRGRNGLQGPPGDPGNGDGI GDPGPPGPQGRDGEPGRPGLPGMKGFQGERGRDGFPGPPGQPGPIGPAGSPGSGDKGESG EPGMPGIPGQSGVPGESGRSGPKGDRGMPGITRVGPPGMDGLPGSPGLPGLPGPMGELGP IGPPGPPGSGVGEIGPPGPPGPRGAQGRDGFPGPPGPYGVEGPKGLKGEKCGPCLIGPPG DKGDPGPQGTSGTPGLPGPTGVAGPVGGKGSEGFPGPPGQDGINGRPGQPGLPGRDGSKG EAGPILPGGAGPSGPIGPSGAKGDTGPAGLPGPPGLPSPPVTIGRPGEKGDKGEPTTGQP GRTGPKGEPGPSGPRGPFGLKGQKGEPIIGGGPGQRGPPGPPGPEGPPGSQGLMGGVGPP GPRGPTGPPGFQGAPGDRGDSGPPGFGPPGQPGAKGFPGLPGDPGIKGDSGTPGVPGLNG PAGQPGQKGESGFGGGDPGEPGDRGLPGQPGLPGRDGERGPPGLPGMQGRDGFPGLVGEK GDMGPIGPAGQPGSPGLPGDRGFPGRDGLPGRQGPPGSPGVIGDKGNTGPRGEPGDSSEV GPKGDPGLSGTPGDPGLPGAAGPPGTPGLNGAPGLPGFKGDIGPIGLPGASGPPGQPGLN GAPGEKGMDGVDGVPGRPGQPGRDGFNGGKGDSGPPGFPGQPGLPAPAGDKGDAGDPGPP GPAGEPGSQGLPGLIGNKGDRGFPGATGPPGPFGPKGNSGTPGFQGAPGFPGPKGEMGDM GEPGTAGEDGDPGFPGSPGIPGPIGPPGFPGPDGDRGSDGLPGRPGSLGPIGPKGDQGQR GQKGEPSPAPAPIRTKGDQGPPGNPGIPGLPGINGAKGDQGEPGTPGNDGPTGPPGNPGF PGSPGQQGDRGPAGVDGIPGGSGPKGDKGNLFVNWFLTKFVYLVQLDNWTIRFGGTGQKG EPGDEGEDGFPGPPGLPGPPGNEGRSGSPGLKGEPGPTGLPGRATPGPPGQPGQPGSLGP IGMKGMAGEPGFPGPAGFPGRDGGPGDDGPPGLVGPPGPRGFDGLNGQKGEPGPLPDMST MKGTKGEPGLPGRQGSPGEIGPAGPPGIRGFPGEKGNLGPRGGQGFNGLPGDPGPKGNQG FQGPVGPPGIPGNDGPPGSPGVGGSAAGFFITRHSQTVQIPQCPRNTVRMWEGYSLLYVQ GNERSHGQDLGTAGSCLRRFSTMPFMFCNINNVCNVANRNDYSYWLSSPEPMPMDMAPIQ ASNIQPFIGRCSVCEAPNQVIAVHSQTINVPDCPSGWSGLWIGYSFVMHTGAGSEGTGQA LASPGSCLEDFRSSPFIECHGDGKCNYYATTYSFWLATIDRDRQFQRPVSDTLKAGRLRD RISRCRVCMRILE NT seq 5082 nt NT seq  +upstreamnt  +downstreamnt atgaagttcagggaagtaatagaacgccatgtcctgatatgtacgatactcgttacgatt tacttggagttcacgtacggagcggcatgtactggatgcacgccgagatgttactgtaat gctactaagggagataggggtgtggcaggtttcccaggactacaaggcccaccaggatta ccagggtttcctggaccagaaggaccacaaggaccaaggggtttcaagggtgaagaagga tcacctggttcatccggacctaaaggacttcggggtcgaatggggggtcctggttttcct ggtgtcccaggtattccaggtatgcctggacttgaaggaccagctggtgagcctggtatg cctggctgtaatggctcaaagggtgaagtaggtttgccaggttcacctggcggtggcact ccgggtcctcagggtcctcctggttatccaggactaaagggtgagcctggtgatacagca ccaatgcaaaaaggcatcaaaggagaaccaggtctaccaggctttaatggaatcccaggg ccgccaggattaaatggtttaaatggtcctaaaggcgacaaaggcgacgatggaatgaaa ggagaaaatggtttcccagggcaacctggtacgaaaggtgaaatgggtattgacttccaa ggtccaccaggtgcaaagggagaacgtggtccacccggaccaccaggagattcaagacaa cctcatatagaacctaattctacatacaacgttaaaggagccatgggagagccaggtgat