Saccoglossus kowalevskii (acorn worm): 100369596 Help Entry 100369596         CDS       T04123                                  Name (RefSeq) 5'-3' exoribonuclease 1-like   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism sko  Saccoglossus kowalevskii (acorn worm) Pathway sko03008   Ribosome biogenesis in eukaryotes sko03018   RNA degradation Brite KEGG Orthology (KO) [BR:sko00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     100369596   09123 Folding, sorting and degradation    03018 RNA degradation     100369596  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sko03019]     100369596    03009 Ribosome biogenesis [BR:sko03009]     100369596    03016 Transfer RNA biogenesis [BR:sko03016]     100369596    03036 Chromosome and associated proteins [BR:sko03036]     100369596 Messenger RNA biogenesis [BR:sko03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      100369596   mRNA degradation factors    5'-3' decay     5' exonucleases      100369596 Ribosome biogenesis [BR:sko03009]  Eukaryotic type   Pre-60S particles    RNases     100369596 Transfer RNA biogenesis [BR:sko03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     100369596 Chromosome and associated proteins [BR:sko03036]  Eukaryotic type   Gene silencing    piRNA pathway     100369596 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 dsrm LIX1 Motif Other DBs NCBI-GeneID:  100369596 NCBI-ProteinID:  XP_002730377 UniProt:  A0ABM0GI77 LinkDB All DBs Position Un AA seq 2104 aa AA seqDB search MGVPKFYRWISERYPCLSEVVRENQIPEFDNLYLDMNGVIHVCSHPNDDDPHFRISEEKI FKDIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSARAAEEQEKKALSKGE TLPTEKRFDSNCITPGTEFMVKLNEQLKYFVNKKITEDEMWRGLRIYLSGHETPGEGEHK VMEFIRAEKADPKYDPNTRHCLYGLDADLMMLGLTSHEPHFSLLREEVRFGKKSQQKRTP TPEETTFHLLHLSLFREYLEFEFQDVKGKISFDYDLERIIDDWVLMGFLVGNDFIPHLPD LHINHDALPLLYKTYIEVLPLVDGYLNEDGILNLKRFEVYLKKLSEFDRNKFSETSVDLK YFEGKKGSTEGSAWKGQRIKKREEKKEALRAAKNLAQASMFQVLSTTEESEDSSDNGNKN SVETLFDEETKLDADVDEAEIFEMEFRQHKRNYYQTKLGYENVTEEVLKDQALCYVTGIQ WILHYYYNGVQSWGWYYPHHYAPFMSDVCGFSDCELKYDIGRPFKPFEQLLAVLPAASGE LLPKPFQSLMIMDNSPIIEYYPVDFDTDLNGKQQDWEAVVLIPFIDEKCLLDAMAPLNNI LTDEEKRRNSHGPHLLYTYDKELSFCYPSSLPGVFTDINCSHAKCEEVPLDAFRIDISKM RKGLLVGTKQGVFYPGFPTMRHVPHKAQLKKEGVKVFQMNSRGDNMMLYIMNDSEPEIEK VANELLGKTIFAGWPHLQEVRVVSVTDDQFRYELKESKSKNPAHNGTSEIICYEQSDREA ARWVKEVQSITEHYRGRKGVEIGQTFVIVYATPMAGRRYVCGAGGLITLEKQWESTPTTF ALQTTVKDIAAYDPSFKQFSNLEDLFPPESECFMLGTPHYGCMGEVIEVDRKGEPRIRVV FSTPSEPRLDHIMKQQWKYEVKYVPGYILAQRLGISSHLVSRITGSFLVLKGSSRSGNPN PSKVNIGLNLKFNKRNKEVAGFTRKDEDGNWTYSIKTQHIIADYIEKFPDLFDHVSQNAQ NDMFYEDDVFGEDSDRASQISDWLKTLSCHGVEQTEVGLKSLDENVVKAIQEEMEKNKQN KTKRKLKMSVKPYLLFRPVDQQGHLIPDPDADYELFDRVINVRDGFTVPLGLRGVVTGII SAVRPADILYEVIFDDEFLDALVIRGSGARGYHMPPSSLINISYGMRKEHSQECGMQKPM AVVKPQTAPEKMQSMGWYSDMVKSAGSSSPDNRRGFYSPRINHSPNSPFVPSQIYRRSGQ GSGNVSFGQVNTDRRGQQSAPQHSQNRQYNNPPNSSKKILKRQAPQQTSQWNSPQGQNLS PRQQDLPPRLQKQNQQRSQHLQQQDIPPRFQRQQQTPCDKNTEKDEITKPAAEDDVNEFA NIWKSLQDPISTPSQESMPLPIATETSAPSSEKLPIQASSSPISTSLAQAAAALPIKSAQ EERERLQKNQELVAGQQKEIVLQHRTPHKKIQLKTRSVHALRREEEMKEQSVDELAPILT SLHLETDAGPPSSTVTITNSQFEQEKAEVVEDIRKSPGTIAKESTEAICKLLNIGSAPLQ EEEKPVSPYGQPVEISTLFQEAQNSMQTPSSVTKTTQPVIVSSQPTAIYTMHHAAGVSST TTSVTTQPGFLTSEPQLVSSQPGTLVSQPTFVQMSSHAMSVSSQPRQVTSQPVALTSQPM ILTNQPMPNPLMQARSVSSRPMVLPSQPMSMPQPRPVTMQTAVSSMQPMSLSAHPVPMSI SQPMHVPSQPVSMISQPMPMSQTRHMPSQPVTLSSQLVSPHSLPQPIPLSSQSVSSQHIQ GAMVQPQSPGIHATTVIPQPQQNSVMELFHWCKKQKYPPPTYTFHNTPQGLWVCTVRLVS GVTYNGIPCNSKDHSCASAASVALTNVVMNQPQRYSQSPRGQHSQYIQSPRQPQPQQHAV SPHMVPVRSPHGVAIRGGPYMQYQQPTSRMQMSARMQGSPYLPQQQPSPQYYHHNQPRPG SYSHQYQQISLHQPVMSMDYGQQPPLGTVPQSYINSNPFIPPQVARMQVTPVKSKSMDET RDAVDDTNQSSNTLSQVAMETVQKIEDPELIDQSTTQKSNPTPRKGRKGGKRQANLAINF SGLS NT seq 6315 nt NT seq  +upstreamnt  +downstreamnt atgggagttccgaaattttaccgatggataagcgaaagatatccctgtctaagcgaagtt gtacgagagaaccagattcctgagtttgataatctttatcttgatatgaatggtgtgatt catgtgtgctcgcatcccaacgacgatgatccacattttagaatatcagaagaaaaaata tttaaagatatatttcattatattgaggtactgttccgaattatcaaacctcgtaaagtg ttttttatggctgtggatggggttgctccgagagccaagatgaatcaacagagagggaga cgtttcagatctgcacgtgcagcggaagaacaagaaaagaaagccttgtcgaaaggagaa acgcttcctacagaaaaaagatttgattctaattgcatcacgcctggtactgagttcatg gtaaagctgaatgaacaactcaaatatttcgttaataaaaagattactgaagatgaaatg tggcgtggtttaaggatatatttatcgggtcatgagacacctggggaaggtgaacataaa gtgatggagttcattagagctgaaaaagcagatcctaagtatgatccaaacacaaggcat tgtctgtatggtctagatgctgatttgatgatgctcgggctgacatcgcatgaacctcat ttttcactactgagagaagaagtacggtttggaaagaaatcccaacagaagagaacacca actccagaagaaacaacttttcatttacttcatttatcattatttcgagagtacttagag tttgaatttcaagatgttaaaggtaaaatatcatttgactatgatttggagaggattatt gacgattgggtactaatgggattccttgttggtaatgatttcatacctcatctgcctgat ttgcatattaaccatgatgcactgcctctactatacaagacatatatagaagtgctacca ttagtggatggttatttgaatgaagatggaattcttaacttgaaaagatttgaagtctat ttaaagaaattgtctgaatttgacagaaataaatttagcgagacgtctgttgatctgaaa tatttcgaaggtaagaaaggaagcactgaaggcagtgcttggaaaggacaacgcataaaa aaaagggaagagaagaaagaggctctacgtgctgcaaaaaatttagcacaagcttccatg ttccaagtattatcaacgactgaagagagtgaagattcatcagataatggaaataaaaat tcagttgaaacattgtttgatgaggagacaaagcttgatgctgatgttgatgaagcggaa atttttgaaatggaattccgtcaacacaagagaaattattatcaaaccaaactcggatat