KEGG   Saccoglossus kowalevskii (acorn worm): 100373524
Entry
100373524         CDS       T04123                                 
Name
(RefSeq) WD repeat-containing protein 61-like
  KO
K12602  WD repeat-containing protein 61
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100373524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100373524
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     100373524
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_WDR41 Tricorn_2nd Beta-prop_IFT140_1st RMC1_N Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Ge1_WD40 Beta-prop_DCAF4 Cytochrom_D1 Beta-prop_HPS5 PROPPIN Beta-prop_EIPR1 NBCH_WD40 Beta-prop_WDR75_2nd Beta-prop_DCAF12 WD_LRWD1 Beta-prop_NUP159_NUP214 DUF7165 WDR54 Nucleoporin_N Beta-prop_IFT122_2nd Beta-prop_RSE1_2nd Beta-prop_pof12
Other DBs
NCBI-GeneID: 100373524
NCBI-ProteinID: XP_002736992
UniProt: A0ABM0GTF8
LinkDB
Position
Un
AA seq 305 aa
MPLMYTVQLKQEQAHDDSIWSVAWAKSEKDGSDIIATGSVDDYVKIWKWENEQLDLRYSL
EGHQLGVVSVDINQTGTIAASSSLDSHIRLWDLESGKQLKTMDAGPVDAWTIAFSPDCKY
LATGSHTGKINLFGVESGRKESALDTRGKFTLSIAYSPDGKYIASGAIDGIVNIFDIHTG
KLLHTLEGHAMPIRSLCFSPDSQLLATASDDGHIKIYDVQHANLAGTLSGHGSWVLSVNF
SPDNTHFVSSSSDKSVKIWDAGTRQCIATFYDHYDQVWQAKYNGNGSKIVSVSDDRAIHI
YDCPL
NT seq 918 nt   +upstreamnt  +downstreamnt
atgccgctgatgtacacagttcagctcaaacaagagcaggcccatgatgacagcatatgg
agtgtagcatgggcaaagagtgaaaaagatggttctgatattattgctactggatctgtg
gatgattatgtgaaaatatggaaatgggagaatgaacagcttgatttgaggtactcattg
gaaggtcatcagcttggtgtggtctcggtggatatcaaccaaactggcacaattgccgct
tccagctctttagacagccatataagactatgggatttagaaagtggcaaacagttgaaa
actatggatgctggtcctgtagatgcatggacgatagcattctcaccagattgtaaatat
ctggctacaggaagccatactggaaaaattaatttatttggtgtagagagtggtaggaaa
gaaagtgccttggacaccagggggaaattcacattaagtattgcatatagtccagatggt
aaatacatagccagtggggccatagatggtattgtaaatatatttgatatacacactgga
aaattacttcacacactggaaggtcatgctatgccaattagatcactgtgtttctcacca
gattcccaattactagcaacagcctcagatgatggacatattaaaatatatgatgtacaa
catgctaatttagcaggtaccctgtcaggacatggatcgtgggttttaagtgttaatttc
agtccagataacacacattttgtctccagttcatcagataaatcagtcaaaatatgggat
gctggtacaagacagtgcatagcaacattttatgatcattatgaccaggtttggcaagca
aagtacaacggtaacggatcaaagattgtatcagtttcagacgacagagcaatacatatt
tatgactgtccactgtag

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