Saccoglossus kowalevskii (acorn worm): 100372382
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Entry
100372382 CDS
T04123
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100372382
04121 Ubiquitin system [BR:
sko04121
]
100372382
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
Other 90S particles
100372382
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100372382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
MIOS_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
100372382
NCBI-ProteinID:
XP_002737907
LinkDB
All DBs
Position
Un
AA seq
442 aa
AA seq
DB search
MKVKVLSRNPDDCIRETKNDIHKVPRNYNPSLHPFEAAREYTRALNATKLERVFAKPFLG
SLDGHKDGVHCMSKHPTSLSTLLSGSCDGEIRLWNLASRRCTRSITAHTGFVRGLCCKPE
GNHFFSVGDDSTIKQWDMETSESDEPINTIIGKSIYISIDHHWKDAVFATCGQQVDIWDA
SRTDPIRSFTWGTDSIHSVKFNPIETHLLGSCAADRNIVLYDMRGAAPLRKVILDMKSNT
IAWNPIEAYIFTAANEDYNLYTFDMRRLDMPVKIHMDHVSAVLDVDYAPTGLEFVSGSFD
KSVRIFPTDKGRSREVYHTKRMQHVSCVKWSMDNKYVLSGSDETNIRVWKARASEKLGVM
RPREQAAMDYDAKLKDKFHHFPQLKRISRHRHVPKAIYSEAKTLRIQRDSKRRKESNRRK
HSKPGAVPIIPERKKHVVAEVQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaaggtactcagtcgaaatccagatgattgcatcagagaaactaaaaatgat
atacacaaagtaccgcgaaactataacccttccttacatccatttgaggctgctagagag
tacaccagagctttgaatgctacgaaattagaacgagtgtttgccaaaccttttctcgga
tcactagatggtcataaagatggtgtgcattgtatgtcaaaacatccaacaagtttatcc
accttgctgtctggaagctgtgatggagagattagactatggaatctggccagcagacgg
tgtaccagaagtatcacagcccatacagggtttgtcagagggctctgctgtaaacctgaa
ggaaatcatttcttttctgttggtgatgatagtacgataaaacagtgggacatggagaca
tcagagtctgatgaaccaatcaatactataataggaaagagtatttatatttcaattgat
caccattggaaagatgctgtatttgctacatgtggtcagcaagtggatatatgggacgcc
agtagaactgatcctattaggtcatttacatggggaacagacagtatacatagtgtcaaa
tttaatcctatagagacacatcttcttggaagttgtgctgctgacaggaatattgtctta
tatgacatgagaggagccgcacctctgagaaaagttattctagatatgaaatctaacacc
atagcgtggaatccaattgaagcgtacattttcactgccgctaatgaagactacaatctc
tatacttttgacatgagacgtcttgacatgccagtaaaaatccatatggaccatgtctct
gctgtcttagatgtggactatgcacctacaggtctggagtttgttagtggaagttttgat
aaatcagtcaggatattcccaactgacaagggacgtagtagggaagtatatcatacaaaa
cgaatgcaacatgtgtcctgtgtcaagtggtctatggataataaatacgttttatcaggg
tctgatgagaccaatattagagtttggaaagccagggcttcagagaaactcggggtgatg
cgaccaagagaacaagccgccatggattacgatgcaaaactaaaagacaaatttcatcat
ttcccacaactgaagaggatttctagacacagacatgtaccaaaagccatatattccgaa
gccaaaacattacgtattcagagagactccaaacgaagaaaggagtcaaacagaagaaag
cacagcaaacctggggctgttcccatcattccagagagaaaaaaacatgttgttgcagaa
gtacaataa
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