Saccoglossus kowalevskii (acorn worm): 100368627
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Entry
100368627 CDS
T04123
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100368627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100368627
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100368627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
WD40_like
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Beta-prop_WDR41
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
100368627
NCBI-ProteinID:
XP_006816305
UniProt:
A0ABM0M8G4
LinkDB
All DBs
Position
Un
AA seq
645 aa
AA seq
DB search
MASNLCVLSPNSELLAVSSPDGRLKLWDTTTGTLNQQYTPSSHLSATCTCVAWSTLRESR
GAPRRKKRKSEGIRKGVASSITENVDLLALGTSVGSILLYSAVKGDLQSKMDGGHADTVN
CLCWHLEEDSLYSCSDDHHITEWSVSTGKVKCKWKGDKSAIHCISICPGGTVMLSAARTI
KVWNLKNKELLKRYTGHASPVSQINCVPMATRTISISNDEDDALHDVNGLYFLSTAVHDR
VLNAWHIKSNSKDKNAVAAFSLIEEPISFDVAQCLQSDQSIFIAVLTRTGQVQVFDPTLN
GKSKKPIKPRCTVQVATQGSIETAAKPLPIVCVQFCKGTDNTMLIGYGTFLKPVFEKVCI
TNGDTDICLIREDPTLVHFQHQDTVLNKVKTPLTSEEVKIVTTQHFVPMGPQDASTSRGA
VTKRKTQKNEVAMEDRLNAISLASQNLQMSSIPQSDSLVLLLTQGLQSQDKQILSRVLKY
GSESLITNTVKRLPVQLVVLFAEELALRINSEPERGTILLKWVKALLTLHASYLSTFPEV
IKKLSTLYQMMDTRVLTYTKLSRLRGRLSLMMSQISSQTSGVSKKELDSRPAMLYLDSSD
EADEMDELLPSHSESEGEWEELSDMDAEDGNDEEEDKQDDSSDEG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaacctgtgtgttctctcgccaaactccgagttgttggcggtttctagtcca
gatggacggttgaaactgtgggacacgactactgggacattgaatcagcaatacacaccg
agttcacatctctcagcaacatgcacctgtgttgcgtggagcacgcttcgggagagcagg
ggagctccaaggaggaagaaaaggaaatctgaaggaattagaaagggagttgcttcatca
ataacagaaaatgttgatttacttgcgcttgggacatctgttgggagcattttattatat
agtgctgtaaaaggagatttgcagagtaaaatggatggtggtcatgctgatacagtaaac
tgtttatgttggcatttggaagaagattctctctacagttgttctgatgatcaccatata
acggaatggagtgtatcaacaggaaaagtgaaatgcaaatggaaaggagataaaagtgcc
attcactgtataagtatatgccctggtggtacagttatgttatcagcagcgagaactatc
aaagtgtggaatttgaaaaataaagaattactcaagaggtatacaggtcatgccagtcca
gtttcacaaataaattgtgttcctatggcaacaagaacaattagtatcagtaatgatgaa
gatgatgccttgcatgatgtgaatggattgtattttttatcaactgctgtccatgacagg
gtacttaatgcatggcatatcaagtctaattccaaagataagaatgcagtagcagctttc
agtttgattgaggaaccaatctcatttgatgtagcacagtgtctgcaatcagatcagtct
atatttatagctgtgttaacaagaactggtcaggtacaagtgttcgatcccacattaaat
ggaaaatctaaaaaacccatcaaaccaaggtgtacagttcaagtggccactcaggggagc
atagagacagcagccaaaccattgccaattgtatgtgttcagttctgtaagggtacagac
aatactatgcttattggctacggcacattccttaaacctgtatttgaaaaagtgtgtatt
acgaacggtgacacagatatatgtctgattagagaggatccaacgctagttcattttcaa
caccaagatacagtgcttaataaggtgaaaaccccgctgacctcggaagaagtcaaaata
gtcacaacacaacattttgtaccaatgggaccacaggatgcttccacgtcgaggggagcg
gttacgaaaagaaaaacacaaaagaatgaggttgcaatggaagatagattaaatgcaata
agtttagctagtcagaatctacagatgtcaagtataccccagtcagattcgttagtattg
ttactaacgcaaggtcttcaaagtcaagataaacaaatactatcgagggtattgaagtat
ggaagtgaatcacttattacaaatacagtcaaacgattaccagtgcaattagttgtgctt
tttgcggaggagctggctcttaggataaacagtgaaccagaaaggggcacaatactgctg
aagtgggtgaaagcgctgttaacgctccatgcatcataccttagtacgtttcctgaagtc
atcaagaaactcagtacattgtatcaaatgatggataccagagtattaacttacactaaa
ttatccaggttacggggcagactatcattgatgatgtcacagatttcatcacagacatcg
ggtgtctccaagaaagaactggacagtagacctgcaatgttgtatttagattcctcagat
gaagcagatgaaatggatgaattattgccaagtcattcagaatctgaaggagaatgggag
gaattgtcagacatggatgcagaggatggaaatgatgaagaggaagataagcaagatgat
agtagtgatgagggctaa
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