Saccoglossus kowalevskii (acorn worm): 100372356
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Entry
100372356 CDS
T04123
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
sko03015
mRNA surveillance pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100372356
09122 Translation
03013 Nucleocytoplasmic transport
100372356
03015 mRNA surveillance pathway
100372356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100372356
03041 Spliceosome [BR:
sko03041
]
100372356
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100372356
Spliceosome [BR:
sko03041
]
Complex C
Other components
EJC/TREX
100372356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100372356
NCBI-ProteinID:
XP_006812398
LinkDB
All DBs
Position
Un
AA seq
956 aa
AA seq
DB search
MADIKDADLTISGKRIDALRVIDLKAELKKRGLSNSGTKSQLIKRLKTQVTLEKMQENSQ
SDILPSEKIAADETVGSNAFIQQYMKQQQALLAQRESLQAAAAAHQAEIQEEKEEEATKQ
RRQSESEKESLGAGIPTALADQVEELNQSLSKQKSDESDTTEEENGAVTEEIKVEVRSRK
KDVVEKQDDGKSEEREALESRQHGKGDSKGENAEVLESATADVQEESSKVIEKPCDTKNE
EEQAEVKIPKTKDDKKGKIDTETTEEAKGGKKIEVKSDRNEKPDLPEKVEELEKEVEDEA
KKKTDKKFSEVDVHSGDEKMVKEGEDGKEESREAKREIRSPSDSSSDSSSSSSSSSSSSD
EDEEDGQRMSSNVKSVDPQESSSESPSQSPIHVKEDPRDESYHTAPEAEMSMEERPQADQ
PSEPIKQKITKDKKSRWDSRQGEDRDDEPVIMDTEEGKSNDNDAESELEEKIVKSEEQEV
ETTVERKRAISPSKLAKSRKISISSKKKSDKNDSPVSTEGKAEQPRKRKWGSGRSKTTVS
SKKPAMSISTDSLKGIIPDIKAAQMEAVIDLAVEEEEEESRISDSEENHKEESPPSPEEI
PIRRTVTQIVPAQKQESMEEEKENKDEGMEVEDADADAVVKEEEVEKEDKMEVENEKEDI
ENKEPVKTIEVSEEKEEKVVVSPPKIIRRQLSNLPVDDPVITRRSQSPARMPVTKIVHVM
NLVRPFTINQLKELLSRSGTIVEEGFWIDKIKSHCFVTYSTEEEAIKTRDALHGTKWPSS
NPKNLIVEYAVQEEIDRHKGVAIAKTEVKVKMDIPPRERRDSYREREKERREKEKERDRE
REKERDRRRDSSREKRRRERDREERKVKVEPEEPPAKLLDDLFRKTKATPCIYWLPLTEE
QAVVKEKERQERKKQREEADAKLEKERQKREEERWRNDRRGRSRSRNRDQNRSRRR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattaaggacgcagacctgaccatcagcggaaaaagaatcgatgcgctgaga
gtcattgacctcaaggcagagctgaaaaagcgtgggttgtccaacagtggtaccaagagt
caacttataaaacgtttgaaaactcaagtgacactggagaaaatgcaagagaattcacag
tcagatattttaccaagtgaaaaaattgctgcagatgaaactgtgggctccaatgctttt
attcaacagtatatgaagcaacaacaagcattgctagctcaacgagagtctttacaagct
gccgctgcagcacaccaggctgagatccaagaagaaaaagaggaagaagccacgaaacag
cgaagacagtcagaaagtgaaaaggagtcattgggtgctggtatccctactgctctcgct
gaccaggttgaagaattgaatcagtcactgagcaaacaaaaatctgatgaaagtgataca
acagaagaagagaatggggctgtcacagaagagattaaagtggaagttagatccagaaag
aaagatgttgtagaaaaacaagatgatgggaaatctgaggagagagaggctcttgaaagt
