Saccoglossus kowalevskii (acorn worm): 100373657
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Entry
100373657 CDS
T04123
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100373657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100373657
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100373657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100373657
NCBI-ProteinID:
XP_002733208
LinkDB
All DBs
Position
Un
AA seq
275 aa
AA seq
DB search
MAADFKTAQPVEYYRQFLKKDVRPDGRELGEIRSTIVNIGSISTAEGSALVKLGNTTVIC
GIKAELCTPTNDEPKKGFVVPNVDLPPLCSPRFRPGPPSEQAQVVSQFIADVLKDSKMVN
HEDLCIAEGKIVWVLYCDMMCLDYDGNVIDACIISLLAALRNVALPSIEVDEETAKPKLT
SSTSSTMTVQSLPVSTSFAIFDNSILIADPTNEEENLATGVVTVVTNECGELCALHKPGG
SSLSESQIQECVKRSFSRGDEIRKLLDETFNSLDR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggatttcaaaaccgcgcagcccgttgagtactataggcagtttttgaaaaaa
gatgttcgtccagatggaagagaacttggtgaaatcagaagcactatagtgaatataggt
tctatcagtacagcggagggatctgcacttgttaaactaggaaacacaactgttatatgc
ggcatcaaagcagaattatgtacaccaaccaatgatgaaccaaagaagggttttgtagtg
ccaaatgttgacttacctccactatgttcaccacgattccgtccaggaccgcccagtgag
caagcacaagttgtcagtcagtttattgcagatgtccttaaagattcaaagatggtgaat
catgaagatttgtgcattgctgagggaaagattgtatgggttctatattgtgatatgatg
tgcttagactatgatggtaacgtcattgatgcctgtatcatttcactattagcggcacta
cgcaatgttgcactgccctctatagaggtagatgaagagaccgctaagccgaaattaaca
tcctcaacttcatctacaatgacggttcaatcactgccagtgtcaacatcatttgctatc
tttgataattccattctcatagctgatccaacaaatgaagaagagaacctagcaacgggt
gttgttaccgtggtgacaaatgagtgtggtgaactctgtgctctgcacaaaccaggtggg
agctctttatctgaaagtcaaatacaagaatgtgtaaagagatcgttctcccgtggtgac
gagatcaggaagctattggatgaaacttttaatagtctggatagatag
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