Saccoglossus kowalevskii (acorn worm): 100368776
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Entry
100368776 CDS
T04123
Name
(RefSeq) probable helicase with zinc finger domain-like
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100368776
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
100368776
3'-5' decay
Other 3'-5' decay factors
100368776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
ResIII
PAM2
PhoH
AAA_22
Motif
Other DBs
NCBI-GeneID:
100368776
NCBI-ProteinID:
XP_006814667
LinkDB
All DBs
Position
Un
AA seq
1459 aa
AA seq
DB search
MPTLLTESLEDVKITANADYDISVCNKKSSHTWTFTLHCKAPIQLSRVALLYDIHHNHFH
ISAVSCGDSKRQTQQEISPNSQEWVASRNNNNNFKSNERIYRVKLSFATEIFGTFRQSIV
FDFGSEPVLMKRVSIDVVSPSDQKQLDEARDTLICTSERWDRSNRNIIDFEPPLMESTDR
DKGLLSFYILPTTPDKLFKHSVLDKALTKNNYRQRMHDLLNIEEMAQFKDISRFNVKATL
QLVPSFLLLPGRMQGAKYSVNGELFAQMRLNDDLSEQTPGGRLILNSCSTALFSLVSYKK
TTDTVYELAVEEKGKGFIFLKVSKNCVDELKLSKDTEIRAEVQFQLNRLPLCEMHYAVDK
VPDLDMLFPKVSSPPHIPWTPHRQWSEQLDTRLNPKQKEAVIAMTTPLNIHLPPILVIGP
FGTGKTFTIAQASKLILQQPNARILICTHSNSAADLYIKEYLHSYVESGHDIAKPLRIYF
KDRWVSTVHPIVQRYCLIKDRSFQQPTREDVLNHRVIVATLSTSRNLSHLGLEPGFFTHI
LLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPEVHSDFARDRGLHVSLLERLFEH
YPDEHPCRILLCENYRSHDAIVDFTSKLFYEDKLIASGKQPPHKDYFPLTFFTARGEDIQ
DKNSTTFYNNAEVFEVVERVEELYKNWPMEWGKNDTNNIGVVTPYADQVFRIRSELRRKR
LNGVNVERVLNVQGKQFRALFISTVRTRNTCKTQQNKKITKAHNSEEEMDLGFLSNAKLL
NTAITRAQSLVAVIGDPVSLCSVGKCRKLWEKFIEICSENKSLMGMTYSTIRSQLDGVEL
KKTYTLNPLAPEFIPRALRAQMVGMPFIQGSGAVPVTAIPDATRGHAFQSAANQQLPSSP
LVGSPSRPYGPFLPMGSGSLVRPASPVHRIDPHTGMSYVYVPNVYNPGVLMPVPLRMLPN
GQMLQPWSLQSWSSHTASPSRENTGQERSEKPRQDAAAVRPVPTHNKECPPFGGLLMEGK
DGVALKMKERQMQEEYKYLKRTRGEEYANMFLSSQNRLGGTFGRFDNRFIPHALFSPRQQ
GPHSHQQQQQQQQQQQQQQQQQRVTQGFGDQQNYQQPQQWLEQQQQLQQQRMAAMNIAVE
GHGGALSRAADSSDTARHQENAQRQGTLGNMQNYVSNTNASQDGISSGGNNVTRPMETWT
QSNDDQSVMDMVGRMPQIKSITAVGHRNQCREVAQQAYGEKWSEVSRSGDDWNNGWNDSG
LQWGNSGEMRSQRQPTNMGPVDMSASLSKLSQATGRSTPLYERQSERNSPAYRMWQQQQQ
QQQQQQQQQQQQEQRQQQSQQQPQQPVYRYSVENYPKLGSRSMSPLSQPQQVRMGVPSST
SPSYSEASSPTSPSQQGQVAKQDIKTPSGMSYASALRAPPKPKPKPVAEGRGTASPDPLS
LIKDLNIRSNNDGYYSYFN
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctgctgactgaatctttagaagatgtaaagattactgctaatgctgattat
gatatatctgtttgtaacaagaaatcctcacatacctggacatttacactacattgcaaa
gcacctatacaacttagtcgagtagctcttttgtacgatatccatcacaatcatttccat
atctcggccgtatcttgtggtgatagcaaacgacagacgcaacaagaaattagtcctaac
tctcaagaatgggtagcttcaaggaacaacaataacaacttcaagagcaatgagcgcatt
taccgagtaaagctttccttcgctacggaaatcttcggcacgtttcgccagtccatagtc
tttgatttcggtagtgagcctgtactcatgaagagggtcagcattgatgttgtttcacca
agtgaccaaaagcagctcgatgaggcacgcgatacgctgatttgtacatccgagaggtgg
gaccgtagcaatagaaacatcatagattttgagcccccactcatggagtcaactgacaga
gataaagggttgttatctttctacatactgccaactacacctgataagctctttaagcat
tctgtactcgataaggctttaaccaaaaataattacagacagcggatgcatgatttactt
aacattgaagagatggcacaattcaaggacatcagtaggttcaatgtaaaggcaacgttg
cagcttgtccctagttttctcttgctacctggtcgaatgcaaggtgctaagtattcggtc
aatggagaattatttgcccagatgcggttgaatgatgacctatcggaacagactccaggt
ggacgactaattctgaatagctgcagcactgcattgttctcacttgtgtcttacaagaag
accacggatactgtgtacgagttagctgtggaagagaagggcaaaggattcatctttctc
aaggtctccaagaactgtgtagacgaattgaaattatctaaagatactgagataagagca
gaagttcagtttcaacttaacaggcttccgttatgtgaaatgcattatgctgtagataaa
gtacctgatttagatatgttatttccaaaagtgagttcccctccccacattccatggact
ccacacagacagtggagtgaacagctagacactcgactcaatcctaaacaaaaagaagct
