Saccoglossus kowalevskii (acorn worm): 100370652
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Entry
100370652 CDS
T04123
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100370652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sko03000
]
100370652
03021 Transcription machinery [BR:
sko03021
]
100370652
03036 Chromosome and associated proteins [BR:
sko03036
]
100370652
Transcription factors [BR:
sko03000
]
Eukaryotic type
Helix-turn-helix
ARID
100370652
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100370652
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100370652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100370652
NCBI-ProteinID:
XP_006815115
LinkDB
All DBs
Position
Un
AA seq
2295 aa
AA seq
DB search
MMAAQVAANVNCERDMNTQGQTGTEMDTNSMDFNARPSPGNTDHTPENIVGSITDSSTVG
KRMKIEAPANLEQGEIPHTKANNNNQDGGGHDSVGRNCEQSGFESRMEPYPMSNNPSFEP
NIPNQLMDSNRSMNSMSNPGLHGGFSNSYYSGGGGSSVRNSYNMADQTQHGGPGPTNTPQ
NMGPNPNMGQHSVGMGQYNQYDSAGNLRTGYPPSSKPMSGGLNTRTSSSSNMTPHYNTTQ
QQQQQQRYLSGSGSHSAGQAPTLSQLLQGQKPNQMYPNTYQNPSDYSQGMGKGPEVSNMN
MSGGPVAYGQQWSNTQRTQQHHQNMSPMGPNQGINRSQMGGMMEMQKRQQSGYMMPNTSS
GYQQGQYGGRSYPNSSQQRYPIPGQHRSQHGPQHGPPNIAGQHSQYTQQQMPPNYPQQGQ
QMGYPQQQQHQQQPYVQQQMPPQPPPPPPPPQQQQQWSQQQGQPPVAGQPSSVLSGGLAQ
QSMLPSLPNQQEDSMMPRPPSLPDLAGAIDDLPSGLEINQGSAPASSQPSQPSSQSQSSN
DGFNTPVQSPHVHPSVTALRPSPSPVGSPASHISRSASMSPASVQGNPMTPQPPNQMPPP
SSQSEIVNHPSPMSTQERTMERGLNQQMHGSMQGSGNQMVGSPMSAYGGSQGMSKMSPHA
APTGPAMYPPQQMAPYQQNSGPPTSGYQYNQQGNYPRPPLGGYNNQMNNYGANVTTGNGG
NVHGMPASSYPDTRMRNPSVNSMGNVPSSYGGFSSSSSGHMPPQTPPTAPQSTGIKPGMG
QYGPTQQPRTDTAPNSGQVIGPNRDPATSIKGAQAAAQAAVMAAANTAQNRPVMYQRQPP
PQYQQRTFPPSYQHQQWQQHQEQPQQGYPPNTIPPMTPTSMPNASMQMPSENMDSFGSGP
MPQPATSMPTSPGPGFTSVTQSITSPVSTSTVVNSVMTDPQKTSPAPVKEEPVQNKDDSV
SRPSSPPIGLLGASPLPSPDSNSKASSQECDHQNPSPNSLPRTPQSPSSKPERPVNDQAR
RLYKLCDDPARAPFLDKLVKFLEDRGEPIKKCPMMSNTTLDLYKLYKCVKDKGGAAEVSR
HKQWKDICAVMNIGSSNTAAFTLRKNYNKYLLSYECQFDKGGINPNDVIPQRECGSMKIK
NERPSIESLDSLKDDSSQQSLPNSISGEVKRPPSQISSDRVPTPTGQHHEYPRPSSALSS
SSLVNNMSPMPPSGIMGPMLNNSMVPPRSNSSNSVSVQDPFADDVGNFPPSNAPFPGMPN
SYNDGNNRMNSIDPFVNNSMAPNDPFGAITNQPNSINDPYSANRNVPDSFAGRRPDVYRG
NSMDPFDPRRRSGMGMNQGPGAQYQYGNQFDRDSPSRRQRRAGNVGKIDENKHNMKSERF
DQPSGPGVPEPLHPPPQSQQQQQQQQQQHSGMMQQYPPSSGDQQVYPNRYTAQHHPGHRA
HTPHDGYNQPYPGQPQFTPQGPPQPQQQHPYPQSPFQQKRPAPQGEMYGPPTKRTAVGVR
PPLDEGYPMPPYNQQSPMSQNAYPDRNLQNHMQYSPGYRDRLNQGPMAPQGPGQMQQPSH
EGPIPWNNRSDSQYPYPTRQGHMPGHRENFMPDQMRMRDGPSPSWGTMHQNKPFVDGLSH
HAGSSITMYNPSMPGHMQQRQLQHMNREKGNKMMKSQTHMPASSMMVHAKKEICFPPDSI
ECTHPVLKNRKKLTSRDVGPVEAWRVMMCLKSGLLAESTWAIDVLSILLFDDNTVTYFQL