aagggtgataaaggattcccaggaatgattggaatgaaaggttcaatgggatctaaaggt tcaccaggattcaaaggttcgattggtaaaaaaggagaacagggcccaattggtcctccg ggtaaaagaggtaaagatggtcctgctggtcgttttggttcgccaggtgaaaaagggcaa cctggaatcccaggtttgcctggttctcctggtttatcgggtccaaaaggcgacactggt ccaagaggaagaaatggtttacagggaccaccaggtgatcctggtaatggtgatggtatt ggtgatcctggtccacctggtcctcaaggacgagatggcgaaccaggtcgtccaggctta cctggtatgaaaggttttcaaggtgaaagaggtcgtgatggttttccaggtccaccagga cagccaggtccaataggtccagccggtagccctggaagtggtgacaaaggggaatcagga gagccaggaatgccaggtattccaggccagtctggggttccaggagaatcaggtcgatca ggtcctaaaggtgacagaggtatgccaggaataactcgagttggacctccaggcatggat ggattaccaggtagcccaggtttaccaggtttacctggtcccatgggtgaacttggtcca attggtccgcctggtcctccgggttctggggtaggtgaaattggcccacctggtccacca gggcccagaggtgcacaaggaagggacggatttcctggtcctccaggtccatatggtgta gagggtcccaaaggtttaaaaggagagaaatgtggtccctgcttgattggtcctcctggt gataaaggtgatcctggtcctcaaggtacatctggaacaccaggtttacctggacctact ggtgttgccggtcctgttggtggtaaaggttctgaaggttttcctggccctccaggtcaa gatggtataaatggtcgtccaggtcaaccaggtttaccgggtagagatggtagcaaagga gaagctggacccatattaccaggtggagcaggcccatctggtcctattgggccatcaggt gcaaaaggagatacaggcccagcaggtttgcccggtccaccaggtttaccttctccaccg gtgacaataggacggccaggggaaaaaggtgacaaaggagaaccaaccactggacagccg ggtcgaactggtccaaagggtgaacctggtccatcgggacctagaggaccttttggtcta aaaggacaaaaaggagagccaatcattggtgggggtcctggtcaacgaggaccacctggt cctcctggtcctgaaggtcctcctggttcgcagggactgatgggcggagttggtcctcct ggtcctcggggtccaactggtcctcctggctttcagggggcacctggtgatagaggtgat tctggacctcctggctttggaccaccaggccaaccaggtgctaaaggattccctggtctt cctggagatccaggtattaaaggagatagtggtacaccaggagtacctggtttaaatggt cctgctggccaacctggacaaaagggtgagtctggctttggtggtggtgatcccggtgaa ccaggagatcgtggactacctggtcaaccaggtttacctggtcgtgatggagagagagga ccacctggtctaccaggaatgcaaggaagagatggttttccaggtctcgttggtgaaaag ggtgatatgggtccaatagggcctgcaggacaacctggttcacctggattaccaggagac agaggatttccaggaagagatgggttgcctggtcgtcagggtcctccaggttctccaggt gtaattggtgacaaaggtaacacaggtccacgaggtgaaccaggtgattcatctgaagtg ggaccaaaaggagatcctggtctcagtggtactccgggtgatccaggtttacctggtgct gcaggaccacctggaactcctggattgaatggtgctcctggccttccaggtttcaaggga gacattggtccgattggtcttcctggtgcatctggcccaccaggacagcctggcttaaat ggagctcctggtgaaaagggtatggatggcgttgatggtgttcccggtcgtccaggtcaa