gtgatagcaatgacaacacctctgaatattcatctgccgcccattctggttattggacca
tttggtactggtaaaactttcaccatagctcaggcatctaaacttatcttgcagcaaccc
aatgctcgaatcctcatctgtactcattccaacagcgctgctgacttatacatcaaagaa
tatttacattcctatgttgaatcaggccatgacatagccaagcctttgagaatctatttt
aaagaccgctgggttagcactgtccatcctattgtacagcgatactgccttatcaaggat
cgttcatttcaacaacctacaagggaagacgtgttgaaccatcgtgttattgtcgccact
ctcagtacttctcgtaaccttagtcatctaggcttagaaccaggtttcttcactcacata
ttgctggatgaagctgcccaagccatggaatgtgagaccatcatgcccttagcactggct
actaagaacaccagaatcgtactggcaggagatcacatgcagctgagcccggaggtccat
tctgactttgccagagatcgtggtttgcatgtatccctgcttgagaggctgtttgagcat
taccctgatgaacatccatgtagaatcttattgtgtgagaattatcgatctcatgatgca
attgttgatttcacttccaaattattttatgaagacaagttgatagccagtggtaaacaa
ccaccccataaggattactttccgcttactttctttactgccagaggtgaagatattcaa
gataaaaacagtactaccttttataataatgcagaggtgtttgaagttgtggaaagagta
gaggaactttacaagaattggccaatggagtggggcaagaatgacacaaataatatcggt
gtggtcactccatatgctgaccaggtgttcaggataagatctgagttgagaagaaaaaga
ctgaatggtgtgaatgttgaaagagtgcttaatgtccagggtaaacaatttcgagctctt
ttcatcagtaccgtacgcacaagaaatacttgtaaaacacaacagaataaaaaaattacc
aaagctcacaactccgaggaagaaatggatctgggatttttgtccaatgctaagttatta
aacactgccataaccagagcccagtctttagttgccgtcattggtgatcctgtttcatta
tgttctgtcggtaaatgcagaaaactctgggagaagtttattgaaatctgtagtgaaaac
aagagtctgatgggtatgacctactccacaatcagatctcagcttgatggtgttgaactg
aagaaaacatatacactgaatccactagctcctgaattcattccgagggccttgagagct
cagatggtcggcatgcctttcatacaaggatcaggagctgtacctgtaacagcaattcca
gatgccactagaggtcatgcatttcagtctgcagccaatcaacaactacccagtagtcca
ttggtgggaagtcctagtagaccttacggccctttccttccaatgggcagtggtagttta
gtgcggccggctagtccagtgcacagaatagatccacacactggtatgagttatgtctac
gtaccaaacgtgtataatccgggtgttctcatgcctgttccactgcgcatgctgccaaat
ggtcagatgcttcaaccgtggagccttcaatcctggtcctctcacaccgcctctccaagc
agagaaaacactgggcaagaaagatctgagaaacccaggcaggatgctgcagctgtacgt
ccagtccctacacacaataaagagtgtcctccttttggaggattgctgatggagggtaaa
gatggggtggctttaaagatgaaggagaggcagatgcaggaagagtacaaatacttaaag
cgtacaagaggagaagaatatgctaatatgtttttgtcatcacaaaataggttgggtggc
acatttggtagatttgacaatcgttttattccacatgctctgttttcaccaagacaacaa
ggtcctcattcacatcaacaacaacaacaacaacagcagcagcagcagcaacaacaacaa
caacagagagttactcaaggatttggggatcagcagaattatcagcaaccacagcagtgg
ttagaacagcaacagcagctacaacaacaaagaatggcagccatgaatatagcagtggag
gggcacggtggagctctatctagagctgcggacagctcagacactgcaagacatcaagag
aatgcccagagacaagggacattgggtaatatgcaaaattatgtcagtaataccaatgca
agtcaagatggaatatccagtggtggtaacaatgtcacccggccaatggagacttggact
caatctaatgatgaccaaagtgtaatggatatggttgggcgaatgccacagattaaaagc
attacagcggttggccatcgtaatcagtgccgagaagtagctcaacaagcatatggtgag
aaatggagtgaggtaagtcgtagcggtgatgactggaacaatggatggaatgatagtggt
ttgcaatgggggaactcaggtgagatgcgttcacagcgtcagccaacaaacatgggacca
gtggacatgtcagcatcattgtcaaaactatctcaggccacaggaagaagcacaccattg
tacgagagacaaagtgaaagaaattctccagcttatagaatgtggcaacaacaacaacaa
caacaacaacaacagcagcaacaacaacaacaacaagagcagcgacaacaacagtctcaa
cagcagccacaacaacctgtgtaccgatattcagtggaaaactacccaaagttgggtagt
cgatctatgtctccactttctcagccacagcaagtgagaatgggagtaccctcatctaca
tctccatcatattcagaagcaagtagcccaacttccccaagtcagcaaggacaggtagct
aaacaagatatcaagacgccgtctggtatgtcctatgctagtgcgttacgtgcacctcca
aaacccaaaccaaagccagtagctgagggtagaggaactgcatcaccggatccactgtca
ttaattaaggatcttaatatcagatcaaataatgatgggtattattcatattttaattaa
DBGET
integrated database retrieval system