QHLPGLLEILLEHYRRCLIEIFGILDDVEVRENHKSADTKKGCELNKCNGDITSCKNKNT
AVKLEDNVVSSRVVKMENGCDKDAVEKSVDRNTETVCDNMESEEELLNEAINNIDIEKLK
GIDKSKSVKVEKCSKGFYSDEKLWDIFEGFEAGSAHWQMGGGDTTNHIILNFEKADCLVE
NTKKCNEKYKGTERKRVDSREEIEKKIEEQMAFFRSPKIHEDEAYDRDEPPFNVLNDCQD
DLTRRCVGLSNIIRSLSFIPGNDTEMSKHPGFLYVVGTLLLLQHRHPIRNRDIKPFEKDD
MKEEIDDEQPLVKKDEWWWDCLNAVRENTMVTLANIAGQLDLSLYPEGISFGILDGLLHW
AVCPSAYAMDPLPMLSANSPLSPMRLSLETLCKLCILDNNVDMVLATPPFSRLERLYRNL
VQCMGDRREPVIREFAVVLLSSLSQGDSAACRAIACQNSSISMLLSFLEDSELATNAMSN
PGIIAMSGIREELPQPSGDMMRRAATTLACLAKVKENQPLFLQHQSRLLSLVMSPAIDPK
LHSLIAEVLFFSQQS
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagctcaagtggctgcaaatgtcaattgtgaacgcgatatgaacacacaagga
cagacaggaactgagatggacactaactcgatggatttcaatgctagaccaagtcctgga
aacaccgatcatacaccggagaatatcgtcggcagtataacggacagttctacggtgggt
aaacgaatgaaaattgaagcgcctgccaatctcgaacagggcgaaattccccacacaaag
gctaataacaacaatcaagatggtggtggtcatgatagtgttggcagaaattgtgaacaa
agtgggttcgagtcgagaatggagccgtacccaatgtcaaataatcccagttttgaacca
aatattcctaaccaactcatggattctaaccgtagcatgaattctatgtcgaatcccggc
ctacatggcgggttttcgaacagttattatagtggtggtggaggttctagtgttagaaac
agctataacatggcggatcagacacaacatggcggtccagggccaacaaatacgcctcaa
aacatgggtccaaatccgaatatgggacaacactcagtaggtatggggcagtataatcaa
tacgacagcgcagggaatttaagaacgggttaccccccttcttccaaacccatgagtggc
gggcttaatacacggactagttcctcttctaacatgactcctcattataatacgacacag
cagcagcaacaacaacaacggtacctaagtggtagtggtagtcattccgctggacaggcg
cccacactctcacagcttttacaaggccagaaaccaaaccagatgtacccgaacacgtac
caaaatcccagcgattatagccagggaatgggtaaaggaccggaagttagtaatatgaac
atgagtggaggaccggtcgcttacggacaacagtggagcaacacacaaagaacgcagcaa
catcatcaaaatatgagtccgatgggccctaatcaaggcatcaatcgttcacagatgggt
gggatgatggaaatgcagaaaagacaacaaagtggctacatgatgcccaacacatccagt
ggttaccaacaaggacagtatggtggtaggtcttacccgaacagttcacaacagagatat
ccaataccaggacaacatagatcacaacatggaccacaacatggacctcctaacatcgcc
ggacaacatagtcagtacacgcaacaacagatgcctccaaattatccacaacaaggtcaa
caaatgggttacccacaacagcagcaacatcagcagcagccatatgtgcaacaacagatg
ccgccgcagcccccaccgccgccgccgccaccacaacagcagcagcagtggagccagcag
caaggccagccgcctgtagctggacagccttcctctgttttatctggagggctggcacag
cagagtatgctaccttccttgcccaaccagcaagaagactctatgatgccaaggccgcca
agtttaccagatcttgcaggtgctattgacgatttaccgtctggcttagaaattaatcaa
ggtagtgcgccagcaagcagtcagccaagtcagccgtcatcacaatcacagtcctctaat
gatggtttcaatactccagtacagtcaccacatgtccacccttcagtcacagcattaaga
ccatcgccatcacctgtaggatctccggcgagtcacatatcaaggtcggcgtctatgtca
ccagccagtgtacaaggcaacccaatgaccccgcaaccacccaatcaaatgccaccacct
tcgagccaatcagaaatagtgaatcatccatcaccgatgtctacacaggaaaggacgatg
gaacgaggcttaaatcaacaaatgcatggatctatgcaagggtctgggaatcagatggtg
