KEGG   Saccoglossus kowalevskii (acorn worm): 100372620
Entry
100372620         CDS       T04123                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:sko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sko03036]
    100372620
   03400 DNA repair and recombination proteins [BR:sko03400]
    100372620
Chromosome and associated proteins [BR:sko03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100372620
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100372620
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_2 HEAT_EF3_N HEAT_EZ HEAT_ECM29 HEAT
Other DBs
NCBI-GeneID: 100372620
NCBI-ProteinID: XP_006817162
LinkDB
Position
Un
AA seq 910 aa
MLALSTYDNLPKGCEVQLVQAIYKEVHVQSMIQVDRRSVYAILSNLLDTRIKDLQSLGRD
FVFGYIQCMDGEKDPRNLTMIFRCVPIIIHNFPIDVFIEELFEVVSCYFPIDFTPPPNDP
YKVTQEELVLGLRKCLAATPKFAEHCLPLLMEKLSSDVQRAKIDSFLTLAECCEVYGEDD
LMEFLPAMWSTIRREVFQAFSHEVEKSALTCLCSIVKTLSNAVSNANKAAGGLDEFLDLV
LKDCSKHLRDPGLRLMLPTSKLLQSAASASDPACYKIISAVVPILLEQFHKCKQVNERVS
LLHAALDFIKVCKSFTFGDDTPSPVIPFKDSLASLFLSLLSDHSSQLRCIGITGLVGLMS
LNAIMNINEKKLAAMHFTNIVLTDQDNKVCSEAVTALAFMSMEFSLLVKEEVLPQLIKEL
DSRATGTRHRFIVNTLAGISMHSDIVLTTIPVMLQHLGTLSEDNTAESLETAVNTIQSID
IVVNSNISDEQCLDFFHSKLLPQLLRITVDQALQVNNYILCKEDVVSSIATVCRNIAKVL
DDRVASNLVSNTISLFLDGNLENIGLKQSSQHFRPLEISSPWQHTQLVSLLTSIICSMKT
FELSSQCLELMEKLLKLSLSSEHHLTCVSAAKCYAGLVNKHKQGTDLDSSLETVVESTCR
MLQDEISDQNIYNRQKALTLWLWVTKALVLRAHFKSTQFTTKLISLFEDHQLSQMAADGF
YIILSESQDVLNKDMHCDIKLMYRQRLFMQTLPRILAGFEKANEDKKQYYLSALSHLLQF
IPKQVLLSELPPLMPMLVQSLYCQDVGLYVSTSDTLSMLIQDAPTVISLYVDTLLPQLLT
LSTYQQSMKVRIAALKCIGLFVTLPTHVIYPRQKEVVRRLASVLDDRKRLVRQQAVTARG
LWFLLEAPKK
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgctggctttgagtacatatgataatttaccaaaaggttgtgaggtacagttagtgcaa
gccatttacaaagaagttcatgtacaaagtatgattcaagttgacagaagatcagtttat
gcaatactttcaaatctgcttgatacaaggatcaaagatttacaaagtcttggaagagat
tttgtgtttggttacatccagtgtatggatggtgagaaagatccaaggaatctgacgatg
atattccgatgtgtaccaattattattcacaactttcccattgatgttttcattgaagaa
ctttttgaagttgtgtcatgctactttcccattgatttcactcctccgccaaatgatccc
tacaaagtcacacaagaagagctcgtcttaggtctcagaaagtgtctcgccgcgacgcca
aaatttgcagagcattgtttgccgttgttgatggagaagttatcgtctgatgtgcagcgt
gcaaagattgattcttttctcacattagccgagtgttgtgaagtgtatggtgaagatgat
ctcatggagtttttacccgcaatgtggtcaacaataagacgagaggtgttccaagctttt
agtcatgaagtagaaaaatctgctttaacttgcctgtgttctattgtgaaaacactgtcc
aatgctgtcagcaatgccaataaagccgctggtggtttggatgaatttttagacttggtc
ctaaaagattgtagtaaacatttacgagaccctggactgcgactgatgttaccaactagt
aagttactgcagtctgctgccagtgcatcagatccagcttgttataaaatcatttctgca
gttgtaccgatattactggagcagttccataagtgcaaacaggtgaatgaaagagtctct
ctgctgcatgctgcattggatttcatcaaagtctgtaaaagtttcacctttggagatgac
accccaagtccagttattccattcaaagactccctagcttctctgtttttatcacttctc
agtgatcacagctctcagctacgatgtattggaattactggactggttggacttatgtca
ttgaatgcaattatgaatattaatgagaagaagcttgcagctatgcatttcacaaatata
gttctgacagatcaagataacaaagtttgttctgaagctgtgacagcgctggcttttatg
tccatggagttctcattattagtaaaagaggaagtcctaccacaactgatcaaagaactt
gatagcagagccaccggtacaagacatcgttttatagtaaatacattagctggtatatcc
atgcattcagatatagtgttaacaacaattccagttatgctgcaacatcttggcacactc
agtgaagataacacagctgagtccctggaaactgccgtcaataccatacagagtatagac
atcgtagtcaattctaatatatcagatgaacaatgtctagactttttccattctaaatta
ttaccacaacttttaaggataaccgtagatcaagcattgcaagtaaacaattatatatta
tgtaaagaggatgttgtgagtagtattgctactgtatgtcgcaatattgccaaggtattg
gatgacagggttgcttcaaatcttgtatcaaacacaatatcactatttttagatggaaac
cttgaaaatattggtcttaaacaatcatcacaacattttcggccattggagatttcatca
ccatggcaacatacacagttagtgagtctgctaacttctataatttgttcaatgaagact
tttgagttgagttcacaatgtttggaattgatggaaaaactactgaagctgtccttgtct
agtgagcatcaccttacctgtgtgtccgctgctaaatgctacgctggactcgtcaacaaa
cacaaacaaggtactgatttggattcctcactcgagactgtagttgaatcaacctgtagg
atgcttcaagatgagatttcagaccaaaatatttataaccgacagaaggcattaacactc
tggttatgggtgactaaagcactggtattaagagcacatttcaaatcaacgcaatttaca
accaagttaatttctttatttgaagaccatcaactttctcagatggcagctgatggtttt
tacatcattctaagtgaaagtcaagatgtattgaataaagatatgcattgtgatattaaa
ttaatgtacagacagagattatttatgcagacattgccaagaatactggcaggatttgag
aaagcaaatgaagacaagaaacaatattacttgagtgcattgtctcatctcctgcagttt
ataccaaaacaagtattgctaagtgagttacctccactgatgccaatgttagtacagtcg
ctgtactgtcaagatgttggattatacgtctctacgtcagacacgttgtccatgctgata
caggatgcacccactgtaatatcactgtatgtagataccttgctgccacaactattgaca
ttaagtacatatcaacaaagtatgaaagtgagaatagccgctctgaaatgcattggtttg
tttgtcactctgcctacccatgtgatatatcctcgacaaaaggaagtagtcaggagattg
gcatccgttttagatgacaggaaaagacttgtcagacaacaagcagtaacagcaagggga
ctgtggtttctacttgaagcaccaaagaaatga

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