KEGG   Saccoglossus kowalevskii (acorn worm): 100373891
Entry
100373891         CDS       T04123                                 
Name
(RefSeq) cullin-4B-like
  KO
K10609  cullin 4
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03420  Nucleotide excision repair
sko04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100373891
  09124 Replication and repair
   03420 Nucleotide excision repair
    100373891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sko04121]
    100373891
   03400 DNA repair and recombination proteins [BR:sko03400]
    100373891
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sko04147]
    100373891
Ubiquitin system [BR:sko04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     100373891
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100373891
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100373891
Exosome [BR:sko04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100373891
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 100373891
NCBI-ProteinID: XP_006823839
LinkDB
Position
Un
AA seq 808 aa
MPLTSTEKSPFIKTELETNLKKRRPDENNHHLQNSSKKFRDDSPNESSPMADSTQRRPNF
SALNPTNNGFTNRTSPLANTKPGSTKKLVIKNFRVKPELPENYQERTWGKLKEAVQAIHK
HTSIKYSLEELYQAVENMCSHKMSASLYDKLKIVCEEHVKAQISLFIGDSTDSVSYLKIL
NNCWLDHCRQMIMIRSIFLFLDRTYVLQNSLISSLWDMGLELFRQHIISHRIVEARTVDG
LLLLIDRERNGEVVDHSLLKSLLRMLSDLQIYEEAFECKFLDATDKLYAAEGQRLMQERD
VPEYLAHCDRRLEEESQRILHYLDHSTKKSLIACVEKQLLEVHVNSIIQKGLDVLIDENR
TKDLALMCNLFQRTKSGLQELCMNFGIYIKKTGTSIVINPEKDKTMVQELLDFKDKMDYI
LNHCFAKNDKFVNIVKEAFETFINKRVNKPAELVAKYVDNIMRAGNKEATEEELEKMLDK
VMVIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQKCGGGFTSKLEGMF
KDMELSKDIMVAFKQSIQYQQNPGNIELTVNILTMGYWPTYTPMEVHLPTEMVQFQEVFK
KFYLSKHSGRKLQWQPNLGHCVLKACFKASVIFTTLCAFTALQPVIHFHNTACLYYDKLF
IKDYYHXTEDGELRRTLQSLACGKARVIAKTPKGKEVDDGDIFTFNEDFKHKLFRIKINQ
IQMKETAEEQSNTQERVFQDRQYQIDAAIVRIMKMRKTLSHTLLVSELYNQLKFPVKPAD
LKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgcctctgacaagtacagagaagagcccgttcataaaaacggaactggagacaaatctc
aaaaagcgcagaccggacgaaaacaatcatcatctccagaactcgagtaagaaatttcgt
gacgattcacctaatgaaagctctcccatggctgactctacacaaagaaggcccaatttt
tcagcgttgaatccaacaaataatgggtttacaaacaggacatcacccttggcaaatacc
aagcctggatccaccaaaaaactagtaatcaagaactttagagtaaaaccagagttacca
gagaactatcaggaaaggacatggggaaaactaaaagaagctgtacaagctatccacaag
cacacatctatcaaatacagtttagaagaactttatcaagctgttgaaaatatgtgttca
cataagatgtcagcatcattatatgacaaattaaaaattgtgtgtgaagaacatgtaaag
gcacaaatttcactgttcataggtgattcaacagatagtgtctcttatctgaaaatatta
aataattgttggcttgaccactgcaggcaaatgataatgatacgtagtatatttttattt
ctggaccgtacatacgtgctgcagaattcattaatatcatcattatgggacatgggtctg
gagttatttcgtcagcatattatcagtcacagaattgttgaagcaagaacagtggatgga
ttactgttattgatagatcgggaacgaaatggtgaagttgtggatcatagtctattgaaa
agtttattacgaatgttgtcagatttgcagatctatgaagaagcctttgagtgtaaattc
cttgatgcaacagataaactatatgcagcagagggtcaacgactaatgcaagaaagagat
gtaccagaataccttgcccattgtgacaggagattagaagaagaatcacagagaatatta
cattacttagatcactctacaaagaaatcattaattgcttgtgtagaaaagcaactactt
gaagtccatgttaacagtatcattcagaaaggattagatgttcttattgatgagaatcga
acaaaagacttggccttgatgtgcaacttatttcaaagaacaaaatctggtcttcaagaa
ctctgtatgaattttggaatatacattaagaaaactggtacatctatagtaataaatcca
gagaaagataagacaatggtacaagaactgctagacttcaaggataaaatggattatatt
ctcaaccattgttttgctaagaatgataaatttgttaatatagtaaaagaagcatttgag
acattcatcaataaaagagtgaataaaccagcagagcttgtagctaagtatgttgataat
ataatgagagctggaaataaagaagctactgaggaagaattagaaaaaatgttggataaa
gtgatggtaatattcaggtttatacacggcaaagatgtctttgaagcgttttataaaaag
gacttggcaaaaaggttattagttggaaagagtgcttcagtggatgcagaaaaatctatg
ttatcaaagcttaaacaaaaatgtggtggtggttttacgagtaaactggaaggaatgttt
aaagacatggaattatcaaaagatattatggtagcattcaaacagagcatacaataccag
caaaacccaggcaatatagaattaacagttaacattctaacaatgggttattggccaaca
tatacaccaatggaagttcatctcccaactgagatggtgcaatttcaagaagtatttaaa
aaattttacctcagtaagcacagtgggcgtaaattacagtggcagccaaatcttgggcat
tgtgtattgaaagcttgttttaaagcatcagtcatttttactacactatgtgccttcact
gcactacaaccagtcattcattttcacaacaccgcctgcctatactatgataagttgttt
atcaaagattattatcattgaacagaggatggtgaactgagaagaacattacagtcatta
gcttgtggtaaggctagagttatagccaagacaccaaagggcaaagaagttgatgatggc
gacatatttacatttaatgaagactttaaacataaattatttagaattaaaatcaatcaa
atacagatgaaagaaacagctgaagaacaatctaatacgcaagagagagtgtttcaagat
agacagtaccagattgatgctgccatagtgcgtatcatgaaaatgaggaaaactttgagt
catacattgttagtatcagaactttataaccaacttaaatttccagttaagccggcagat
ttgaagaaacgtattgaaagtttaatagatagagactacatggaacgtgataaagacaat
ccaaaccaatatcattatgtggcatag

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