Saccoglossus kowalevskii (acorn worm): 100369470
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Entry
100369470 CDS
T04123
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sko04812
]
100369470
Cytoskeleton proteins [BR:
sko04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100369470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD_LRWD1
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_WDR11_2nd
WDR54
Beta-prop_DCAF12
Beta-prop_VPS8
VPS8_N
Beta-prop_LRRK2
Cytochrom_D1
PROPPIN
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
100369470
NCBI-ProteinID:
XP_006816983
LinkDB
All DBs
Position
Un
AA seq
690 aa
AA seq
DB search
MAATKRAWKLQDFVAHSANVNCLALGPKSGRVMVTGGEDKKVNMWAVGKPNCIMSLSGHT
SPVESVRFGNTEELVAAGSQSGTIKIWDLEAAKIVRTLTGHKSSIQTLDFHPYGEFVASG
SFDTNVKLWDVRRKGCIYTYRGHTNRINSVRFSPDGRWVASAGEDGLAKLWDLAAGKLIN
EFKHHTGPVNNIEFHPNEFLLATGSADRTVKFWDLENFNLVGTTDKEASPIRCILFHQDG
NVLFSGGQDSLHVYSWEPVKCFDSYSMGWGKVADMTTSSNQLIGASYSQSNVSLFVVDLA
RTNMSGDISHVEQPSKPVQQQIPFTASGHRKNFVTERPHTQCSGGDQGAEMKTEPEEEQT
QDHGEDDQSPAQIENPDDYRELFQPRKHLARSPPKEPFPAPLADPVPVAVVPANNQQNVT
RPVTQSVSRPVTQSVSQTHSSPPRQEPEAPVHQPPPAAPVHQPPPAAQHHPVSNVIPSDR
DKPVGLDMNAFLPKQPQHSVAPSSSVNNANIGPPEVSESEIISAIEKGHGSMCSVLTSRH
KNLDVVRSIWTSGEIRTALESAINMNDLAIIVDLLNVMCLKTSLWKLDLCVVLLPKIEEL
VESKYENYILTSCQAIKLIMKSFSQLIKSNITSPPLSGVDISREERYNKCKKCYDSLVNI
RYIIEQKQHLVGKIGSTFREVKLILGGLDS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgaagagagcatggaagttacaggactttgtagcgcattctgccaatgtc
aactgtttagctctgggcccaaagagtggccgagtcatggtgactggaggggaagacaaa
aaggttaatatgtgggctgtaggcaaaccaaactgtatcatgagtctgtcaggtcatacc
tcaccagttgaaagtgtacggtttggtaatactgaagaacttgtggcagctggctcccag
tctggaacaataaaaatatgggacttggaagctgcaaaaattgttcgaactctgaccggt
cacaagtcaagtattcagaccttagattttcatccatatggggaatttgtggcttccggt
tcatttgacaccaatgtaaaattgtgggacgttagaagaaaaggttgtatatatacatat
agagggcatacaaatcgtataaatagtgtcaggtttagtcctgatggcagatgggttgca
tctgcaggagaggatggccttgctaagctatgggatttagctgccgggaagctaataaat
gaattcaaacaccatactggacctgtaaataatattgaattccatcctaatgagtttctt
ctggcaacaggaagtgcagacagaactgtgaaattttgggatttagaaaactttaacctt
gttggtacaacagataaagaagctagtccaatcaggtgtatactatttcatcaagatggt
aatgttttatttagtggaggccaggactcactacatgtatatagctgggaaccagtcaaa
tgttttgattcatactcaatgggatggggtaaagttgcagatatgacgacttcttctaat
caattaattggagctagttatagccagagtaatgtgtcactctttgttgtagatttagcc
agaactaatatgtcgggtgatatttcacatgttgaacaaccaagcaaacccgtacaacag
caaatacctttcactgctagtggacatcgaaaaaattttgtaacagagcgaccacataca
cagtgtagcggaggtgatcaaggcgctgaaatgaagacagagcctgaagaagaacagaca
caagaccatggagaggatgatcaaagtccagcacagatagaaaacccagacgactataga
gaactatttcaaccaaggaaacacttagctcgatctccgccaaaggagccattcccagca
cctttagccgatccagtacctgtggcagttgtaccagctaacaaccaacaaaatgtcaca
agaccggtcactcaatcggtctctagaccagtcacccaatccgtcagtcaaacacattca
tcaccaccaaggcaagaacctgaagcaccagtgcatcagccgccacctgcagcaccagtg
catcagccgccacctgcagcacagcatcatccagtttctaatgtcataccatctgacaga
gataaacctgtaggtttagatatgaatgctttccttcctaaacagccacagcacagtgtg
gctccatcaagttctgtgaacaatgctaacataggacctcctgaagttagtgaaagtgag
atcatctcagcaattgaaaaaggtcatgggtcaatgtgttcagttctcacaagtaggcat
aaaaatcttgatgttgtcaggtctatatggacatcaggtgaaatcaggactgctctagag
tctgccatcaatatgaatgatttggcaattatagtagacttactcaatgttatgtgtctc
aaaacgtcactatggaagctagatctttgtgttgtactgctaccaaaaatagaagagctt
gttgagagtaaatatgaaaattatattcttacaagttgtcaagccattaaacttatcatg
aagagcttttctcaacttattaaatcaaatatcacatctcctccgttatcaggagtagat
atttcaagagaagaacggtacaacaaatgcaagaaatgttatgatagcttagtaaatatt
agatatattatagaacaaaagcagcatctagttggaaagattggcagcacattccgtgaa
gtcaaactgatcctcggtggacttgactcgtaa
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