Saccoglossus kowalevskii (acorn worm): 100371838
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Entry
100371838 CDS
T04123
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sko03037
]
100371838
Cilium and associated proteins [BR:
sko03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100371838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_6
TPR_19
TPR_8
TPR_14
TPR_16
TPR_7
ANAPC3
TPR_11
TPR_17
TPR_10
TPR_9
ARM_TT21_5th
TPR_CcmH_CycH
ARM_TT21_4th
TPR_21
TPR-S
HAT_PRP39_C
TPR_MalT
HEAT_Nup120
TPR_15
ARM_TT21_2nd
DUF4810
RNPP_C
Motif
Other DBs
NCBI-GeneID:
100371838
NCBI-ProteinID:
XP_006822667
LinkDB
All DBs
Position
Un
AA seq
831 aa
AA seq
DB search
MQNIHLASEEDLYSGYNDYNPSLDPENLDDDASFQQAVKTSHGRRPPMTGRAPGTAARGR
LATTMRGRAGMPSSMGRPTTGAVGADGGVARPMTAVRAAGYTSGGNRGASFDPLNQRGPA
PPLEVKNEDTPEEKIKQLEKKVNELIEESCFAANRGELNLALEKAKEAGRKERILVRQRE
QMAANDQINLDLTYSVLFNLANMYEANEMFSEALNTYQVIVKNKMFSNAGRLKVNMGNIY
FKQRNYPKAVKFYRMALDQVPNTHKDMRIKIMQNIGVVFVKMGQYSDAITSFEHIMGEKP
DFRTSFNLILCYFAIGDRDKMKRSFQRLLQVDLHIDDEDKYLPHPDDQHANMVLEAIKND
TLRQEEKKIKSDMERYVMASAKIIAPAIEQTFAAGYDWCVDCVKSSLYTDLANDLEINKA
VMYLKQKDTTQAIETLKGFEKKDSKCASAASTNLSFLYFLQNDYQLADKYAEMAIQADRY
NPYAMVNKGNCLFAQGDYEKAREYYQEAGRTDSSCTEALYNLGLTNKKINLLEDALDCFL
KLHAILRNSPQVLYHLATLYEMLEDSAQASEWYMQLIGVVTTDPGILARLGEIYDNEGDK
SQAFQYHYESYRYFPSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVIQPTQSKWQLMIAS
CHRRSGNYQQALETYKHIHKKFPENIECLKFLVRLCTDMGLTKDAQDYATKLKKAEKAKE
VREQRANSATRRSGSGRGTRSGSAGSDSGRAGSGGSSAGSRSGTRGNRSSSGRLRGLPDT
SEPYEQEQEVDASYVDPLGPSMERPKTAARSRDKAEDDFADEELGEDLLPE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatatacatttagcttcagaagaagatctatattcaggatataatgattataac
ccgtcattggatcctgagaatctagatgatgatgcaagctttcagcaagcagtgaaaacc
agtcatggaagaagacctcctatgactggtagagccccaggtactgcagctagaggtcgg
ctggcgactacaatgcgtggtagagctggtatgccttcttctatgggaagaccaacaact
ggagcagtaggggcggatggtggtgtagcccgaccaatgacagcagttcgtgcagctgga
tacacatcaggtggaaatcgcggtgcatcttttgatccattaaatcaacgagggccagca
ccacccctggaagtcaaaaatgaggatacccctgaagagaaaataaagcagcttgaaaag
aaggtcaatgaactgattgaagagagttgttttgctgcaaacagaggagaacttaatttg
gcgttagagaaagccaaggaagccggtagaaaagaacgtatattagtaagacagagagag
cagatggcagctaatgaccagattaatttggacttaacatactcagttttattcaactta
gccaacatgtatgaagctaatgaaatgttctctgaagcactcaacacataccaagtcatt
gtgaaaaataaaatgttttctaatgcaggacgactgaaagtcaatatgggtaatatttat
ttcaagcaacgtaattatcctaaagctgttaagttttatcgaatggctttagatcaagta
cctaatacacataaagatatgagaattaaaataatgcagaacattggcgtggtgtttgtt
aagatgggtcagtacagtgatgctattacatcatttgagcatatcatgggggagaaacct
gacttcagaacgtcattcaatctcatcctgtgttactttgctattggtgatcgtgataaa
atgaagagaagtttccaacgcttattacaggttgatttacatattgatgatgaggacaaa
tacttgcctcaccctgatgaccagcatgctaatatggtactggaagctatcaagaatgat
actctgagacaagaagaaaaaaagattaaaagtgatatggagagatacgtcatggcatcc
gctaaaataatagcaccagctattgagcagacctttgctgctggctatgattggtgtgtg
gattgtgtaaagtcttcactttatacagatttagccaatgatttggaaatcaacaaagct
gtcatgtatctcaaacaaaaagatacaacccaggctatagagacactgaagggatttgag
aagaaggattctaagtgtgcaagtgctgcctccaccaatctatcatttttgtatttttta
caaaatgactatcagttagctgacaagtatgctgaaatggcaatacaagctgatagatac
aatccatatgcaatggtaaataaaggcaactgtctgtttgcacaaggcgattatgagaaa
gctagggagtactatcaagaagctggtaggacagattcatcttgtacagaagcattgtac
aacctaggattaaccaacaagaagataaatctcctggaagatgctttggattgttttcta
aagttacacgctatattacgtaacagtccacaagtgttatatcacttggctactctgtat
gaaatgctagaggattcagcgcaggcatcagaatggtacatgcaactaataggcgttgtc
actacggatcctggtattttggccagattaggagagatatacgacaatgaaggtgacaaa
tcacaggcattccagtatcattacgagtcctatcgttacttcccgtctaacattgagatt
attgagtggttaggtgcttactatattgactctcagttttgtgagaaagctattcattat
tttgagcgagctgccgtgatacaaccaacacagagtaaatggcagttgatgattgctagt
tgtcatcgacgaagtggcaactaccagcaggcattggaaacttacaaacatatacacaag
aaattcccagaaaacattgaatgtttaaagtttctagttcgtctatgtactgatatgggt
ttgactaaggatgctcaagactatgctacaaaactgaagaaagcagagaaagctaaagaa
gtacgagaacagagagccaatagtgcaactcgccgttctggaagcggccgtggtacacgt
tctggaagtgcaggtagtgattctggtcgtgcaggtagtggtggcagtagtgctggtagc
cgttctggcacccgtggtaaccgctccagtagtgggcgtctaagaggtcttcctgatacg
agtgaaccatacgaacaagagcaggaagttgatgcatcctatgttgatccactgggacca
agtatggaaagacccaagactgctgcaagatcaagagataaagcagaagatgactttgct
gatgaagaacttggtgaagacttgttaccagaataa
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integrated database retrieval system
