Saccoglossus kowalevskii (acorn worm): 100370404
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Entry
100370404 CDS
T04123
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100370404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sko03032
]
100370404
03029 Mitochondrial biogenesis [BR:
sko03029
]
100370404
Enzymes [BR:
sko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100370404
DNA replication proteins [BR:
sko03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
100370404
Mitochondrial biogenesis [BR:
sko03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
100370404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
100370404
NCBI-ProteinID:
XP_006815395
LinkDB
All DBs
Position
Un
AA seq
1312 aa
AA seq
DB search
MATRKILQCVPSIFHQNNVTFLPSVSNGLHVHRFSAATSKAIDQEKTEEESTRYNPIHIQ
MLSKSLHQQIFREKFGEVSNTESQEKKINKSIKHLKRHGLWGKQSTLLPEVDFQLPELYG
DNIEDHFRVLAQQQSNTYLMLAESLAEAKLPTMPTEWIKEYGWTKYESNGSTMSVAYPED
RALVFDVEVCMTEGKLPTMAVAVSQNAWYSWCSEQITEDRFSWAQKIGLKDLIPLDQQQS
DGEWLPGVVIGHNVSFDRALVKEQYLMKGPKTRYLDTMSFHMAISGLTSFQRILWNYHKK
NKNVGNQDVKEHLKKSQQRLQGPLVHDWVEVSSPNNLGDVYSLYCDGLALDKTERKVFVT
GSIQDIRHQFQELMSYCARDVKATHEVFSKILPMYFERFPNPVTFAAMLEMSQVYLPVNN
NWQRYLNETQGTYEDLQKEMKLSLMHLANDSCELLHNDRYKKDPWLWELDWSSTELKMKK
IKGKSKNGNNTQTDVGEVTNDGLSQKSQSMVSAVDMKDNEDDCNHALNFKEAPYGQSAES
VRSSDEFEFDENSAYEEYAENSFLSTGNECDQTIESLPFNTQKRSYSQDASVSKPTFKTS
ELVAIARKRKREDEKRLEAENRINDILASKNLLYKRKQHMVGYPNWYRDLCPRFKVDSDW
KPGPSLITSQVQVTPKLLRLTWDGFPLYRDDKHGWGYLVPGRQHNMSRDKQDATSQGDAE
SVDKKMVEFPIRSLRKLMKDIPKFSDSEKEDDLMTEDEILSKIEELGNGNGSNWDKAEIS
QKRLCRDSPSWHVGNGPHNDVDIPGCWFFKMPHKDGSHKKVGNPLAKDFLSKMEDGTLSS
FGGVQANRILEISKMISFWRNAQDRISSQMVISLERSELPKTVTRHVEYDEDNNYGAILP
KVVTAGTVTRRMVEPTWLTASNARPDRVGSELKAMVQAPPGYHFVGADVDSQELWIASLL
GDARFAGFHGCTAFGWMNLQGNKLERTDLHSKTADTIDISRDQAKVFNYGRIYGAGQPFA
VRLLMQFNHRMSVDEARRKASTMYSATKGIKKYKLKEDVREIVRKLLSKKKQSRWITNEE
LRTLRRRLKYTLEYQYVEDIESNIPLTDLLDYSFDLTEKREWKVGSESEMFNQLESIAMS
DEPRTPVLGCRISRALEPMSVNNEFLTSRINWVVQSSAVDYLHLMLVCMRWLLDKYDIDG
RFSISIHDEVRYLVNSNDKYRAAMALQISNLLTRCMFAYKLGMLDLPQSVAFFSAVDIDT
VLRKEVSMDCKTPSNPHGLEKGYGIPEGEALDIYDVLKLTNNGSLEKPKIRK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggctacaagaaagattctgcaatgtgtgccttccatcttccaccaaaataatgttaca
ttccttccatctgtctccaatggattacatgtgcatagattcagtgctgcaacatccaaa
gccattgaccaagaaaagacagaagaagaaagcaccagatacaaccccatccatatccag
atgttatcgaaatcattgcatcaacaaatattccgagaaaagtttggagaagtttcaaac
acagaatcacaagaaaaaaaaataaacaagagtataaaacatctaaaacgacatggatta
tggggaaagcaaagtactctcttaccagaggttgattttcaacttccagagctttatgga
gataatatagaggatcactttagagttttggctcagcaacagagtaatacctaccttatg
ttagcagaaagtttagctgaggcaaagcttccaacaatgccaactgaatggatcaaagaa
tatggatggactaagtatgaatctaatggtagtacaatgtcagttgcatatcctgaagat
agagcccttgtttttgatgttgaagtttgcatgacagagggaaaacttccaaccatggca
gttgctgtttcacagaatgcatggtattcttggtgcagtgagcaaatcacagaagataga
ttttcatgggctcagaagataggcttaaaagatttgattcctctagatcaacaacaatct
gatggagaatggttgccaggagttgttattggtcacaatgttagttttgatcgtgcactt
gtaaaagaacagtatttaatgaagggtccaaaaactagataccttgatacgatgagtttt
cacatggcaatatcaggcttaacaagttttcagagaatactatggaattatcataaaaag
aataaaaatgttggaaatcaagacgtaaaagaacacctaaaaaaaagtcaacagcgactg
