Saccoglossus kowalevskii (acorn worm): 100370074
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Entry
100370074 CDS
T04123
Symbol
UBE4B
Name
(RefSeq) ubiquitination factor E4B (UFD2 homolog, yeast)
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04120
Ubiquitin mediated proteolysis
sko04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100370074 (UBE4B)
04120 Ubiquitin mediated proteolysis
100370074 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sko04121
]
100370074 (UBE4B)
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100370074 (UBE4B)
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
U-box type E3
100370074 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
100370074
NCBI-ProteinID:
XP_002737351
UniProt:
A0ABM0GU16
LinkDB
All DBs
Position
Un
AA seq
1150 aa
AA seq
DB search
MSELTPDEIRRRRLARLGGGSSSSSNSSSSTPTSSKSVQETSQSQSPPVAQSPSSSPLMP
SGASNVVRRLPDTPPMEGDQAMSDSVTQEAQSMDTDNFTQSMDMDLESCEKSTLSQMDVD
SGIETQEMEDVERKERKVLSQKESSVTGEVTEDQLVTTVCRIFRTSWKEKGRDLIFLPQL
SQEFQQDPQQVYIDLKDLINQILIEVLTNHCRGENRLPSLTADGLQPRLSTSNNKGYSPS
PPSFSLSVPSPSSTAGDSGSERFNIEDCKETEMLNYLMECFDRVSMEERNTPKKSSQPPL
SSVLNDIRTQCACHAALVLQGAFTQPRISSKPSWIVPYQLCRVLPRGFLYELVHVTNQDE
ATFTAVFTPVLLGLAQAVQRCGLDSDNFKYPLMALSELCEIKLGSRRPICTLMTSLPCWL
PKPITNAVGRELQRLSFLGSFFSLSVFAEDDSRLVDKYFSGAVTVDNCRLINATLQTSLE
TARNELFKVLHCILVNSETREAGLDYIANVINKNHKKAQMQADDSLLCNDGFMLNFLHVL
QQLSVKIKLDKVDPVYLHHAKCRIDLSQDTRLKATVQEVSDWKKSIDAWSDPKFTTECYF
LTLHCQHLALLPCTRHYTRRVRALRELGRMIEELMAQEVNWKGTPLAKRNRQLLEKWKTQ
HKKLVRAKACADAGLLDESLLRRCLSFYGSVVQFLTSLMTTKKGAEITLPLPQEVPMLYA
SLPDYYAEDIAETLLFILQHMPHVLEDTSLPDIVTFIIMIVCSSHYLSNPYLVAKFVELM
FVVNPAIHDRTRNVHNMIVNHPLAALHLAPALMRFYTDVETTGSSNEFYDKFSIRYHISI
IFKSLWNIPLHQQAIIQETISGKDFVRFVNMLMNDTTFLLDESLDCLKRIHEVQELIKNK
EIWDKMTQDEQEGKRRQLSTDERQVRSYLTLAGETLDMFHYLTQKITEPFLRPELAVRLA
AMLNFNLQQLCGPKCNDLRVENKEKYGFEPKKLLDQLTDIYLHFSDCPKFAEAVAADERS
YRKEVFDVALGVMSRANIKIESDIQRFRDLASVVDKIVISNLKKDIDFEDAPDEFKDPLM
DTLMTDPVLLHTSGNIMDRPIIERHLLNSSTDPFNRQALDSEDLQPMPELKARIQQWMRQ
TQMLKRKQDK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactaactccagacgagattcgtcgccgtagactggcacgtttgggtggtggc
agtagtagtagtagtaatagctcatcttccacccctacgtcatcaaaatctgtacaggaa
acttcacagtctcaatcaccacctgtagcacagtcaccgagcagttcaccgctgatgcca
tccggtgccagcaatgtagtaagaagactaccagacacacctcctatggagggtgatcag
gccatgtcagattcagtgacacaagaggcacagtctatggatactgacaatttcactcaa
tccatggatatggacttagaatcatgtgaaaaaagtaccttatctcagatggatgtggat
tctgggatagaaacgcaggaaatggaagacgttgaaagaaaagaacgcaaagtcctgtca
caaaaggaatccagtgtaactggtgaggttacagaagaccagttagtaaccacagtctgt
cgtatattccgtacctcatggaaagaaaaaggaagagatctaatatttctaccacaacta
tctcaagaattccaacaggatcctcaacaagtttacattgatttaaaagatttaataaat
cagattctgattgaagtgttaaccaatcactgtaggggtgaaaatagactccctagctta
acagcggatggtttacaaccaagattatcaacgtctaacaataaagggtattcaccgtct
