Saccoglossus kowalevskii (acorn worm): 100370269
Help
Entry
100370269 CDS
T04123
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit 3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100370269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100370269
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100370269
mRNA degradation factors
3'-5' decay
Pan complex
100370269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
Pkinase
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
HIGH_NTase1
Torus
Motif
Other DBs
NCBI-GeneID:
100370269
NCBI-ProteinID:
XP_006820509
LinkDB
All DBs
Position
Un
AA seq
772 aa
AA seq
DB search
MNSNVPGPKKMAICRYWANNRTCFYGDDCQFLHSDRVPNLTTAISPAVKNQMKQGIPDRS
PRSIGNSGRAPDQFFPSPFNNLNLVGESNMPFQPDLQHGSMMAKDQNQYLFPGSSGPDGS
LGDEMAGLSLASMNDKRGPNPGALEFIPGSKNVSGGSSEFLPGVSEFIPRSKLSSNTSTS
SSVFSPMASSHLSTGRGYQESMWSNSMSSGPSPMHSPKLTPTGSPIMMRHRNRSPTPAAL
DLGSPGTPAQPPIGGKQDPMVSNHIQENIGGTTYFYTQEQMQAAQPTGVYPSFHVYPSEP
PSVSYMTPKPNAPSFFLSDELRIDIIHRHLQTMTTVDLAQYPDLPTEVDNYHTLCPLEPI
PTSPLEKSSTFGYVTSCYKAVNSKDGKTYCLRRIHGFRLVNTNCMALVDMWKKIQHSNIV
TLREVFTTKAFGDLSLVFAHDFHAGAETLMSRHFSNPNMMGKDHHVKNKYKQGIKSLRQH
AGLLPESVIWTYVVQLSSALRTIHAAGLACRVMDPTKILLMSKSRLRVNCVGIFDVLTFD
NNQSNPLAMMPHYQQEDLVSLGKVVLALACHSVLGIQRENIQASMELVAVNYSEDLKNLI
LYLLTNQNRLRSVNDIMPMIGARFYTQLDAAQMRSDVIEEDLSKEVQNGRLMRLLAKLNT
ICERPEFSMDPTWSETGDRYLLKLFRDHVFHQVSDTGAPWMDLAHIVYCLNKLDAGAPEK
VCLMSRDEQNVLVVSYSDLKVCFENTFSEILQANQSTPHHPTQPQVQAPPTT
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaatgtccctgggccaaaaaagatggccatttgtcgctactgggcgaataat
cggacatgtttttacggcgacgattgccaatttctgcacagcgatcgggtacccaatttg
actactgccatttctccagctgtgaaaaatcaaatgaaacaaggaattcccgatagatcg
ccgagaagcattggtaattctggacgagctcctgatcagttttttccttctcccttcaac
aatctcaatcttgtgggtgagagcaacatgccttttcagcctgacctacaacatgggagt
atgatggcgaaggatcaaaaccagtacttatttccaggcagctctggtcctgatggttca
ttaggtgatgagatggcagggttatctttagcctccatgaatgataaaagggggcctaac
ccaggagcacttgaattcattcctggtagcaagaatgtgtctggaggaagcagtgagttc
ctaccaggtgttagtgagttcataccacggtccaaattatcatcaaatactagtaccagc
agttctgtcttttcacctatggcatctagtcatcttagcacaggtagggggtatcaagaa
tccatgtggtccaactctatgtcgtctggaccatcgccaatgcattccccaaagctcaca
ccgactggctcacccataatgatgcggcataggaacagatcacctactccagcagccttg
gatctcggctctccaggaacgcctgcacagcccccgattggtggtaagcaagaccccatg
gttagcaatcatattcaagaaaacattggtggaacgacctatttctacactcaagaacaa
atgcaagctgctcaacccactggggtgtacccttcttttcacgtatatccgtcagaacca
ccgtctgttagttacatgacacctaaacccaatgcaccatcattctttctcagtgatgag
ttgagaatagatatcatccatagacatttacaaacaatgactacagtggatttggctcaa
tatccagacttgccaactgaagtagacaactatcatactctatgtccattggaacctatt
cctaccagtccgttagagaagtccagtacgtttggctatgttacatcttgttataaagct
gtgaacagtaaagacggcaagacatattgcctccggagaatacatggttttcgtttagtg
aacaccaattgtatggcattagttgatatgtggaagaagattcaacattccaatatagta
acattgagagaagttttcactaccaaggcctttggagatctgtctctagtgtttgcccat
gacttccatgcaggagctgaaaccttgatgtctagacacttcagtaatcccaacatgatg
ggtaaagatcaccatgtgaaaaacaaatataaacaaggtatcaaaagtcttcgacaacat
gctggcctgttaccggaaagtgtcatctggacatatgtggtgcagttaagttcagcttta
agaacaatccatgcagctggtctagcttgccgtgtcatggacccaactaaaatacttctg
atgagtaaatcacggttgcgagtcaactgtgttggtatttttgatgttttaacatttgat
aacaatcagtccaatccactggctatgatgcctcattatcagcaagaagatctggtatca
ttgggcaaagttgttttagcacttgcatgtcactcagtacttgggatacagagagaaaat
atccaggcttcaatggagttagtagctgtcaactactcagaagatttgaaaaatctgata
ttgtatttgttaacaaaccaaaaccgattacggagtgtcaacgacattatgccaatgatt
ggtgctcgtttttatactcagctggatgctgctcagatgagaagtgacgtaatagaggaa
gacttgtctaaagaagttcaaaacggccgtctaatgaggctgctggccaagctcaacaca
atatgtgaaagaccagagttttcaatggatcccacatggtcagaaactggtgatcgttac
ttattgaagttattccgtgaccatgtattccatcaagtatcagatacaggtgcaccatgg
atggatttagctcacattgtctactgccttaacaagcttgatgccggtgcaccagagaaa
gtgtgcttgatgtcacgggatgagcagaatgttctagtggtgtcttacagcgatctaaaa
gtctgttttgaaaacacattttctgaaatcttacaagccaaccagagtacaccgcaccac
ccaacgcaaccgcaagtacaagcgccgccaaccacgtaa
DBGET
integrated database retrieval system