gagaatgtgacagaggaagtgttaaaagatcaagcgttgtgttatgtcactggtatccag tggattcttcactattattacaacggtgttcagtcatggggctggtattatcctcatcac tacgccccgttcatgtccgatgtatgcggttttagtgattgtgaattaaaatacgacatc ggtagacctttcaaaccatttgaacaattactagcagtactgccggcagccagtggagaa cttctacccaaaccattccagtctttaatgatcatggacaattcacccattatagaatac tatccagtagactttgatacagacctcaatggtaaacaacaggactgggaagctgtagtc ttaataccatttatagatgagaaatgcttactagatgccatggcaccattgaacaatatt ctgacggacgaagaaaaacgacgtaattcgcacgggcctcatttattgtatacttacgat aaggagttgtctttttgttatccgtcctcgttaccaggtgtatttactgatataaactgt agtcacgcaaagtgtgaggaagtaccgctagatgcattccgtattgatattagtaaaatg aggaaaggtttgttagttggtacaaagcaaggagtcttttatccaggatttcccacaatg aggcatgtaccacataaagcccagttgaaaaaagaaggtgtgaaagtttttcaaatgaat agtcgtggtgacaatatgatgttgtatatcatgaatgactctgagccggaaattgaaaaa gttgcaaatgaattgctcggaaaaaccatatttgctgggtggccacatttgcaggaagta cgggttgtttcagtaacagatgatcagttcaggtatgaactgaaggaaagtaaaagtaag aatcctgctcataatggtacaagtgagataatatgctatgaacaatcagacagagaggct gctagatgggtaaaagaagtacagtctattacggaacattatcgtggtagaaaaggcgta gagattggtcagacgtttgtaatagtgtatgctacaccaatggctggtaggaggtatgtg tgtggtgcaggtggccttatcacattagaaaaacagtgggaatcgactcccactactttt gcacttcaaacaacagtcaaggatatagcagcttatgatccgtccttcaaacagtttagt aacttagaagatttatttccacccgagtcagagtgttttatgcttggcactccacactat ggatgtatgggagaggttatagaggtggataggaaaggtgagccacggattagggttgtt tttagtacgccatcagagccaagattagaccacattatgaagcagcagtggaaatatgaa gttaaatacgtcccaggttatatcctagcacagcgactgggaatatcaagtcatctagtc tcaagaattacaggctcattcttggttttgaaaggatcaagtagaagtgggaatccgaat cctagcaaagtaaacataggcttgaatttgaagttcaacaagaggaataaagaagtagca ggttttactcggaaagatgaagacggcaattggacgtattccatcaaaacacaacatatt attgcagactatattgaaaagttcccagatttatttgaccatgtgtctcagaatgcccaa aatgacatgttctatgaagacgatgtgttcggtgaagatagtgaccgggcatcacagatt tctgattggctgaagacgttgtcatgtcacggagttgaacaaacagaggttggattgaaa tctttggatgaaaatgttgttaaagctattcaggaagagatggaaaaaaacaagcaaaat aagacaaagagaaaacttaagatgagtgtcaaaccgtatttgctgttccggcctgtagat cagcagggacatctcataccagacccggatgccgactatgaattattcgatagagtcatt aacgtacgtgatggtttcactgttcctctgggtttacgtggtgttgtaactgggataatc tcagctgttagacctgctgatattctctatgaagtaatatttgatgatgagtttctggac gcattggttatacgtggtagcggtgcccgtggctatcacatgccaccctcctcgttgatc aacatctcgtatggcatgcgcaaagagcatagtcaggaatgtggcatgcagaaacccatg gccgtagtaaaaccgcagacggcgcctgaaaaaatgcagagtatggggtggtattctgac atggtcaagtcagccggttcatcatcgccagacaacaggagaggattttacagtccaaga ataaatcattcaccaaattcaccatttgtacccagtcagatttacaggagaagcggtcaa ggatctggtaatgtcagttttggtcaggtcaacactgatagaagaggtcaacaaagcgct