ccacctagttttagtctttctgtaccaagtccatcatcaactgctggtgactctggaagt
gaacggttcaatattgaagactgcaaagaaactgaaatgttgaattatttaatggaatgt
tttgatagagttagcatggaggaaagaaatacaccaaagaaatccagccagcctcctttg
agcagtgttttaaatgatattcgtacacagtgtgcatgccatgcagcattggtattacag
ggtgctttcactcaacctaggatatccagtaaaccgtcatggattgttccatatcagcta
tgtcgggttttaccacgtggatttttgtacgagttagttcatgtcacaaatcaagatgaa
gcaacttttacggcagtatttactccagtgttgttagggttggcacaggctgtacaacga
tgtggattagattctgataactttaaatatccattaatggcactgagtgaactttgtgaa
ataaaactaggatcaagaagaccaatttgtactttgatgacctctctaccatgttggctt
cccaaaccaatcacaaatgctgttggaagagaacttcaacgactttcattcttgggttca
ttttttagtctctctgtgtttgctgaggacgattcaagactagttgataaatatttttct
ggagctgtgactgttgataattgtcgccttataaatgcgacactacagacatcactggaa
acagctcggaatgaactgtttaaggtgctacattgtattttagtgaactcagagaccaga
gaagctggtcttgattacatagcaaatgtcatcaataaaaatcataaaaaagctcagatg
caggctgatgacagtttattgtgcaatgatggttttatgttgaactttttacatgtactt
caacaattaagtgtcaaaattaaattagataaggttgatccagtatatttacatcatgcg
aaatgtcgcattgatctttcccaagatacaagacttaaagctacagtgcaggaagttagt
gattggaaaaaatcaattgacgcttggtctgatcctaagtttactacagagtgttatttt
ctgacattacactgtcagcatcttgcgttgttaccatgtactaggcattatacacgcaga
gtcagggcattacgagaattgggacgtatgattgaggagttgatggcacaggaagtgaac
tggaaaggaacaccactcgcgaaaagaaaccgccaactgctagaaaaatggaaaacgcaa
cataagaaacttgtccgagccaaagcatgtgcagatgctggtttattagatgaatcctta
ttgcgaagatgtttatcattctacggcagtgtcgtacaatttcttacaagtttgatgaca
actaagaaaggagcagaaataactctgccattgccacaagaagtaccaatgctgtatgcc
tcgttacctgattactatgcagaagatatagctgagactttattatttattttacaacat
atgcctcatgttttggaagacacatcgctaccagacatagtgacctttattatcatgatt
gtgtgttcatctcattatctcagtaacccatatttagtggcaaaatttgttgagttgatg
tttgttgttaatccagcaattcatgatagaactcgtaatgtacataacatgatagtcaat
catccgttagcggcactgcacttggcgccagcattaatgaggttttacacagatgttgag
accactggtagcagtaatgaattctatgataaattcagcattcggtatcacatcagtatt
atttttaagtcattgtggaatattcccttacatcaacaagccattatacaggaaaccatt
tccggcaaagactttgtacgttttgtaaatatgctgatgaacgatacaacattcctattg
gacgaaagtcttgattgtttgaaaagaatacacgaagtccaagaactaattaagaataag
gaaatttgggataaaatgacacaggatgagcaggagggtaaaaggcggcaattgtcgact
gatgaaagacaagtgagatcatatttgacgctagctggtgaaacgttagacatgtttcat
tatttgacacagaaaatcacagaacctttcctaagacctgagcttgctgtacgtttggct
gccatgttgaactttaatctacagcagctgtgtggtccaaaatgtaacgatttacgagta
gaaaacaaagaaaaatatggatttgaaccaaagaaactattggatcaactcacggatatt
tatctacatttttctgattgtccaaagttcgcagaagctgttgctgccgatgaacgttca
tatcgcaaagaagtgtttgatgttgcccttggcgtgatgtccagagctaacatcaagatt
gaatcggatattcagaggttcagggatttggcatctgttgtggataagattgtcatcagt
aatctgaagaaagacattgactttgaagatgcacctgatgaattcaaagatcctttaatg
gacacattaatgacagacccagtactgttacatacatcaggtaatatcatggatcgacca
atcattgagcgacatctattgaattcatcaactgatccgttcaacagacaggctttagac
tcagaagatttacagccaatgccagagttaaaagcaagaattcaacaatggatgaggcaa
acgcaaatgttgaaaaggaagcaagacaaatag
DBGET
integrated database retrieval system
