Saccoglossus kowalevskii (acorn worm): 100368978
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Entry
100368978 CDS
T04123
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56-like
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100368978
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100368978
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
Pre-60S particles
Helicases
100368978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
Motif
Other DBs
NCBI-GeneID:
100368978
NCBI-ProteinID:
XP_006815568
LinkDB
All DBs
Position
Un
AA seq
549 aa
AA seq
DB search
MAEVEADSLNFHEMGLDDRLLKAIAQLGWAKPTLIQERAIPLALEGKDLLARARTGSGKT
AAFAIPLIQRILISKQTATEQSIKALILTPSKELSNQASHHIQRPLLIEKPDIIVGTPSR
VLAHIQAKNIYLKESLEMLVIDEADLLFSFGYENDVKTLLRHLPKIFQAFLMSATLSNEV
ETLKKLVLHNPVILKLQESQLPESDRLLQYHIKCKAEDKFLLIYTLIKLKLIRGKTIIFV
NKIDRCYRLKLFLEQFSIASCVLNSELPVNSRCHIVNQVNEGFYDIVIASDESVLSMPDD
KLDELDEIPDATVEADESDNKKKKRKGKKLSKTMMKKVKEYGVSRGIDFQNVSNVLNFDF
PPTVDAYIHRVGRTARGFKMGTALSFVNYSEIHLLQQAEMILSGDDEVPAVKPYQFKMEE
IEGFRYRAKDAMRAVTKVAVKEARLQEIKNEIMNSQKLKTYFEDNPRDLQLLRHDKVLHP
AKVQSHLRHVPDYLVPDTLKQLMPKKYHKAKRRRNVPVEMHSKKKQNALKAVKRKQEDPL
KSFKFKKSK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtagaagcagactcgttgaattttcatgaaatgggtcttgatgaccgcctg
ttaaaggcaatagcacagttaggctgggctaaaccaacactgatacaggaacgtgcaatt
ccactggctttagaaggcaaggacctcttggctcgagctaggacaggctcaggaaagaca
gcagcatttgccattcctcttatccaaagaattcttatcagtaaacagacagcaacagaa
caaagtataaaagctcttatattgacaccatccaaggaattgtcaaatcaagctagtcac
catatacagaggcctttgctgatagaaaagcctgacatcatcgtaggcacaccaagcagg
gtgttagcccatatacaagccaagaacatatacctcaaggagtccctggaaatgcttgtc
attgatgaagctgatcttttattttcctttggttacgagaatgatgtaaaaacattactt
agacatttacccaaaatatttcaagcctttttgatgtcggccacactaagtaacgaagtg
gaaaccttgaagaagcttgtgctgcataaccctgtgattttaaaacttcaagaatctcag
ctacctgagagtgatcgattattacaatatcatatcaaatgtaaagcagaagacaagttt
ttacttatttacacattaattaaattaaaactaatacgaggaaagacaattatatttgtc
aacaagattgacaggtgttacagattaaagttatttttggaacagttctcaattgcatca
tgtgttctgaactctgaattaccagtaaattctcgctgtcacatcgtgaatcaggttaat
gaaggattctatgatattgtgatcgcctctgacgagagtgttcttagtatgccagatgac
aaactagatgaattggatgaaattccagatgcaacagttgaggctgatgaaagtgataat
aagaagaagaaaagaaaaggcaaaaagctatccaagacaatgatgaaaaaagttaaagaa
tatggtgtatctcgtggaattgatttccagaatgtttcaaatgttcttaactttgatttt
ccaccaacggttgatgcctacattcatagagttggaaggactgctagaggttttaagatg
ggcactgctctctcatttgttaattacagtgaaattcacttgctacaacaagcagaaatg
attctgtcaggagatgatgaagtacctgctgttaaaccgtaccagtttaaaatggaagaa
atcgagggatttaggtacagagcaaaggatgccatgagagcggttaccaaggtagctgta
aaggaagccagactacaagaaatcaaaaatgaaattatgaactctcagaagttgaaaaca
tactttgaagacaatccacgagatctgcaattgcttcggcatgacaaagtgctgcacccg
gcaaaagttcaatcacatttgagacacgttccagattatttagtaccggatacattaaaa
caattgatgcctaaaaagtaccacaaggcaaaaaggagaagaaatgttcctgttgaaatg
cacagcaagaagaaacaaaatgcgctgaaagcagtgaaaagaaaacaagaagatcctctg
aagagttttaaattcaaaaagtctaaatag
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