Saccoglossus kowalevskii (acorn worm): 100371341
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Entry
100371341 CDS
T04123
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100371341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100371341
03036 Chromosome and associated proteins [BR:
sko03036
]
100371341
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100371341
Coactivators
SAGA/TFTC/STAGA complex
100371341
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100371341
STAGA complex
100371341
TFTC complex
100371341
SAGA complex
100371341
SLIK complex
100371341
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_SCAP
DSE1_N
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CFAP251_N
PAC11
Beta-prop_IFT140_1st
Beta-prop_WDR41
ASA1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Aladin
WD_LRWD1
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Beta-prop_HPS5
RMC1_N
WD40_RFWD3
Beta-prop_EIPR1
Tricorn_2nd
Beta-prop_WDR19_1st
WD40_like
Beta-prop_DCAF12
TRM82_WD
LisH
LisH_SSDP
Motif
Other DBs
NCBI-GeneID:
100371341
NCBI-ProteinID:
XP_006824247
UniProt:
A0ABM0MW56
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MMKRVRGEDISSAVMNYLKKRQYTDSETSFKKEIKCSRAVTEMASDVTMDMETSVTNTVS
YTTCDPEPMLFDIQFSRLKTFIEEGVEEFKVELVAVLYPLFVNLYIEMICQGHKAAGNDF
LYKYQDEFTANEEQRTMMDNLCGVIQKDDVLSKVDVKLFRESKYLIQLSNTTLEYLLRYL
QSNDNTILLKMFNNHLHVVVQGLHNGDHDPNENGFIKTNISVETEAAKKKSSSSVMLRSL
KDCIQKIRDGPPSLPSILYYSFSNTYQGLNTVRVSPDQRLLCGGFEDSALRVWSLSPTKL
KAAEHTVDISKIHSLGDHICDKFQEDRVGIESKALRGHSGPVYAACFTVDSSHLLSSSED
TTVRLWDLDTYTNKVVYQGHNYPIWDMDTGSVGPYFATASQDHTARLWTLDRNYPLRIFA
GHLMDVDCVRFHPNCNYIATGSSDRTVRLWSVQDGKCVRLFTGHKGTVFSLAFSPNGKFL
ASSGEDRKVKLWDLGSGNMVKELSGHQDNVYSLNFSNDSTMLASGGLDNTIRVWDVRQSF
SPSSHSDTGVSLEILGSFPMRTSSVHYLEFVSCNLLLAAGAINVTQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagggtacggggagaagatatttcatccgctgttatgaattatttaaaaaag
agacaatacactgatagtgaaacgtcattcaagaaagagatcaagtgtagtcgtgctgtc
accgagatggcaagtgatgttaccatggatatggaaaccagtgtaacaaatactgtctct
tatacaacctgtgatcctgaaccaatgttgtttgacatacaattttcaagactcaagacg
tttattgaagaaggagttgaggagttcaaggttgaactggttgctgtcttgtatccatta
tttgtaaacctgtatatcgagatgatatgtcagggacacaaagcagcaggaaatgatttt
ctgtataaataccaagatgaatttactgcaaatgaagaacaaagaacaatgatggataat
ttatgcggagttattcagaaggacgatgttcttagtaaagttgatgtcaaacttttccgt
gagagtaagtacctgatccagttatccaatacaacattagaatacctattacgttaccta
caaagtaatgataatacaattttattgaaaatgtttaataatcaccttcatgttgtagtt
caaggtcttcacaatggagatcatgacccaaatgagaacggtttcataaagaccaatatt
tccgtggaaactgaggcagctaaaaagaagtctagcagttcagtgatgttgaggtcattg
aaggattgtattcagaagattcgtgatggtccaccttcactgccatcgatactgtattat
agctttagcaacacatatcaagggttgaatactgtgagggtatctccggatcagagattg
ctgtgtggtggatttgaagactcggccctcagagtatggagcctatcaccaactaaatta
aaagctgccgagcacactgtggatatatctaagatacactcacttggagaccatatttgt
gataaattccaggaagatagggtgggaattgaaagtaaagcactccgaggtcacagcggt
ccagtctatgcagcttgttttacagtagattcatctcatttattatccagttcagaagat
actacagtacgtttgtgggatctagacacatatactaataaagtagtgtaccaaggtcac
aactaccctatatgggacatggatactggtagtgtggggccatattttgccactgcttcc
caagaccacactgcaagactatggacattggatagaaactatccattgaggatatttgcc
ggtcacttaatggatgtagattgtgtgaggtttcacccaaactgtaactatatagcaaca
ggctcctctgatagaactgtccgactgtggagtgtacaagatgggaaatgtgttaggttg
tttaccggacataaggggacagtgttcagcttggcgttttcaccaaatggaaagttcctt
gcatcctcgggggaagaccggaaagtcaaactctgggatttaggatctggaaatatggta
aaagaactttccggacatcaagataatgtatattcattgaactttagtaacgacagtact
atgttagcatcgggtggattggataacactatccgtgtgtgggatgtcaggcagtcattc
agtccaagttcacactctgatactggcgtgtcactagaaatattaggatctttcccaatg
aggacttcttcagtacattatttagagtttgtgtcttgtaatctattgctagcagctggt
gctataaatgtgacacagtag
DBGET
integrated database retrieval system