ccccagcatagtcaaaatcggcagtacaacaacccacctaactccagcaagaaaatacta aaacgacaggctccccagcagacatctcaatggaattctcctcagggtcaaaatttatcg ccaaggcaacaagatttgcccccgagactacagaaacaaaaccaacagagatcacagcat ttgcagcagcaagacatcccacctagatttcaaagacagcaacaaaccccttgtgacaaa aatactgaaaaggatgagataacaaagcctgcagctgaagatgatgttaacgaatttgca aatatatggaaatcactgcaagaccccatatcaactccatcccaggaatcaatgccattg cccatagcaacagagacaagtgcaccatcatcagagaaactaccaatacaagcatcttca tcaccaatatcaacatctcttgcacaagctgctgcagctcttccaatcaagtcagcacaa gaagaaagagaaagattgcaaaaaaatcaagagttagttgccgggcaacagaaagaaatt gttcttcagcatcgtactccgcacaagaagattcagcttaagacaagatcagtgcatgct cttaggagagaagaagaaatgaaagaacagtctgtggatgagctggctcctattttgaca tcgttacatctagaaacagatgctgggcctccatcttccacagtgacgataacaaacagc cagttcgaacaggagaaagccgaggtggtagaagatataagaaaatctccaggcactatt gcgaaggaaagcactgaagcaatttgtaaactgttaaatattggtagtgcccccttgcaa gaagaagagaagcctgtcagtccatatggccaaccagttgaaatctccacactctttcaa gaagcacagaattccatgcagacgccatcatctgttactaagacaacacagccagtgata gtctcttctcaacctacagctatttatacgatgcatcatgcagcgggtgtgtcatctacg acaacgtcagtaactacgcaaccaggatttttgacatctgaaccacagctagtgtcatca cagcctggaacactggtttctcaaccaacgtttgtgcaaatgtcatcacatgccatgtct gtgtcgtcacagccgagacaagtgacatcacaaccggtagcattaacttcccaaccaatg atattgacgaatcagccaatgccaaatccattaatgcaagcacgatctgtgtcgtctcgc ccaatggtattaccatcccaaccaatgtcaatgccccagccaagacctgtaacaatgcag acagcagtctcatctatgcagcccatgtcactatcagcccatccagtcccaatgtcaata tcacaaccaatgcatgtaccatctcagccagtgtctatgatttcgcaaccaatgccaatg tcacagactagacatatgccatctcagccagttacactctcatctcagctggtgtcacca cattcattaccacagcctatcccgctgtcttctcaatctgtatcctctcaacatatacaa ggtgccatggttcaaccacagagtcctggtatccatgctactactgttatacctcagcca caacagaattcagtcatggagttgttccattggtgcaagaagcagaagtatccaccacca acatacacttttcataatactcctcaaggtctatgggtgtgcacagtgagattagttagt ggagtaacgtacaatggtataccatgtaacagcaaagatcattcctgtgcaagtgctgcc tctgtggcactcactaatgtagtgatgaatcagccacagagatattcacaatcaccaaga ggtcaacattcacagtatatccaatcaccacgacaacctcagcctcagcagcatgcagtg tccccacatatggtaccagtacgatccccacatggtgttgccattcgtggtgggccatat atgcagtatcaacagccaaccagcagaatgcagatgagtgcaagaatgcaaggatcgccg tatctcccacagcaacaaccatcaccacagtactatcatcacaatcagccaagaccaggg tcctattctcatcaatatcaacaaatatcactacatcagcctgtgatgtcaatggattat ggacaacaaccaccattgggtactgtaccacagtcttatatcaatagtaatccatttatt cctccacaggtagctaggatgcaagtaactcctgttaaaagtaaatccatggatgagact agagatgccgtagatgacacaaaccaaagtagcaacacactctcacaagttgctatggaa actgtacagaaaatcgaagacccagaactcatagaccaaagcaccactcaaaaaagtaat cctactccacgaaagggaagaaaaggtggaaaacgtcaggcaaatttagccattaatttt agcggtttatcatag

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