Saccoglossus kowalevskii (acorn worm): 100370570
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Entry
100370570 CDS
T04123
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein-like
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sko03016
]
100370570
Enzymes [BR:
sko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
100370570
Transfer RNA biogenesis [BR:
sko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100370570
Prokaryotic type
100370570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
DUF4615
HTH_26
Motif
Other DBs
NCBI-GeneID:
100370570
NCBI-ProteinID:
XP_002738360
LinkDB
All DBs
Position
Un
AA seq
682 aa
AA seq
DB search
MVHFLSNHSGFNGKIKERYKDFRVTELTVEGGAVCLCLNGNVENPVRSHTVHDTCSQSIN
QDRKVFEYWKGKDAATLQATLCEVLKNEEPLLKLNIFSEKINNDANHHGDNQNDEDCISL
GLFNEKEQRAKLHHCVKQLHPHLKTTTSRNQESSYEIFASSDRNYFEFKTLLSADQVNNL
LRFIDDKNASSMLKLQVGKCKERRTRIHRLIAKYYGAMVETKTFVGNFKGVTPHEKSSIV
VRFREKFHQQKGKKRKHAVGENKEDIYTAFVLEKRDLETLDAIQQIADATGCQPSDISYA
GMKDKKAITTQAMVIRGVLPHKLQEINDSLPNIRVGTIKRCCAPLKLGQLGGNHFEILIR
DATSESYRLEDVVSTAMEHIQEHGFVNYYGTQRFGSNDSPVTADRVGLALLKGNMKEAIN
LILMPGDGKDTVNEAKRHWRNTNNAKETLSMMPRYKIRECMLLKALHRHGQDNDGCTKAL
LMIPYYMRVLYVHSYCSLVWNKLASYRIQQYGVDVVVGDLVEVTEGNKTQVKIVEPEDIH
KSRYSISDVVLPLPGNTVTMPTNSVSHMYSQLLSSDELEQHNFRISSLKMNIHGDYRKLI
AWPRNTQYKLLTRKSKVYEESCKETKAVFISQDACSSAQSVNKEVQTSSDDEQSDCNVEV
SFDLLPSSYATVCLREIMKTPK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggtacacttcctatcaaaccatagtggatttaatggcaagattaaagaacggtacaaa
gatttcagagtcacagagttaacagttgaagggggtgctgtctgtctttgtctgaatggg
aatgttgagaatcctgtgagatcacatactgtccatgatacctgttcacaatccattaac
caagacagaaaagtttttgagtattggaaaggaaaagatgctgctacattgcaagctact
ttatgtgaggttttaaaaaatgaagagccacttttaaaactcaacatattttcagagaaa
ataaataatgatgctaatcaccacggtgacaatcaaaatgatgaagattgcatctcactt
gggctatttaacgaaaaggaacaacgagcaaagcttcaccactgtgtgaaacagctccac
ccacatttaaaaacaacaacatctagaaatcaggagagtagctatgaaatttttgcttcc
agtgatagaaattattttgaatttaaaacattgttgtctgctgatcaggtgaataatttg
ttgaggttcattgatgataaaaatgcaagtagcatgttaaagctgcaagttggaaaatgt
aaagagaggaggactagaatccatcgcctgattgccaaatactacggtgctatggtggaa
actaaaacatttgtcggtaatttcaaaggtgtaactcctcatgagaaatcttctattgtg
gtgagatttcgtgaaaagttccatcaacagaaaggaaagaaaagaaaacatgctgtgggt
gaaaataaagaagacatatacacagctttcgtattagaaaaaagagatttagaaacattg
gatgctatccagcagatcgctgatgccactggatgccagccgtctgacattagttatgcc
gggatgaaagataaaaaagcaatcacaacacaagctatggttattagaggggttcttcca
cataaattacaagaaattaatgattctttgccaaatatcagagttggcacgattaaaaga
tgctgtgccccgttgaagcttggtcagcttggtggaaaccactttgagatactgatacga
gatgcaacttctgaatcttatagacttgaagatgttgtttccacagcaatggaacatatt
caggaacatggatttgtgaattactatggaacacaacgatttggttcaaatgacagtcct
gtaactgcggacagagttggactagctctactcaaaggaaatatgaaagaagccattaat
ttgattttaatgccgggagatggaaaagatacagtcaatgaagcaaagaggcattggaga
aatacaaataatgcaaaggagacgctgtctatgatgccgcgatataaaatccgagagtgc
atgctgttgaaggcgttacaccgacatggacaggacaatgatggatgtactaaagcattg
cttatgataccatattacatgagggttttgtatgttcacagttattgtagtcttgtatgg
aacaaattagcatcttatagaattcaacaatacggagttgatgttgttgttggggatctt
gttgaagtgactgagggaaacaagacacaggtgaaaatagtagaaccagaagacatccat
aaaagcagatactctatcagtgatgttgtgctaccattgcctggcaacacagttactatg
ccaaccaactcagtttcccacatgtattcccagctactttcctctgatgaattagaacaa
cataacttcaggatctcttctttgaaaatgaacatccatggagactaccgaaaacttatt
gcatggccaagaaatactcaatacaaacttcttacaagaaagtctaaagtttatgaagag
agttgtaaggaaacaaaagcagtttttatttcccaggatgcatgtagtagtgcacagtca
gtcaacaaggaggtacagacatccagtgacgatgaacagtctgattgcaatgtagaagtt
tcatttgatttactgccatcctcttatgctacagtgtgcttaagagaaattatgaaaact
cctaaatga
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