Saccoglossus kowalevskii (acorn worm): 100369326
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Entry
100369326 CDS
T04123
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100369326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100369326
03036 Chromosome and associated proteins [BR:
sko03036
]
100369326
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100369326
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100369326
PBAF complex
100369326
GBAF(ncBAF) complex
100369326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
DUF346
Motif
Other DBs
NCBI-GeneID:
100369326
NCBI-ProteinID:
XP_006818225
LinkDB
All DBs
Position
Un
AA seq
1167 aa
AA seq
DB search
MAARKKDGGADIKFWESGETIAQFDNIRTWLQKNCKKYTQMEPPTNKSLASLVAQLVQFQ
EDNFGRHVSKPALTRLPMKCFMDFKPGGGLCHILSAVYKFKSDQGWRRFDFQSPSRMDRN
VEMFMNIERTLVQNKCLSMPIVFLRSEIDGKLLNRLKDIVTRHRGTITEDEDCATHIVFP
PPSQPVEEDWLRPVVRRDRNTLVHWWYYPDSYDTWAPNSDVDQEPEGTPSHQGEWEVNAK
WLLDLDEFNEWMNEEDYEMQEEGDVKKESGRGRRKGLRAKTACDEVAPSPETDRREKKSA
SSKKRKRSPSPADTKRKKKSGRPSAATKKKPAKEEEPEDYTKDMDDPPETPSVEEVVLPK
VSSSSRSSKDIETQPIKGGSLADLDDTDPMDDSDSRMKSGPATPASEDKSQKVNEVDIKE
DNVTEQTHHIIIPSYAAWFDYNSLHSIERRALPEFFNTKNKSKTPEVYMAYRNFMIDTYR
LNPAEYLTCTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDGDNKVTSMGPPPTSHFTIL
ADTPSGLQPLQPSKTSQQSAAQQVMQFNEPNKDEKTGPDLNNFGLRTDMYASKKAAFVKH
TNRTITSRDWADQETLLLLEALEMYKDDWNKVAEHVGSRTQDECILQFLRLPIEDPYLED
GPGALGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKAAIEEFSKMKDEVPSAL
IDAHIKKVETDVASGVISSKLGLDNSGIAGTGPDGDAGVQTTSHTEGKEKDAAKDEVKST
DKDEKTAKPEVKEEPKEKEETDDEAMDTEETKSEKPEDEEKKVDKEEESEKGDKEEDKKD
AKEAEEKDDKLKEDGEKEKEKDREKDEEEKKRDAEKLSKRELELKEGNISTAAASALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLS
DRQAFHQEQLRAAEMRARQQAQAMAAAGLHQQQQTSQQPPQGVQPVQPAVVQAVHPSQPL
QPTVQQGPQSNQAQSTPPPPPAAVPQEKPAVPEPAPTSGQQTPTTGPATPLTPAGNTQEE
EPQQQQGPGTPSVGSGPGTPNPNQAATPTPPPDLQTGRSTPISGKSTPTSIVSQGNQGDA
SIPFSTSSDAVSSPAAPSPKPMETNSC
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggaagaaagacggaggtgccgatattaaattttgggaatctggagagact
attgcccaatttgataacattagaacatggctacagaaaaactgcaaaaagtatacccaa
atggaaccacccaccaacaaaagcctggctagcttggtggcacagcttgtgcaattccag
gaagataattttggcaggcacgtcagtaaaccagcactgaccaggttaccgatgaaatgt
tttatggatttcaaacctggtggtggtctatgccatattttatctgctgtgtataaattt
aaaagtgatcaaggatggagacggtttgacttccaatcaccatcccgtatggatcgtaat
gttgagatgtttatgaatattgaaagaacgctggttcaaaataaatgtttgtcaatgccg
atagttttcctcagatcggagattgatggcaaacttttaaacaggctaaaagacatcgtc
acaaggcataggggtacaatcactgaggatgaagactgtgctactcatattgtatttcca
cctccatcacaacctgtagaagaggattggcttcgtccagttgtacgacgtgataggaat
acattagtacattggtggtattatcctgacagctatgacacatgggctcctaactctgat
gtagatcaagaaccagaaggcacaccatctcaccaaggagagtgggaggtgaatgctaaa
tggttacttgatttagatgagttcaatgagtggatgaatgaagaagattatgagatgcag
gaagagggtgatgtcaagaaagagtcaggtcgggggagaagaaaaggattacgagctaag