ggatccccaatgtctgcctatggtggaagccaaggtatgtctaaaatgtctccgcatgca
gctcctacaggcccggcaatgtatccgccacaacaaatggcaccctatcaacagaatagt
ggaccgcctacgagtggataccagtacaatcagcaaggtaattatcctcggccaccacta
ggaggttacaataaccaaatgaacaattacggagcaaatgttactactggaaacggtggg
aatgtgcatggcatgcctgcttcctcgtatccagatacacgcatgcgtaatccatctgtg
aacagtatggggaatgtgcccagctcttatggaggttttagttccagcagcagtggtcac
atgccaccacaaactccaccgacagcgcctcaaagtacgggtataaaaccaggaatggga
cagtatggacccacacagcagccgaggactgacactgcacccaattcaggtcaagttata
gggcccaatagggacccagcaacaagtatcaaaggtgcccaagctgctgcacaagcagct
gtaatggctgcagcaaatacagctcaaaataggccggttatgtatcaacggcagccaccg
ccgcaataccaacaacggacatttccaccatcctatcaacaccagcagtggcagcaacac
caagagcagcctcaacaaggctacccacccaacacaatacctccaatgactccgacctca
atgccaaatgcatccatgcaaatgcctagcgagaacatggatagtttcggatcgggtcct
atgcctcaacctgccacgtctatgccaacttcaccaggccccggttttacatcggtaacg
caaagcattacatcacccgtcagtacatcaacagttgtgaatagcgttatgactgatcca
cagaaaacaagtcctgccccagtgaaggaagaacctgtgcaaaataaggatgacagcgtg
tcaaggccatcatcaccacctattgggttacttggagcctctccactgccatcacctgac
tcaaatagtaaagcgtcgtcacaagagtgtgaccatcaaaaccccagtcccaacagttta
ccaagaacccctcaaagtccgtcttccaaaccagaaagacctgtgaatgatcaggccagg
agactttataaactttgtgatgacccagcgagggcaccattcctagataaacttgtaaaa
tttttggaagacaggggagagcctataaagaaatgccccatgatgagcaatactacgtta
gatttatataaattgtataaatgtgtgaaagataaaggtggagcagctgaggtatcccga
cacaagcaatggaaagatatatgtgcggtaatgaacataggaagcagcaacacggcggca
tttaccttacggaagaattacaacaaatatttactaagttacgaatgtcaatttgataag
ggcggaataaatcctaatgatgttataccacagagagaatgtggtagcatgaaaattaag
aatgaacgacccagtattgaatcactcgattccttgaaagatgactcgtctcagcagtca
ttaccaaattctatctcaggtgaagttaaaagacctccatcacaaatcagctcagatcgc
gtacctactccgacaggccaacaccatgaatacccaagaccatcctcagctctgagctca
tcgtcgcttgtcaacaacatgtcaccaatgcccccgtctggtataatgggacccatgtta
aacaatagcatggtcccgcctcgaagtaatagcagcaatagcgttagtgtgcaggatccg
ttcgctgatgacgttggaaactttcccccatcaaatgctccatttcctggaatgcccaac
tcttataacgatggaaataacagaatgaactcaattgatccatttgttaataactctatg
gctcccaatgatccattcggtgcaattactaaccaaccaaactctatcaacgatccatat
tctgccaatcggaacgttccggattcttttgctgggcggcgacctgatgtgtatcgtggc
aattccatggatccgttcgatcccaggaggagaagtggtatgggaatgaatcaaggtccg
ggagcacaataccaatatggcaaccagtttgacagagacagtccatccagaagacagaga
agggccggcaatgttgggaaaattgatgaaaataaacacaacatgaaaagtgaaaggttt
gaccaacccagtggtccaggagtgcctgaacccttgcatccaccaccccagtcgcagcag
cagcagcaacagcaacaacaacaacacagcggcatgatgcagcagtatccaccaagtagc
ggggaccagcaagtgtatcctaatagatatactgcacagcaccatcctgggcatagagcg
catactccacatgatgggtacaatcagccttaccctggtcagccacagttcacaccgcaa
ggtcctccacaacctcagcagcagcatccataccctcagtccccattccaacagaagagg
