Saccoglossus kowalevskii (acorn worm): 100373010
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Entry
100373010 CDS
T04123
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100373010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100373010
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100373010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
100373010
NCBI-ProteinID:
XP_002731241
LinkDB
All DBs
Position
Un
AA seq
520 aa
AA seq
DB search
MASTSRAGGNFGVAAPSNEYNEFSVRVPKNTGKKYSIMKINSNEKIDISKWPQTKIEREN
NMREFKPDDEVIPTHGAGSEFGRERREEARKKKYGIITKSYKPEHQPWILKQSGKNGKRY
KGKKEGGITDNSSYYIFMQGPDGAFEAFPLDSWYNFTPTITYKTLNAEEAEEEYGRRDKV
MNYFSIMVKKRLKEEDDEEDGKVTLQQIKNIDGLQITEGDEYQGFMSEEDEDSDDEDGVE
KKKKPKTKPKSKEKSTKKKKKKESDDEEEPLEESDEGDFDGREFDYLSEASSEGELETTK
DDLKGLDQELSGDEDEESDVENEENKEGNEEEDANKKAEATKEKEVFQSSDSGSDSDDSD
DLDKTELKSALFIQKSEKSQKKSSNRASPSASGSSSRSGTPTTLLDAAVTSSTLTAVASK
LQHNKRKGIDDGPPSKRAKGSPAPASGTRTPVGDIGITEDMVMRYLKRKPMTTKDLLHKL
RAKKTGMKRDEIVRTLTDIIRKLNPQKINHKDKTLWFIKS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctagcacatcacgggctggtggtaattttggtgttgctgctccttctaatgaatac
aatgaattctctgttagagtacctaagaatactggcaagaaatacagcattatgaagatc
aattcaaatgaaaaaatagatatttcaaaatggccgcagactaaaattgaaagagagaat
aacatgagagagttcaaacccgatgatgaagtaataccaactcatggagctggcagtgaa
tttggacgggaacgacgtgaagaagcacggaaaaagaaatatggcataataacgaaatct
tacaaacccgaacatcagccatggattctaaaacaatctggaaaaaatggaaagaggtat
aaaggtaaaaaggaaggaggaatcacagataattcatcgtattacatattcatgcaaggt
ccagacggtgcttttgaggcgttcccattggattcttggtataatttcacaccaacaata
acatataaaacactgaatgcagaggaggctgaagaagaatatggaagaagagacaaagtt
atgaattacttttcaattatggtgaaaaaaagattgaaggaagaggatgatgaagaagac
ggtaaagtaactttacaacaaattaaaaacattgatggattgcaaatcacggagggagac
gaatatcaaggattcatgtcggaagaagatgaggatagtgacgatgaagatggcgtagag
aaaaaaaagaaaccaaagacaaaaccaaaatctaaagaaaaatcaacaaaaaagaaaaag
aaaaaagaatctgatgatgaagaggagccattggaggaatcagatgaaggagattttgat
ggcagagaatttgattatttgtctgaagcgtcgagtgaaggtgaactagaaaccaccaag
gatgatctgaaagggttggatcaggagttgtcaggtgacgaggatgaagagtctgatgtg
gagaatgaggagaacaaagaaggcaacgaagaagaggatgcaaataagaaagcagaagct
actaaagaaaaagaagtatttcaaagtagtgacagtggttctgattctgatgacagcgat
gatttagacaaaacagaactcaaatctgctctctttatccagaaatctgaaaaaagtcaa
aagaagtctagtaacagggcatctccatctgctagtggtagtagtagtagaagtggtaca
ccaaccacgttattagatgcagcagtgacatcatcaactttaactgcagtagctagtaaa
ttgcagcacaataaacgtaaaggaatagatgatggaccgccatccaagagagcaaaaggc
agtcctgctccagcatctggaactagaacaccggttggtgatattggaatcaccgaggat
atggtaatgagatacctgaagcgtaaaccaatgacaaccaaggacttactgcataaatta
cgagccaaaaagactgggatgaaacgtgatgaaattgtacgaacattgacagacattatc
aggaagttgaatccgcaaaagatcaatcacaaagataaaacattgtggtttataaaatca
taa
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