Saccoglossus kowalevskii (acorn worm): 100368527
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Entry
100368527 CDS
T04123
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03430
Mismatch repair
sko03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100368527
03460 Fanconi anemia pathway
100368527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sko03400
]
100368527
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100368527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
ExsD
Motif
Other DBs
NCBI-GeneID:
100368527
NCBI-ProteinID:
XP_002736491
LinkDB
All DBs
Position
Un
AA seq
532 aa
AA seq
DB search
LQTLLNFEQCTPSEEVCTEYGLNKGALNTDVFKLSGLVSKPDHGLGRSTCDRQFCFINKR
PCDYSKVFKVLNEVYHMYNRHQYPFVVLDITLSKESVDVNITPDKRQILVAEEKTLLAVV
KSSLIKLYEPRSALYQMNQKPMAILKSPSQPGPAIQTLTLSRLKRAYSHSGSVDIESPGR
PAKQPRLDNFVIASSQSIGKTEDEKQDSEGFSIDSNITCSSQSSLGSSTASSQRSENTTD
ALCTAGKQTLLKIEQISGWKREDNGVCSTSHESSQNTEVDKEVNIQRHEVKVPFSLPGIA
NRLKQCQGAKSDFKTAGRSFRAEIKPQDNKSAEEELQRKISKEMFKDMEVIGQFNLGFII
VKIKEDLFIVDQHATDEKYNFEMLQKHTNIQSQKLIQPQKLELTPVNESVLMDNLEIFQK
NGFDFITEEGDTGKKVKLISLPMSKNWTFGKQDIDELIFMLNDAPGTMCRPSRVRQMFAS
RACRQSIMVGTALNKTEMKKLICHMGEIEQPWNCPHGRPTMRHLFNITMLPD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ttacagacattgttgaattttgagcagtgtacaccaagtgaagaagtatgtacagaatat
ggattgaataaaggtgctctcaacacagatgttttcaagttatccggattagtttctaag
cctgaccatggattgggaaggagcacttgtgatagacagttttgttttattaataaaaga
ccatgtgactacagtaaggtatttaaagtattgaatgaagtgtatcacatgtacaataga
catcagtatccctttgtagtattggatatcacattgtctaaggagagtgtagatgtgaat
atcactccagacaaaagacaaatattggttgcagaagaaaaaacattactggctgttgtc
aagtcttctttgataaagttgtatgaacctagatcggctttataccaaatgaatcagaaa
ccaatggctatattgaaatcaccatctcaaccaggaccagccattcaaacattaacactc
tcaaggttaaaaagagcctattctcattctgggagtgtggacattgaatcaccaggtaga
ccagctaaacaaccaagactggataattttgtgatcgcatcatcacaatctattggaaaa
acagaagatgagaagcaagacagtgaagggttcagtattgacagtaatatcacatgtagc
agtcaaagttcacttggtagcagcactgccagtagccaacgatctgagaataccactgat
gcattgtgtactgcaggcaaacagacattgttaaaaatagagcagatttcaggatggaaa
cgagaagataatggtgtttgtagcacgtcgcatgagtcttcacaaaatacagaagttgat
aaagaggtgaatattcaaagacatgaagtaaaagtgccattctcattgcctggtattgct
aatagacttaaacaatgtcaaggggctaaaagtgatttcaaaacagcagggaggtcattt
agagcggagataaaaccacaagacaataaatcagccgaggaagaattacaacgaaaaatt
agtaaagagatgtttaaagatatggaagtgattggacagtttaacttgggatttatcatt
gttaaaattaaagaagatttgttcatagttgaccagcatgcaacagacgagaagtataat
tttgaaatgttacaaaagcacaccaatatacaaagtcagaaactcattcaaccacagaaa
ttggaacttacaccagttaatgaatcagtattgatggataacttggaaattttccagaaa
aatggatttgactttataactgaagaaggtgatactggtaaaaaagtgaagctaatatct
ttaccaatgagtaagaattggacgtttggtaaacaggatattgatgaacttatatttatg
ttgaatgatgctccaggtacaatgtgcaggccgtcaagagtccgacagatgtttgcatct
agagcatgtcgtcaatctattatggttggtacagcattaaataaaacagaaatgaaaaag
ctcatctgtcacatgggggaaattgaacaaccttggaattgtccacatggaagacccaca
atgcgtcatctttttaacattacaatgttaccagattaa
DBGET
integrated database retrieval system