cctgcaccacagggagagatgtatggtccacccacaaagcgtacagctgtcggagtcaga
ccaccactcgatgaaggttatcctatgccaccatacaatcagcaaagtccaatgtcacag
aatgcatatccagatcgaaatctacaaaaccatatgcagtattctcccggttaccgagat
cgacttaaccaagggcctatggcacctcagggacctggacagatgcaacagccatcacac
gaaggccccatcccgtggaataatcggagcgattcccaatatccatacccaaccagacag
ggccacatgccaggacatcgggaaaactttatgccggatcaaatgcggatgagggatgga
ccatcaccgtcgtggggtaccatgcatcaaaacaaaccttttgttgacggactttctcac
catgccggatcctcgataactatgtataacccatcaatgccaggccacatgcaacagaga
cagttacagcatatgaaccgtgagaaaggcaacaagatgatgaaatcacaaacacatatg
cctgcatccagcatgatggtacatgctaaaaaggagatctgttttcctcctgatagcatt
gaatgtactcatcctgtgctcaaaaataggaagaaattaacatcacgtgatgttggtccg
gttgaagcttggcgtgtaatgatgtgtctgaagtctggattattggcagaaagcacatgg
gcaatagatgttttaagtattttactttttgatgacaatacagtcacatacttccagtta
caacatcttcctgggcttttggaaattctgctggagcattatcgtcgatgtctaattgaa
atcttcggtatcctagatgacgttgaagtcagggaaaaccacaaatctgccgatacaaag
aaaggttgtgaactaaacaagtgcaatggggatattacaagttgtaagaataaaaataca
gcagtgaagttagaggataatgttgtgtcgtcgcgagttgtcaagatggagaatggctgt
gataaggatgcggttgaaaaaagcgtagatcggaatacggaaactgtgtgtgacaacatg
gaatctgaggaggagctcttgaatgaagcaatcaacaatatagatattgaaaaattaaaa
ggaattgataagagtaaatctgtgaaagtggagaaatgttctaagggattttattctgat
gagaaattatgggacatctttgagggattcgaagcagggagtgctcactggcaaatgggc
gggggtgatacgactaatcatataattctgaactttgaaaaggctgactgtttggttgag
aatacaaagaagtgcaatgagaaatacaaaggaacggagaggaagcgggtggatagtagg
gaggaaatcgagaagaaaattgaggagcagatggcattttttcgtagtccaaagattcat
gaagacgaggcgtatgacagagacgaaccgccgttcaatgtactgaatgattgccaggat
gatctaaccaggaggtgtgtgggtctgtccaatataatccgcagcttgtcgttcatccca
gggaatgatactgaaatgtcgaaacatcccggattcctgtatgtggtgggcacactactg
ctgctgcaacacagacaccctattcgtaatcgggatatcaagccattcgaaaaggatgat
atgaaggaagaaattgatgatgagcaaccattggttaagaaggatgaatggtggtgggat
tgtctgaatgctgtcagggagaatacaatggtgacgcttgcaaacattgccggccagttg
gatctgtctctgtatccagaggggatcagctttggtattttagatgggctacttcactgg
gcggtttgtccgtctgcttacgccatggatccattaccgatgttatcggctaattcccca
ctttcacctatgcgtctgagtctggaaactctgtgtaaattatgtatacttgacaataac
gtagacatggtactggctaccccacccttttcacgattagaaagactctatagaaacctt
gtgcagtgcatgggtgaccgaagggagccagtaatccgtgagtttgccgtggtgctatta
tcaagtctgtcgcagggagacagtgctgcttgccgtgctattgcatgccagaactcgagc
atatctatgttgctttcattcctagaggatagtgaactcgccacaaatgccatgtctaat
ccaggtataattgcaatgagtggaatacgcgaagagcttccccagcctagcggggatatg
atgagacgggcggctacaacgcttgcttgtcttgcaaaggttaaggaaaaccagccattg
tttctacagcaccaaagtcgtcttcttagtcttgttatgtcaccagcaatagatccaaaa
ttgcactcgcttatcgctgaagtactattcttttcccagcagtcgtga
DBGET
integrated database retrieval system
