KEGG T04123: 100372914

Saccoglossus kowalevskii (acorn worm): 100372914

Entry

100372914         CDS       T04123

Name

(RefSeq) cell division cycle 5-like protein-like

K12860

pre-mRNA-splicing factor CDC5/CEF1

Organism

sko Saccoglossus kowalevskii (acorn worm)

Pathway

sko03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:sko00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100372914
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sko03041]
    100372914
   03400 DNA repair and recombination proteins [BR:sko03400]
    100372914
Spliceosome [BR:sko03041]
Complex B
  Other components
   Prp19 complex
    100372914
Complex C
   Prp19-CDC5 complex
    100372914
DNA repair and recombination proteins [BR:sko03400]
Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100372914

SSDB

Motif

Pfam:

Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C Intein_splicing

Other DBs

NCBI-GeneID:

100372914

NCBI-ProteinID:

XP_002733954

LinkDB

Position

AA seq 796 aa
MPRINIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTAAQCLERYEQLLDQAQQKEGDAEMDDPR
KLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARR
LAALQKRRELRAAGIEIHKHRKKKRGVDYNAEIPFEKKPAPGFYDVSDETVSELDPNFKR
LRQQDMDGLRRDEIEERERKKDKQKLKRKKENDLPSAIAQTNKFQEPVKKRSKLVLPSPQ
ISEQELEEVVKLGHASENARLTAEEGGSMNGPSQALLSDYSVTPQITSLRTPKVPASQDT
VLQEAQNIMALQNVDTPLKGGLNTPLHESDFDGITPKRQATATPNTAFTTPFRTPSHGEG
MTPKAMTPKALVPVAVTPGQTPGRTPVRDKLNINPEEQLGEIDDVRYAKHLQREMKEQLR
KGLSSLPAPRNDFEIVIPESEDADKTEIEGDKNFVEDASDVDNRKVALRTAEQEREWKRQ
SQVIQRLLPRPSDINISILRPSNIEQPLSDLQKAEELIKREMITMLHHDALKHPSIDKKS
SQGLHLQYLEQHPFIVVEDEDMKQARELLKKEMEVVKSGMGHGDLTADTYKQVWDECNSQ
CLFLPSQNRYTRANLASKKDRIESAEKKLEINRTHMTREAKRAAKMEKRLKVLLGGYQSR
ALGLTKQLHDVFENLEQTYVEMKTFESLKKNEDVAIPKRIASLQEDMKRQTEREKELQKQ
FSELSYDRDRLLATIH

NT seq 2391 nt +upstreamnt +downstreamnt
atgccgcgaattaatattaaaggcggtgtgtggagaaacactgaggatgagatcttgaaa
gcggctgttatgaaatatggcaaaaatcagtggtcacgtattgcatcacttttacacaga
aaatcagccaaacaatgtaaagctagatggtatgaatggttggatccaagcatcaagaaa
accgaatggagtcgagaagaagacgaaaagttattacatcttgctaaattgatgccaaca
caatggagaacaattgcaccaatcgtaggaagaacggccgctcagtgtttagagagatat
gaacagctgttggatcaagcccagcagaaagaaggagatgccgagatggatgatccacgc
aagttaaaacctggagaaatagacccaaatccagaaaccaaaccagctaggcctgatcct
attgacatggatgaagatgaattggaaatgctgtcagaggccagagcacgtttagctaac
acacagggaaaaaaagccaaaagaaaagccagagaaaaacaacttgaagaagctcgaaga
ttggctgcattgcagaaaagacgagaactgagagcggctggtattgagatccacaaacat
agaaaaaagaaacgtggtgttgattataatgctgagattccatttgaaaagaaacctgca
cctggattctatgatgtttcagatgaaaccgtttctgaattagatcctaatttcaagaga
ttaagacaacaagatatggatggccttagacgagacgaaattgaagagagggaaagaaag
aaagataaacaaaaactgaaaaggaagaaagaaaatgatttgccttcagctattgcacag
accaataaatttcaagagcctgtgaaaaaacgaagcaaacttgtgttgccatctccacag
atatcagaacaagagctagaagaggttgttaaattgggtcatgccagtgagaatgctaga
ctgacagccgaggaaggaggctctatgaatggcccatcacaggctttgttatcagattat
tcagtcacaccccagatcacaagtttaagaacaccaaaagtaccagcatctcaagataca
gtattacaggaagcacagaatattatggcgttacagaatgtggacactccattgaaaggt
ggactgaacacaccgcttcatgaaagtgattttgacggaattacaccaaaaagacaagct
actgcaacaccaaacactgcttttacaacaccatttagaacaccttcacatggagaaggt
atgacaccaaaagccatgacacctaaagcattggtacctgtggctgtcacgccaggacag
acacctggtaggacaccagtcagggataagctgaatatcaatcctgaagaacaacttggt
gaaatagatgacgttagatatgctaaacacctacagagagaaatgaaagaacagttaaga
aaaggtctgtcatctttaccagctccaaggaatgattttgaaattgttataccagaatca
gaagatgctgataaaactgaaattgaaggcgataagaactttgtagaagatgcatctgat
gttgataacaggaaggtagccctgagaactgcagaacaagaacgggaatggaaacgtcaa
tcacaagtcatacaaagattgttaccaagaccgtcagacatcaatatttctatcttgaga
ccttctaatattgagcagccgctttctgatcttcaaaaggccgaggagttgataaaacgt
gaaatgataacgatgcttcatcacgatgctttaaaacatccttcaatagacaaaaaaagc
agtcaaggtcttcatctgcagtatttagaacaacatccatttattgtggtggaagatgag
gacatgaaacaggctagagagttgttaaagaaagagatggaagttgtcaagtctggtatg
ggtcacggtgacctgactgcagatacgtataaacaagtatgggatgagtgtaatagtcag
tgtttatttttaccatctcaaaatcgttataccagagctaacttggctagtaaaaaagat
aggatagaatcagctgagaaaaaactagagattaaccgaacacacatgacgagggaagct
aaacgagctgccaagatggaaaaacgattgaaggttttacttggcggctaccaatcacgg
gcgctaggccttactaaacaacttcatgatgtatttgagaatcttgagcagacctatgtg
gagatgaaaacatttgaatctctgaagaagaatgaagatgttgccattccaaaaagaata
gcatcgttacaagaagacatgaagaggcaaactgagagagaaaaagaactacaaaagcag
ttttctgagttgagctatgatagagatagattactggcaacgatacattga

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