Saccoglossus kowalevskii (acorn worm): 100370879
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Entry
100370879 CDS
T04123
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04140
Autophagy - animal
sko04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100370879
04148 Efferocytosis
100370879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sko04131
]
100370879
Membrane trafficking [BR:
sko04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
100370879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf-RING_Vps41
WD40_WDHD1_1st
Vps39_1
zf_RING_Vps8_fungal
WD40
TPR_GEMI5
zf_RING_Vps8
TPR_HPS5_insect
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
100370879
NCBI-ProteinID:
XP_006824071
LinkDB
All DBs
Position
Un
AA seq
850 aa
AA seq
DB search
MADQEIPEEKKNSEETEEEISGSSEADDDEDDDDDDTSIEDEPKLKYERIGNELQTILSK
NTDAISCLAVHSKFLALHTIIVNQISLDDNGDYIASCSDDGRVAINGLYETEDNQLQALD
YPVKSIALDPKFSRPSSGKQFVTGGNKLVLNERGWLNRLKTTVLHQGEGPIRTIQWRSHF
IAWANDLGVKIYDVSSKRRITYIAKDHDPSLRPEIYRCNLCWKDDITLLIGWADKVKICK
VKERARHDVRDLPSRYVEIVSMFKTDFYISGIAPLGDNLVLLSYVTEGPKQEDEADGSRR
PQLRILEPKMDDYEELSCDALSIRGFQECRPNDYHLEHVESENLFYIVSPKDIVVAKPRD
LDDHVAWMMDHDKFEEALAIAEANSRSLKKHDILEIGKTYLNHLLDEEEYDQAARMCVKI
LGKNKDLWESEVYKFAKIQQLKSIAPYVPRGDMRLSKAIYEMILNEYLQTDYEGFHQLIK
EWSPTLYDLMTIVNAVQERLDRDYEHPVLLKTLGELYTYDKRFDKALAIYLKLGHKDVFT
LIHKHNLFDSIQDKIVILMEFDTEQATRMLIDNVDRVPIETVVTQLEKKPNDKLLYMYLD
ALFQKDPHIGQDHHALQVKLYAEFNRPKLKPFLRNSNYYPLQKALEICEQRQYIPEMVFL
LGRMGNTKQALQLITEELDDVDQAIDFAKEHDDEELWEDLITYSMDKPQFITGLLRNIGT
HVDPIILIRRIREGMEIPGLRDSLVKILQDYNLQISLREGCKKILVSDCFSLMEKLNKIQ
KKGIRVDDEQTCSACHGTLAVDDPRTACNIVVFFCRHAFHEDCLPAHNMETCNICHAQRR
TPGTSSMFRS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaagagatcccggaagagaaaaagaattctgaggagacagaggaagaaata
tctggatcatcagaagcagatgatgatgaggatgatgatgatgatgatacatctatagag
gatgaaccaaaactgaaatatgaaagaattggaaatgaattacaaaccatactcagtaaa
aatacggatgctatcagctgtcttgctgtacatagtaagtttttggctttgcacaccata
atagtgaaccaaatcagcctagatgacaatggtgattacatagcgagttgttctgatgat
ggcagggttgctataaatggattatatgaaacagaagataatcaactacaggctttagat
taccctgtcaagtccattgcattagatccaaagttttcccgacccagtagtgggaaacag
tttgtaactggtggtaataagttagtacttaatgaaagagggtggctgaatcgattgaag
acaactgttctccaccagggagaaggacctattcgaaccatccaatggagatcccacttt
atcgcctgggctaatgacctgggtgtgaaaatttacgatgtgagttccaaacgaagaatt
acatacatagctaaagatcatgacccaagccttcgtcctgagatatatagatgtaacttg
tgttggaaagatgacattacattgctaataggatgggcagataaggtcaagatttgtaag
gtgaaagaaagagcacgccatgatgtcagagatctgcctagtcgttatgtcgaaatagta
tctatgttcaagactgatttctacatttctgggatagctccacttggtgataatctcgta
cttttgtcgtacgtaactgagggacctaaacaagaggatgaagccgatggctcaagacga
ccacaactgcgtatattagaacctaaaatggatgattatgaggaattgtcatgtgatgct
ttatcaatacgtggttttcaagaatgccgaccgaatgactatcatctggaacatgttgag
agtgagaatctcttctacatcgttagtcctaaggacattgttgttgccaaaccaagagat
ctggacgaccatgtggcttggatgatggaccatgacaagtttgaggaagctcttgctata
gcagaagctaacagtagatcactaaaaaaacatgacatactggagattgggaaaacatat
ttgaatcacttacttgatgaagaagagtatgatcaagctgcaaggatgtgtgtaaagatt
cttgggaagaacaaggacttatgggaaagtgaagtatacaagtttgccaagatacagcag
ttgaaatcaatagcaccctatgtaccacgtggtgatatgagactcagtaaagctatatat
gaaatgatattaaatgaatatctacaaacagattatgagggatttcatcagttaatcaag
gaatggtcaccgacattgtatgatttgatgactatagtaaatgctgtacaggaacgactt
gacagagactatgaacatcctgtgttgttaaaaacattgggagaactgtacacgtatgat
aagagatttgataaagcattggccatctatctcaagcttggacataaagatgtatttact
ttgattcataaacataacttatttgattcaatacaagataaaattgtcatcttaatggaa
tttgatacagagcaagcgactaggatgttaattgacaatgttgacagggttcctattgaa
actgttgttactcaacttgagaagaaacctaatgataagctgctgtacatgtatttagat
gcattatttcaaaaggatccccacataggacaggaccaccatgctttacaagtaaagttg
tatgcagaattcaatagaccaaaacttaaaccatttctacgcaacagtaattattatccg
ctacagaaagctttggagatatgtgaacagcgacaatacatacctgagatggttttcttg
ttaggtcgaatgggaaatacaaagcaagctttacagttaataacagaggaacttgatgat
gttgaccaagccattgatttcgccaaagagcatgacgatgaagaattgtgggaagacttg
ataacgtattccatggacaaaccacagtttattactggtttactacgaaatattggaact
cacgtcgatccgattattctgattagaagaatacgtgaaggtatggaaataccaggactg
agagattcacttgtgaaaatactacaagattacaatttacagatttcattgagagaaggc
tgcaagaaaattttggtatctgactgtttttcattgatggaaaaattgaacaaaatacag
aagaaaggcatcagagtagacgatgaacagacttgttctgcatgtcatggaacacttgct
gttgatgatccacgcactgcctgtaacatcgttgtgttcttctgtagacatgcattccat
gaggattgtctccccgcacataatatggaaacatgtaatatatgccatgcacagagaaga
acacctggcacatcatccatgttcaggagttga
DBGET
integrated database retrieval system
