Saccoglossus kowalevskii (acorn worm): 100373238
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Entry
100373238 CDS
T04123
Name
(RefSeq) nucleoporin GLE1-like
KO
K18723
nucleoporin GLE1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
sko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100373238
03015 mRNA surveillance pathway
100373238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100373238
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100373238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
PRIMA1
wHTH-PRTase_assc
Motif
Other DBs
NCBI-GeneID:
100373238
NCBI-ProteinID:
XP_006824341
LinkDB
All DBs
Position
Un
AA seq
544 aa
AA seq
DB search
MSSTIDALRSSSKGKLKYDPHWHEQGRAKQVLDECASPPTLSLRSRRDVLDCSDDSMSEA
ASVISQQSSDVSGPHVKVTSIEPVIDSSDSMSCSSIEDSLVHSPTILNGCIEVSIMQCEK
YWEKKAEFAAKLVREKQELYWKTLKVQAEQQLAALERKAELDERKAAERLQMLEMRTREE
SRKRQLKRKEDVKHHAVMVETKMKAVEAKRGQELEEEKKKTEEAKKILSHVSNLHHLVNL
YTDRATQLLANCKHKEFITENVKNLTDHIRVLKEVSDHVLSDAQSKEMAIAELETMGKVY
TKAKQVVEQTNKIVGDAEKRGNEEMERKKAAEEAEKLAQSTPAPPPPPPPPPLPPPTTTS
VPPTSKTDSTTAATAVSTPGELESNITAEAFREYKALQEKRQAILESIKDLTETKDSQLK
KYRMDLQKAVNVTINTIANQSGSHLIEKVQRLHSLLSGRSVPVQATGRQRQGGEQVSSSH
DSAFPIAAVAVGVWAEFPDFGDLLLAHFHLACPYLVPYYIPKKDGQSEEDYYKYVRYSFC
SSIL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacgatagatgcattgcgatcttcaagtaaaggaaagttgaaatatgatccc
cactggcacgaacaaggaagagcgaagcaagttcttgatgaatgcgcttcaccacctaca
ttatcactgaggtcacggagagatgtactggactgctctgatgattctatgtccgaagca
gccagcgtgatcagtcaacaaagcagcgatgtaagtggcccacatgtcaaggtcacaagc
attgaaccagtcatagacagcagtgacagtatgagttgctcctcaatagaagactccctt
gttcattcacccactatcctgaatggctgtattgaggtctctattatgcagtgtgagaag
tattgggagaaaaaagctgagtttgcagctaaactagtaagagagaagcaagaactctac
tggaagactctaaaagtacaagctgaacagcagctagctgcgcttgagaggaaagccgag
cttgacgaaaggaaagcggcggagcggcttcagatgcttgaaatgaggactcgagaagag
agcagaaagagacagctgaaaaggaaagaagacgtaaaacaccatgcagtgatggtggaa
actaaaatgaaggcagttgaagctaaaagaggccaagagcttgaagaagagaaaaaaaaa
actgaagaagccaagaagattctaagccatgtgtccaatcttcatcaccttgtcaatctg
tacactgacagggcaacacaactgctggcaaactgtaaacacaaagaatttataacagag
aatgtcaaaaatctgacagatcacatccgagtgttgaaagaggtgtcagaccatgtactg
tctgatgcacagtccaaagagatggcaatcgcagagctggaaacaatgggtaaagtctat
accaaagctaagcaggtagttgaacagacaaacaaaattgtaggagatgctgaaaaaaga
ggaaatgaagagatggagagaaaaaaagctgctgaagaggctgaaaagctagcacagtca
acacctgcacctccaccaccaccaccaccaccaccactaccaccaccaacaaccacatct
gtacctcctacttcaaaaacagatagtactacagctgcaactgctgttagcactccaggt
gaactagaaagtaatatcacagcggaggcattcagagaatacaaagcgttacaggaaaaa
aggcaagcaatacttgaatccatcaaagatctgacggaaactaaagactcccagttgaag
aagtacagaatggatttacagaaagctgtcaacgtaaccatcaatacgatagcgaatcaa
tctggtagtcacctcatagaaaaagtacagcgattacattccctgctgtctggaagatcg
gtgccggtgcaggcaactgggagacaaagacaaggcggtgaacaggtgtcttccagtcac
gactcagcttttcctatagcggccgtagcagttggtgtctgggcagaattccccgatttt
ggggacctcttgttggcgcacttccatttagcgtgtccatatttggtgccgtattatata
ccgaaaaaagatggtcagtcagaagaagattattacaagtatgtacgatattcattttgt
agttctatactgtga
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