caaggtccattggtacatgactgggttgaagtgagtagtcccaataaccttggtgacgta
tatagtttatactgcgatggtctggctttggataagactgaaaggaaagtgtttgttact
ggttccattcaagatattcgacaccaattccaggaattaatgagttactgtgccagagat
gtgaaagctacacatgaagtattttcaaaaatactacctatgtattttgaaaggtttcct
aatcctgtgacatttgcagccatgttagaaatgagtcaagtatatctaccagtcaataat
aactggcaacgctatctcaatgaaactcagggtacttacgaagatctgcagaaagagatg
aagttatcattgatgcaccttgctaatgactcgtgtgaattattgcacaatgatcggtat
aagaaagacccatggttatgggaactggattggtcaagtacggaactgaaaatgaaaaaa
attaaagggaaaagtaaaaatggcaataatacacagactgatgttggagaagttacaaat
gatggtttgtctcagaaaagtcaaagcatggtgagcgctgttgatatgaaagacaatgaa
gatgattgcaaccatgctttgaatttcaaggaggctccctatggccagtcagctgaaagt
gtcaggagttctgatgagtttgaatttgatgaaaatagtgcttatgaggaatatgctgaa
aattcttttcttagtacaggaaatgaatgtgatcaaacgattgaaagtttgccattcaat
acacagaaacgatcttattcccaagatgcatcagtttctaagccaacttttaaaacttct
gaactggttgctatagctagaaagaggaagcgagaagatgaaaaaagacttgaagctgaa
aaccgcatcaatgatattttagcatccaagaacttattatataaacgtaaacaacatatg
gttggttatccaaactggtacagagatttatgtccaagattcaaagtagattcagattgg
aagcctggtcctagtttgataacatcacaagtgcaggtcaccccaaagctattgagatta
acatgggatggttttccactttatcgtgatgacaagcatggatggggatatctggttcca
ggcagacaacataatatgagcagagacaaacaagatgccacttcacaaggagatgcagaa
agtgttgacaaaaaaatggttgaatttccaattcggtctctcagaaaattgatgaaagat
attcctaaattctctgatagtgaaaaagaagatgatcttatgacagaagatgaaatactt
tcaaaaattgaagaacttggaaatggaaatggtagtaattgggacaaagctgaaatttct
cagaaacgattatgccgtgattctccatcatggcatgttggtaatggaccacataatgat
gttgatatacctggttgctggttctttaagatgccacataaggatggatctcacaagaaa
gttggaaacccgctagccaaagactttctatctaagatggaggatggtacattgagctca
tttggtggtgttcaagccaatagaatactagaaattagcaaaatgatatcattttggaga
aatgcacaagatcgaataagttcacagatggtaatctcacttgagagaagtgaacttcca
aagacagtgaccagacatgtagaatatgatgaagataacaactatggtgccattctacca
aaagtagttactgctggtacagtaactagaagaatggtagaaccaacatggctaacagca
agtaatgcgaggcctgacagagtaggtagtgagttgaaagctatggtacaagcaccaccc
gggtatcactttgttggtgctgatgtcgactcacaggaactatggatagcatctttgctt
ggtgatgccagatttgctggatttcatggttgtacagcatttggttggatgaatctgcag
ggtaataaacttgaaagaactgatttacacagtaaaacagcagataccattgacatcagt
agggatcaagctaaggtgttcaactatgggagaatctatggtgctggtcaaccatttgca
gtcagactattaatgcagtttaaccatcggatgtcagttgatgaagctagaagaaaagca
tccacaatgtacagtgctacaaaaggcattaaaaaatacaaactaaaagaagatgtcaga
gagattgtgagaaagctgctgtcaaaaaagaagcagtcaagatggataacaaatgaggag
ttgaggacgttaagaagaagactgaaatacacccttgaataccaatatgtggaggatata
gagagtaatataccactgacggatctactagactacagttttgacctaacagaaaagaga
gaatggaaagttggaagtgaatcagagatgttcaaccaacttgaaagcattgccatgagt
gatgagccaagaacacctgtactgggttgtagaataagcagagccctggaaccaatgtca
gtcaataatgagtttcttactagtcgcattaactgggtggttcaaagctctgctgtggat
tatcttcacttgatgttagtctgtatgaggtggttgttggacaaatatgatatcgatgga
agattttctatcagtatacatgatgaagtacgatatcttgttaatagtaatgataaatac
cgagcggccatggcattacaaatcagcaatctccttactaggtgtatgtttgcatataaa
ttgggtatgttggatctacctcagtcagtggcatttttcagtgcagttgatatcgataca
gtattaagaaaagaggtcagcatggattgcaaaactccatcaaatccacatggcttagaa
aaaggttatggtatacctgaaggtgaagcccttgatatttatgatgtcttaaagttgacc
aataatggatcactggaaaaaccaaaaatcagaaaataa
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