KEGG   Saccoglossus kowalevskii (acorn worm): 100370292
Entry
100370292         CDS       T04123                                 
Symbol
WDR48
Name
(RefSeq) WD repeat domain 48
  KO
K15361  WD repeat-containing protein 48
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100370292 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sko03400]
    100370292 (WDR48)
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     100370292 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_SPT8 WD_LRWD1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_DCAF4 RAWUL Tfb2_C
Other DBs
NCBI-GeneID: 100370292
NCBI-ProteinID: XP_002730546
LinkDB
Position
Un
AA seq 673 aa
MAVHHRQPSVARKKVQVSFVIRDEIERCHRSGINGLQYDPITQRLYTAGRDSIIRIWNPN
IIKDPYVQSMEHHTDWVNDVIVCCGGRTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVK
ALAYAKDREHVASAGLDKQIFLWDVNTLTALTASNNTVTTSSLSGQKDSIYSLAMNSVGN
VIVSGSTEKILRVWDPRTCAKLMKLKGHTDNVKALLLNREGTQCLSGSSDGTIRLWSIGQ
QRCMSTYRIHDEGVWALQANDTFTTFWSGGRDRKIFQTDMRIADSSVLVCEESAPILRMC
LCDDPLSLWVATTKSNINKWYLKNRSSRSSGDYDNNRTEPMNTQPDLTIKGGASIVQYHV
LNDKRHILTKDTDDVVALWDVLKACRIKELGKVDLELEIKNRFKRVYVPNWFSVDLKIGM
LCIHLEESDCFAAWVSAKDVGLEPNDGADAKVNFGGLLLQALLEHWPRTHAMTHLDDITN
HVNSDAMSPNDINVNLEPRNGNGYFTVPIHTPVIFSEVGGRTLFRLLCRDAGGETEEMLL
NETVPLWVVDITVDRNTPKFNKISFYLQPHSSSGIKSLKKDRLSASDMLQVRKVLEHVYE
KVMGADNVSQTTASSTERGEPEKDEDTASMAEDKVELLCQDQVLDPNMDLRTVKHFIWKS
GGDLSLHYKQKPT
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggcggttcatcaccgacagccgagcgtcgctcggaagaaagttcaggtgtcctttgta
atccgagatgaaatagaaagatgtcataggtcaggaatcaatggtcttcaatatgatcca
atcacacaacgattatacacggcaggaagagattctattatcaggatatggaatcctaat
attattaaggatccatatgtgcaatccatggaacaccatacagactgggtgaatgatgtc
atcgtatgctgtgggggtcgaacattaatttcagcatcttcagacacaacagtaaaagta
tggaatgcacacaaaggattctgcatgtcaacgctacgaacacacaaggattatgtgaaa
gcattggcatatgcaaaggaccgcgagcatgtggcatcagcggggttagataaacagata
tttctatgggatgtgaatacattgactgcccttacagcatctaataatacagttacaact
tcatcacttagtggacaaaaagatagtatatacagtctagcaatgaattcagtcggtaat
gttattgtgtcgggttctacagaaaagatacttcgtgtgtgggatccacgtacttgtgca
aaattaatgaaactaaaaggccatactgataatgttaaagctttattattgaatagagaa
ggtacacaatgtctatctggtagttcagatggaacaattcgattatggtcaataggtcag
cagcgatgtatgtcaacgtatcgtatccatgacgaaggtgtatgggctctacaagctaac
gacacatttacaacattctggtcaggtggtcgtgaccgaaaaatttttcagacagatatg
agaatagccgatagcagtgttttagtatgcgaggagagtgcgccaattttacgcatgtgt
ttatgtgatgaccctttatcactgtgggtcgctacaactaaatcgaatattaataaatgg
tatttaaaaaatagaagttcaaggtcttcaggagattatgataataacagaactgaacct
atgaacacacaaccagatcttacaataaaaggaggggccagtattgtacagtaccatgtt
ttaaatgataaaagacatatattaactaaagatactgatgatgttgttgcattatgggat
gtattgaaggcttgcagaattaaagaattaggcaaagtagatctagaactagaaattaaa
aatagattcaagagagtatatgttccaaattggttcagtgttgacctcaaaatagggatg
ctatgtattcatctggaagaaagtgactgttttgctgcatgggtctctgctaaagatgta
ggacttgaaccaaatgatggtgctgatgcaaaagttaattttggtggtctgttacttcaa
gcactgttagagcattggccaagaacacatgcaatgacacatcttgatgacatcactaat
catgtgaatagtgatgcaatgagcccaaatgacatcaacgttaacctagaacccaggaat
ggaaacggttacttcacagttccaatccatacgcctgtgatcttctccgaagtgggtgga
aggacgttattcaggttattgtgtcgggatgctggcggtgaaacagaagaaatgttatta
aatgagacggtccctctgtgggttgtagatatcactgtagatagaaatacaccgaagttc
aataaaatttcattttacttacaaccacattcctcatctggaattaagtcactgaaaaag
gacaggctctctgctagtgatatgttacaagtcagaaaagtcctggaacatgtctatgaa
aaagtaatgggtgccgataatgtttcccagacaacagcatcatccacagaacgaggagaa
ccagaaaaagatgaagatacagcatcaatggcagaagataaagtggagctgttatgtcag
gatcaggtattagacccaaacatggatttgagaacagtcaaacactttatctggaagagt
ggtggtgatctatcattgcattacaagcagaaaccaacataa

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