Saccoglossus kowalevskii (acorn worm): 100369027
Help
Entry
100369027 CDS
T04123
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34-like
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100369027
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100369027
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100369027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
Rad17
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
100369027
NCBI-ProteinID:
XP_006815471
LinkDB
All DBs
Position
Un
AA seq
733 aa
AA seq
DB search
MSKHYHKRNDRGRDREHRDDSSDSHARRRYHKRHQHDSKEREQYRERSPAKSGERSRHSR
NEMLTHRKRRRRRSRSSSSSSNESQHTKRGKPKSKDYDDIYRQEIRKERQLSLKGFKTSV
DDPQLISKHEIHEHRIQDIRDVKPDYKPTIDKLPRESSIGQATQFIDLNWMEWQNHKAQL
DSMFFRDQDYIKRGTKDYADFWVFFKKYLQYQNRKEASKEGLSTSRSGSKEMSDVLGLPK
NYDKRYRINTSLRSKYFDHYTRPVSVTGEQDEDKLSKEKVSEFRLALLHYVDFCQKQQFN
KLSKLRRDQGNLPIAQYKDKIINAVRANQVIVVAGDTGCGKSTQVPQYLMAAGFTKIACT
QPRRIACISLAKRVAHETLNEYGSEVAYQIRFETTKNIFTRILFLTEGLLLRQIGSDSTL
SQYSVIILDEVHERHIHTDFLLGVLKCLVQHRKDLKIVLMSATINITLFSNYFSDAPVIQ
VPGRLYPIKLEYVPVGFEEQTGKSERLDPRPYLRIMQRIDNKYDSNERGDLLIFLSGMSE
ISSVSDAAKHYALKTKRWIILQLHSTLSVAEQDKVFDIAPEGVRKCIISTNIAETSVTID
GVRFIADSGKVKEMSYDTQAKMKRLQEFWISRASAEQRKGRAGRTGPGVCFRLYEESEYD
SFQEYTTPEIQREPLDTLILQMIAMGLPNARRLAANHTDIKPPFVISFELSWNCKERGWQ
LLAWGQNLNIFLK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcactatcacaaacggaacgatcgcggtcgagatcgagagcaccgtgacgat
tcgtccgacagtcacgcgagaaggcgataccacaagcgacatcaacatgatagcaaggaa
cgagaacaataccgcgaacgcagtccggcaaagtcgggggaacgcagcagacacagtcga
aatgaaatgttaacacaccgcaaaagaagacgacgacgtagcagaagcagtagtagcagc
agcaatgaaagtcagcacacgaaaagaggaaagcctaaatctaaagactacgacgacata
tacagacaagaaatccgaaaggaaagacagttaagtttgaaaggttttaaaacatctgtc
gatgatcctcagttaatatccaaacacgaaattcatgaacatcgtattcaagatatcaga
gatgtaaaaccagattataaacccacaattgacaagttacctagggaatcaagcatcgga
caggcaactcaatttattgatttgaattggatggaatggcaaaatcacaaagctcagttg
gactccatgtttttcagagatcaagattacatcaagaggggaacaaaagattatgctgat
ttctgggttttcttcaaaaaatatttgcaatatcagaatagaaaagaagcatccaaggaa
ggtctatcaacttccagatctggaagcaaagagatgagcgatgtacttggattaccaaag
aattacgacaaacgatatcgtattaacacgtcactaagatcaaagtatttcgatcattat
acaaggccagtatctgttactggtgagcaagatgaagacaagctgagtaaggagaaggtt
tctgaattccgtttagcgcttcttcattacgtagatttctgccaaaaacaacagtttaat
aagttgtctaaattacgaagagatcaaggaaatttaccgattgcacagtacaaagataaa
atcatcaatgccgtccgagccaatcaagtcatagtggtggccggagacactggatgtgga
aaatcaactcaggtacctcagtatttgatggccgctggtttcacaaaaattgcttgtacc
cagcctcgccgaattgcgtgcatttcattggctaagagagttgcccatgaaactttgaat
gaatatgggtcagaggtcgcataccaaatccgatttgagacaacaaaaaatatatttacg
cggatattgtttttaacagaaggtttgttactacggcagatcggttccgattcaactctc
tcacagtacagcgttatcatcctggatgaagtacatgagagacacatacatacagatttc
ctgcttggagtattaaaatgcctcgtccaacacagaaaagatttaaaaatagtcctgatg
tcagctactattaatatcactttattttctaattattttagtgatgctcccgtaatacag
gttcctggaagactgtatcctattaaacttgagtatgttcctgttggttttgaggaacag
actggtaaatcagaacggcttgatccacgaccgtatctacgcattatgcaaagaatcgac
aataaatacgactctaatgaacgaggtgatttattgatattcctgagtggtatgtctgag
atctctagcgtgagcgacgcagctaaacactatgctttgaagacaaagagatggatcatc
ttacagttacatagtacgttgtcagttgccgaacaagataaagtatttgatattgcacca
gagggtgtcaggaaatgtattatatctacgaatattgccgagacatcagttaccatagat
ggtgttcggttcattgcagactctggaaaggtgaaagaaatgagttatgatactcaagcc
aagatgaaacgattacaggaattctggatcagtagagctagtgctgaacaaaggaaagga
agagcaggaagaaccggtcctggtgtatgttttcgtctgtatgaagaatctgaatacgat
tcgttccaggagtataccaccccagagatacagagagaaccgctagatacattgatactt
cagatgatagcaatgggtttgcctaatgccaggaggttagctgctaatcacacagatatc
aaacccccttttgttatttcatttgagctgagttggaattgcaaagaaaggggttggcaa
ttattagcttgggggcagaatctgaacatttttttgaaatag
DBGET
integrated database retrieval system