acagcttgtgatgaggttgctccaagtcctgaaacagacaggagagaaaagaaatccgca
tcatccaagaaacgaaagagatctccatccccagctgatacaaagaggaaaaagaaaagt
ggacgtccaagtgcggctaccaagaagaaacctgctaaggaggaagagcctgaggattac
acaaaagatatggatgatccaccagaaacaccaagtgtagaagaagtagttttaccaaaa
gtatcgagtagttctcgttccagtaaagatatcgagactcaacctatcaaaggaggatca
ttagctgacttagatgacacagacccaatggatgatagtgattctaggatgaaatctggt
cccgctactcccgcttcagaagataaaagtcagaaagtgaacgaggttgatattaaggaa
gacaacgtaactgaacaaacacatcatattattataccaagctatgcagcatggtttgat
tataacagtttacattccattgaaagaagagcattaccagaattctttaatacgaagaac
aaatcgaaaacccccgaagtatacatggcatatcgtaatttcatgatagatacttaccgc
ttgaaccctgcagagtatttaacatgtacagcatgtagaaggaatttagccggggatgtt
tgtgcgatcatgagagtacatgctttcctagaacagtggggtcttattaactaccaagta
gatggtgataataaagtaacttcaatgggacctccaccaacgtcacatttcactatatta
gcagatacaccatcaggactacaaccattacaaccatctaaaactagccagcaatctgca
gctcagcaagtaatgcaatttaatgagcctaataaagatgagaaaaccggacctgatttg
aataattttggtcttagaactgacatgtatgccagcaaaaaggcagcctttgtcaagcat
acaaatcgtacaataacaagtcgtgattgggcagatcaagaaacattacttttattagaa
gcattagaaatgtataaagatgattggaacaaagtggcagagcatgttggtagtcgcaca
caggatgaatgtattttacaattcttaagattacccatagaagatccatatcttgaagac
ggtccaggagctctaggtccattggcttatcaacctattccattcagtcagagtggtaat
cctgtaatgagtactgttgcgttcttagcatctgttgtggatccgagagtagcaagtgcc
gctgctaaagctgcaattgaggagtttagtaaaatgaaagatgaggttccaagtgctttg
atagatgcgcacataaagaaagtagaaacagatgttgccagtggagtgatcagttctaaa
ctagggttggataatagcggtattgccggtactggtccagatggtgacgcaggtgtgcag
accacatcacatactgagggtaaagagaaagatgcagcaaaagatgaagtcaagtcaacg
gataaagatgagaagactgctaaacctgaagttaaagaagaacctaaggagaaagaagag
acagatgatgaagctatggatacggaggaaactaaatcagaaaaaccagaagatgaagaa
aagaaagtggataaggaagaagaaagtgagaaaggagacaaagaagaagacaaaaaagat
gccaaggaagcagaagagaaagatgataaattgaaagaagatggagagaaagaaaaggag
aaagatagggagaaggatgaagaggaaaagaaaagagatgctgagaagctgtcaaagagg
gaattagaactgaaagaaggcaatatatcaactgctgctgcatcagcactggcagctgca
gcggttaaagctaagcatttagcagcggttgaggaacgtaaaataaagagtctagtcgcg
ttgttagtggaaacacaaatgaagaaactggaaataaagcttcgtcattttgaagaattg
gagacaatcatggatagagaaagggaagcacttgaataccagagacagcagttattatct
gacaggcaagcattccaccaggaacagttgagagcagcagaaatgagagcacgacagcaa
gcacaagccatggctgctgctggtttacatcaacaacaacagacatcacaacaaccacca
caaggagtacaaccagtacaaccagctgttgtgcaagctgtgcatccaagtcaaccattg
caaccaactgtacaacagggtccacagtcaaaccaagcacaaagtacaccaccgccacca
ccggccgcggtaccacaggaaaaacctgcagttccagaaccagcaccaacatcaggtcaa
cagacgcctacaactggtccggcgacaccgctaacaccagctgggaatactcaagaagaa
gaaccacagcagcagcaaggaccaggtacaccgtcagtgggtagtggaccaggtacacca
aacccgaaccaagcagcaacaccaaccccaccacctgatctacagactggtagatctaca
ccaataagtggtaaaagtacaccaacatcaattgttagtcaaggtaaccaaggtgatgca
agtataccattctccacatcaagtgatgcagtatcatctccagcagctccttcacccaaa
ccaatggaaacaaattcttgctag
DBGET
integrated database retrieval system