agacagcatggtaaaggtgacagtaagggagaaaatgcagaggtgttggaatcagcaact
gcagatgtacaggaggagagttcaaaggtcattgagaagccatgtgacacaaagaacgaa
gaggaacaagcagaggtaaaaattcccaaaactaaagatgacaaaaaaggaaaaattgac
actgagacaactgaggaggcaaaaggaggtaagaaaattgaggtgaaaagtgatcgtaac
gaaaaacctgatctaccagaaaaggttgaagaactagaaaaagaagtagaagatgaagct
aagaagaaaaccgacaagaaattctctgaagtggatgtacatagtggtgatgagaaaatg
gtgaaggaaggtgaagatggtaaggaggagtccagggaagcaaaaagagaaatcagatct
ccatcagacagctcatccgattcatcttcctcctcttcttcttcctcctcttcatctgat
gaagatgaagaagatggtcagagaatgtcgtcaaatgtgaaatctgtagatccccaagag
agcagcagtgagagtcctagccagtcaccaattcatgtaaaagaagatccaagagatgag
agttaccacaccgcacctgaagctgagatgtccatggaagaaaggccacaagctgaccaa
ccaagtgaaccaattaaacagaagataacaaaggataaaaaaagccgatgggacagccgg
caaggagaagacagagatgatgagccagtcattatggatacagaagaaggcaaatcgaat
gacaatgatgcagagtctgagctagaggagaaaattgtgaaaagtgaagagcaggaagtg
gagacgacagtggaaagaaagagagccatctctcctagtaaactggcaaagtccagaaaa
atttcaatttcatctaaaaaaaaatctgataagaatgactcgccggtatcaacagaggga
aaggcagaacaacctaggaaaagaaaatggggaagtggaaggagtaaaacgactgtgagc
agtaagaaaccagctatgtccatcagtactgattcactcaaaggtatcataccagacatc
aaagcagctcagatggaggcagtcattgacttagcagtagaggaagaggaagaagaaagt
cgtatctcagactctgaagaaaaccacaaggaggaatctcctccatccccagaggagatc
ccaatcaggaggacagtcactcagatagtgcctgcacagaagcaagagagtatggaagaa
gagaaagaaaataaggatgagggaatggaggtggaggatgctgatgcagatgcggttgtg
aaagaggaggaggtggagaaggaagataagatggaggtagaaaatgaaaaagaagatatt
gagaataaagaaccagtgaaaaccattgaagttagtgaagaaaaagaagagaaagttgtt
gtatcacctccaaagattatacgtagacagttgtccaatctgccggtagacgatcccgtt
atcaccagacgttcacagagtcctgcacgaatgccagtcactaaaatagtccatgtgatg
aatctcgtccgtcctttcaccatcaatcaactaaaggagcttctgagtaggtctggtacc
atcgtggaagaaggcttctggattgacaaaattaaatcccactgttttgtaacttattca
acagaggaagaggcgatcaaaacaagggatgcacttcatggtacaaaatggccttcaagt
aatccgaaaaatttaattgtagaatatgccgtacaggaggagattgacagacataaggga
gttgcaatagcaaagacagaggttaaggtaaaaatggatataccgccaagagagagaaga
gattcatacagagaacgggaaaaggagcgaagggaaaaggaaaaggagcgggaccgcgag
agagaaaaggaaagagaccggcggagagacagttcgagagagaagagacgcagagaacga
gacagagaagagagaaaagtgaaagttgaaccagaagaaccgcctgccaaacttttagat
gatctgttcagaaagacaaaagccactccttgtatatattggctacctctcacagaagaa
caggctgtagtgaaagaaaaagaaagacaggaacgaaaaaaacagagagaagaggccgat
gcaaagctagagaaggagcgacagaaacgagaagaagaaaggtggcgtaatgacagacga
ggaagatcacggtcgaggaatagagatcaaaatcgaagtaggcgtcgctaa
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