Saccoglossus kowalevskii (acorn worm): 100370494
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Entry
100370494 CDS
T04123
Name
(RefSeq) transcription factor Sox-6-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sko03000
]
100370494
Transcription factors [BR:
sko03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100370494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100370494
NCBI-ProteinID:
XP_006812626
UniProt:
A0ABM0LXY5
LinkDB
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Position
Un
AA seq
659 aa
AA seq
DB search
MATKHGIANDTELPVKREKLDSNEEGVTRIGIDMPDSGNIHRIMNNREKHDDVDGNTAEN
GFRNKEQQVVNDSIRQRERQLEGMIHQLQGLREQLLAQQQENNELQKDQLQKQQQQIEIQ
RQQQEMIQMQQQQLLQQQQKIQVLQQQIQESTQNSPSPYVRLIPVYPSDIGHAASLGVLP
DGVHQNMLVRPQPSPKMDQRPSGVIIDKSKNAISCASLTRFSEHAPVTTTPMGFRSHPQG
LLTIPSVTPTPQAIPSTLGGAKSALQSLLTNPQPLNLSKPSKVNDSDNITTTTASVTSPK
LASTTADLSKVPQVTSPKRYIVHEPDMVSEAIRQARQLKQKTELERMLGPKLEVGTGHNF
LGNYPHSFLPGQHKEQAMSPGSCSQSSISSGSSIDSKVIDNTTDKERIALEALAQRFCTR
TTSSATSYPVSVNVNDDCDKAYPSHVYSTAGHEHRQGMKDGRMVIDLTDEEERNKLEQMS
PNSATIARMYRDGRRYQPNEPHIKRPMNAFMVWAKEERKKILSMHPDMHNSNISKILGAK
WKAMSNADKQPYYEEQARLSKAHLEKYPDYKYKPRPKRTCIVDGKKLRISEYKALMRAKR
QEVRHVLYTSEAQRLAVQHAITSLNDQPGAIMTTANSPLMENPYMRSPEYIEMNRDNKD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaaacacggcattgctaatgacaccgaacttccagtgaaaagagaaaagttg
gattctaacgaggaaggagtaacaagaataggtatcgatatgccagatagcggtaacata
caccgaattatgaataaccgtgagaaacatgacgacgttgatggtaacactgccgagaat
gggtttcgtaataaagagcagcaagtagttaatgattccatacgacaaagggaacggcaa
cttgaggggatgattcaccaactgcaaggtttacgagaacagttgctggcccaacagcag
gagaacaatgagctacagaaagatcagctgcagaaacagcaacagcagattgaaattcaa
cgacaacaacaagaaatgatacagatgcaacaacagcaattactgcagcagcaacagaaa
atacaggttctgcagcaacagatacaagagtccacacagaactctcccagtccatatgtc
cgactgattcctgtgtatccgtctgacataggacatgcggcctccctaggagtactgcca
gacggtgtacaccagaacatgcttgtacgccctcaaccatctcctaagatggatcagcgt
ccatcaggggttatcattgacaaatcaaaaaatgctatatcctgcgcatcgctcactcgg
ttctcagaacatgcacctgtgacaactacgccgatgggatttcgtagtcaccctcagggc
ttgttaacaataccaagcgtcactccgacaccacaagcaatcccctcaactcttggagga
gctaagagcgcactccaaagcctcctcacaaatccacagccactgaatctttcaaaacca
tccaaagttaatgactctgacaatataacaacaaccactgccagtgtgacttctccaaaa
cttgccagtacaaccgcggatttgtcaaaagtgccgcaggttacatcgccaaagcgttat
atagttcatgaaccggacatggtgtctgaagcaatacgccaagctcgccaactgaaacag
aaaactgaattggaacgcatgttaggtcctaaacttgaagtgggtactgggcacaacttt
cttggtaattaccctcacagcttccttccaggacaacacaaggagcaggctatgtctcca
ggtagctgcagtcagagctctatcagtagtggttccagtattgatagcaaggtaattgac
aataccactgacaaggaaaggattgccctcgaagcattagcacaaagattttgtactcgt
accacctcctcagccacatcctatcctgtcagtgtcaatgttaatgatgattgcgacaaa
gcttacccatcgcatgtatactccactgctggacacgaacaccgtcagggaatgaaggat
ggcaggatggtgattgacttgactgacgaagaagaacgaaataaactagagcaaatgtct
cctaactctgctaccatagctcgcatgtaccgtgacggacgtcgttaccaaccaaatgag
cctcacatcaagagaccaatgaatgcattcatggtgtgggccaaggaagaacgcaagaag
attctgtccatgcatcccgatatgcacaattcaaatattagtaaaatacttggtgccaaa
tggaaagcaatgtctaacgctgacaagcagccatactatgaagagcaggcaagactaagc
aaggcacacctagagaagtaccctgattataagtacaaaccgcgaccaaaacgtacatgt
attgtcgatggcaagaaactgcggatcagtgagtacaaagcactgatgagagcgaaacga
caagaggtacgacatgttctttacaccagtgaagcgcaacgattggctgttcaacatgcc
attacatcattaaatgaccaacctggcgccataatgaccacggccaactctccactgatg
gaaaatccgtatatgcgttcgccggagtacatcgagatgaaccgggataataaagattag
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