Saccoglossus kowalevskii (acorn worm): 100369735
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Entry
100369735 CDS
T04123
Symbol
NCBP1
Name
(RefSeq) nuclear cap binding protein subunit 1, 80kDa
KO
K12882
nuclear cap-binding protein subunit 1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
sko03015
mRNA surveillance pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100369735 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
100369735 (NCBP1)
03015 mRNA surveillance pathway
100369735 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100369735 (NCBP1)
03041 Spliceosome [BR:
sko03041
]
100369735 (NCBP1)
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100369735 (NCBP1)
Spliceosome [BR:
sko03041
]
Common components
Common spliceosomal components
Cap binding complex
100369735 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Motif
Other DBs
NCBI-GeneID:
100369735
NCBI-ProteinID:
XP_006823982
LinkDB
All DBs
Position
Un
AA seq
757 aa
AA seq
DB search
MSRRRNYSDDDEGGRPRKRRRTTSDHTEIEDRLESLITRVGEKSTSSLESNLEGLASVLE
ADLTSYKPKITKILATCATFFPEKISVYSTLVGLLNARNYNFGGEFVENIFRALRDALKV
GEFEKARILLRFLTDLVNCHVIDLTSMLVMYEAFVAVTSEDDIPQVRSDWYMYAVMSSLP
WIGRELHDKKEMEFEKLLSNIEKYINKRKKQYFPFLKVWEKDVPHPQEEYLDCLWAQLTK
LKNDKWIERTILRPYLAFDSVLCEALQHTLPPINPPPHTDEMEYPLPKVIFRMFDYTDAP
EGPHLPGHHAIDRFLIEETLSQIIHTHHKERKECAAQLVSYHGKNIVPLNYMIIEVVFGQ
LFNLPQPPYLEIFYASLLIELCKLQPSSLPQVLAQATELLYERVDYMNVTCVDRFVTWFS
HHLSNFQFRWSWEDWGECISMNPETPKPKFVKEALEKCMRLSYHQRIVESVPENYAQLIP
EKPSPIYKYSAIGSGSLPGTIPANQLIASIKNKATPDEVLDILKDIPNPKQDEEQMEDES
SFNPLKIDVFVLTVLHMGSKSFSHSFSALAKFHPVFKALADGEESQMYMLGKVYEIWQNH
HQMMGVLIDKMLRTQIVDCASVANFLFSKDMENDFTRLYVWEIMHSTIRKMNKHENRIEK
ELQEARAKLDQHVRACQNYFLQRFIIILSEHLVKCENEGKDCDTPWYKQVKGRLQQIFLT
HYQQVEKYITTLETLLFTADIDQHILEVFQQFRALRM
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccgaagaaactacagcgatgatgacgaaggtggacgtcctcgtaaaagacgc
cggactacctcagatcacactgagattgaagacagattggagtctctgatcactagagtt
ggagagaagagtacttcttccttagagagtaacttagaaggattggctagcgtcttagaa
gctgacttgacctcttataaacccaaaataacaaagattcttgcaacatgtgcaacgttc
ttccctgagaagatcagtgtatacagtacattggtcggtctgctaaatgcgaggaattat
aattttggaggcgagttcgtagaaaatatattccgagctctgagggatgcattgaaagtt
ggagaatttgagaaagcgcgtattttgctgagatttttgaccgatttagtgaattgccat
gtaattgatttaacatcaatgttggtgatgtacgaagcgtttgtagcagtgacctcagaa
gatgatattcctcaagtgcgtagtgattggtatatgtatgctgtgatgtcatcgttgccg
tggattggacgagagttgcatgataagaaggagatggaatttgagaagttactttcaaac
attgagaaatacattaacaaacgtaagaaacagtattttccatttttaaaagtatgggaa
aaggacgtaccacacccccaagaagagtatttggactgtttgtgggctcaacttacaaaa
ctgaagaacgataaatggattgagcggacaattctgagaccctaccttgcgtttgacagt
gtgttgtgcgaggcgctacaacacaccctcccaccaatcaacccacccccacacacagat
gaaatggaatatcccttacccaaagttatatttaggatgtttgattatacagatgcaccc
gagggaccacacttgcctggacatcatgccattgatagattcctcattgaagaaacgttg
tcacagattatacatacacatcataaggaaagaaaagaatgtgccgctcagcttgtcagt
taccatgggaagaatatagtgccgctgaattacatgataattgaagttgttttcggtcag
ctattcaacctgcctcagccgccttatctcgagatattttatgcgtctttactcattgaa
ttgtgtaaactgcagccgtcttctcttccgcaagttcttgcacaagccactgaattactc
tatgagcgtgttgattacatgaatgttacctgcgttgatagatttgtcacatggttctct
catcatctcagtaattttcaattccgttggagttgggaggattggggagaatgtatcagt
atgaatccggaaacacctaagccgaagtttgtcaaggaagctttagagaagtgcatgaga
ttgtcgtatcatcaaagaattgttgaatctgtacctgagaactatgcccaattaatacca
gagaaaccttctcctatttataaatacagtgctattggaagtggttcattaccgggaact
attccagccaatcagctgattgcatcaattaaaaataaggctactccagacgaggttctc
gacattctcaaagatatacctaaccctaaacaggatgaggaacaaatggaagacgagtca
agtttcaaccctctaaaaatagacgtatttgtgttaactgttctacatatgggtagtaaa
tcattcagtcattcctttagtgccctagccaaatttcatccagtgttcaaagcgttagct
gatggtgaggagagtcagatgtatatgttgggtaaagtttatgaaatctggcaaaatcat
caccagatgatgggtgtactcattgataagatgctgaggactcaaattgtggactgtgcc
tctgtagcaaattttcttttttccaaggatatggaaaatgattttaccaggttgtatgtt
tgggaaattatgcattccacaatccgcaagatgaataaacatgaaaaccgaattgagaaa
gagctccaggaggccagggctaagttggaccaacatgtacgtgcatgtcaaaattatttt
ttgcagcgctttatcattattttaagtgaacatctagtgaaatgtgaaaatgaaggtaaa
gattgcgataccccatggtacaaacaagttaaaggaagacttcaacaaatattcttaacc
cactatcaacaagtggagaagtatatcaccacacttgagacgttactctttactgccgac
attgaccagcatattctggaagttttccaacagttccgagctctgcggatgtaa
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integrated database retrieval system
