KEGG   Saccoglossus kowalevskii (acorn worm): 100372314
Entry
100372314         CDS       T04123                                 
Name
(RefSeq) DNA excision repair protein ERCC-8-like
  KO
K10570  DNA excision repair protein ERCC-8
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03420  Nucleotide excision repair
sko04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100372314
  09124 Replication and repair
   03420 Nucleotide excision repair
    100372314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sko04121]
    100372314
   03400 DNA repair and recombination proteins [BR:sko03400]
    100372314
Ubiquitin system [BR:sko04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100372314
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100372314
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_EIPR1 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_1st WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_Vps41 FLgD_tudor Beta-prop_WDR11_1st Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 100372314
NCBI-ProteinID: XP_002733656
LinkDB
Position
Un
AA seq 396 aa
MLSFLSARENGTHRPSALSRAEATRRIFSLELSKDRDVQRIHDSGVNTLDIDPVEGRYLL
SGGTEGVIVICDLECRPQENYTCPSVCTIGRSSRHVHKYSVDTVQWYSHDTGLFTSSSMD
KTLKVWDTNALKPADVFRFETIVYDHNMSSVATKHCLIAVGTIHSQVVLCDLKSGSSTHV
LRGHKASVLSVKWSPRDEFLLASGSRDSKIMLWDVRRAKSCLSILDQHNGEKGKGSTEAV
NTAHNGHVNGLSFTSDGLYLVSFGTDDRLRLWDTMSGKNTLVNYGKVDNVSRKGSKFTVS
YGGSPDVAFVPMGSNIAVFDIYTGEYVATLIGHYNNVNCCTFHPLYQELYSAGNDSNILI
WEPELGQKTDVAEKKDNKQSSSTVGNAVQDTWSDED
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgctaagctttctctccgcgcgagaaaacgggactcatcggccgagtgctttgtcaaga
gctgaagcgactcggaggatcttcagtttggaactgagtaaagacagagatgtgcaacga
attcacgatagtggagtcaacacactggatatcgacccagttgagggaagatacttatta
tctggtggaactgagggtgtgattgttatatgcgatttagaatgtagaccacaggaaaat
tacacctgtccatcagtctgcactattggacgatcttctcgtcatgttcacaaatacagt
gtagacacagtgcaatggtattcacatgacactggtctattcacttcaagctccatggat
aaaactttaaaagtgtgggataccaatgcgttgaaaccagctgatgtgttccggtttgaa
accatagtttatgatcataatatgtcatccgtggcaacaaaacattgtcttatagcagtt
ggtaccatccattctcaggttgttctttgtgatctcaaatcaggatcgtcaactcatgtt
cttcggggacataaagcgtctgtactctcagtaaaatggtcaccaagagatgaattcttg
ctagcaagtggaagtcgagacagtaaaataatgctatgggacgtacggagagctaagagc
tgcttgtcaattctggaccaacataatggagaaaaaggaaaaggatcaacagaagcagtg
aacacagctcataatggtcatgtgaatggactttccttcacaagtgatggcctgtatcta
gtaagttttggcacagatgaccggctgagactttgggatacgatgtctgggaaaaacaca
ctggtaaactatgggaaagttgacaatgtcagtcgtaaaggttcaaagttcacagtatct
tacggagggtcacctgacgtggcgtttgtgcctatgggcagtaacattgctgtatttgat
atctacactggagagtacgttgctactctaatcggccactataataacgtcaattgctgt
acattccatcctttataccaggagctgtacagtgctggtaatgatagcaatatattaata
tgggaaccagaactgggacaaaaaacagatgtggctgagaagaaagacaataagcaatca
agttcaaccgttggaaatgcagttcaagatacatggagtgatgaagactag

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