ccaggtcgagatggatttaatggaggcaaaggagattctggtccacctggatttccagga cagccaggattacctgcaccagctggagataaaggagatgctggtgaccctggtccgcca ggaccagctggtgagcctgggtcccaaggtctacctggattaattggtaataaaggagac agaggatttccgggagctacaggaccacctggtccttttggaccaaagggaaattctggc acacctggatttcaaggggctcctggctttccagggccaaaaggtgaaatgggtgatatg ggtgaaccaggtacagcaggtgaggatggtgatccaggtttccctggttcaccgggcatt ccaggaccaattggtccaccaggctttccaggacctgatggtgacagaggctcggatggt ttacctggtcgtccaggttctcttggaccaattggtccaaaaggtgaccaaggacagcga ggccaaaaaggtgaaccatctccagcaccggcaccaattcgcacaaaaggagatcaagga ccacctgggaatccaggtatcccaggtcttccaggaattaatggtgcgaagggtgatcaa ggtgaaccaggaactccaggtaatgatggacctactggaccaccaggaaatccaggtttt ccaggaagtccaggacaacaaggagacagaggtcccgctggagttgatggtattcctggt ggatctggtccaaagggtgacaaaggtaatttatttgttaattggtttttaacaaaattt gtttacctggtccaactggacaattggaccatcaggtttggtggaactggacagaaaggt gaaccaggagatgaaggagaagatggattcccaggtccaccaggtttgccaggaccacct ggaaatgaaggaagatctggttcaccaggcttgaaaggagaacctggaccaacaggatta ccaggtcgtgccacacctggcccgcctgggcaacctggccaacctggttcacttggacct attggtatgaaaggtatggctggtgaacctggattccctggaccagctggttttccagga cgtgatggtggtcccggtgatgatggtccaccaggactcgtaggacctccaggaccaaga ggctttgatggcttaaatggacagaagggagaaccaggtcctctaccagatatgagtaca atgaagggaaccaagggtgaaccaggcttaccaggtcgacaaggatctcctggtgaaatc ggtccagctggacctccaggcattcgtggatttccaggagaaaaaggaaatttaggacct aggggtggtcaaggtttcaatggtcttcctggtgaccctggaccaaagggaaatcaagga ttccaaggtcctgtaggtcctcctggtataccaggtaatgatggtccacctggatcacca ggtgtcggtggcagtgcagctggcttctttattacccgccacagtcaaacagtacaaata cctcagtgtccaagaaacacagtaagaatgtgggaaggatatagtttactctacgttcaa ggaaatgaaagatcacatggacaggatcttggcaccgctggtagttgtctacgtagattc agtactatgccgtttatgttctgtaatatcaataatgtatgtaatgtagcaaacagaaat gattattcctattggttgtcttctccggaacccatgcctatggatatggctccgatacag gcgtcaaacattcaaccattcattggtcgctgctctgtctgtgaagcaccaaatcaagta atagcagtccacagtcaaactattaatgttccagattgtccctcaggatggtctggactc tggataggttatagctttgtaatgcacactggtgctggttcagaaggaaccggtcaagcc ttggcttcgcctggttcctgccttgaagactttagatcttctccattcatagaatgccat ggtgatggcaaatgtaattattatgcaacaacgtatagtttctggttagcaacaatagat agagacagacaattccaaagacctgtatcagatacactaaaggctggcagactgagggac aggatcagtagatgtcgtgtctgtatgagaatacttgaataa

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