Saccoglossus kowalevskii (acorn worm): 100374123
Help
Entry
100374123 CDS
T04123
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100374123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100374123
03041 Spliceosome [BR:
sko03041
]
100374123
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100374123
Spliceosome [BR:
sko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100374123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DREPP
RWD
Motif
Other DBs
NCBI-GeneID:
100374123
NCBI-ProteinID:
XP_006818091
LinkDB
All DBs
Position
Un
AA seq
675 aa
AA seq
DB search
MSSSTSLSQKKTRRRTTRPLSDVSVSSKDPKKVKLSSYDKEFVYSEEREVDQRDPVKDQA
IFSAASNDIKKLMKEIYDMKMKGVKDNTGEMTARRIQSSLNFVTLKKLNRIAHIRSKKSK
DSTHESKQKVDSFHLQLQNLLYEAMHLQKEVTKCLEFTSMDEDIDLVDVSDFYEKAPGEI
SKPEKTNRDPHQLRLARLDWELEQRKRLAEKCKELETSKNIISKEIQTKRDYLDSLQPKL
NDVLQATVPLQMLSMPFEAIRLQHKTARHLTRPLYILYVQANAYHEACDADLTVSIVGDI
DTTLQDDGNSSAVEDDSDSDDEAITESKRRRRKTVDLLTEKRKRVLRKHPLAVVLKIKCE
DGSVLSLCFSYLSVLQIVTVGVQLTPAMDSVITTFSAGDLLSPNSLLSCLFPGDYGNDTP
NPANHFQLSKLGMDTFGAYITEVGHPYKWVQRICGLEFLENSKELRDPKAKSSVSSSHIE
TITKALRNNRHSIPVPSDCQSLFPAKLEGKFTGWKSLTYDDYMTLLYTQDTLEAELVNET
DIMFLAVFERGSAKLNAAIAVHPNYPSTPPLFRVNISWRGVHHAVNDHSIRMMENEVNVH
FDEFSEHGAYDYLLTNQLQRLMMCFDVYLEAESAFGTSAAPVEFAKEKVMPRLSRGPHRA
KPFKYNPQHGFFSHR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagtacatcactttcacagaaaaaaacacgccgtagaacaacacgtccatta
agcgatgtatctgtcagttcgaaagatcccaagaaagtaaaattatcgtcctatgataag
gaatttgtatacagtgaagaaagagaagttgatcagagagatccagtaaaagaccaagca
atattttcagctgcttcaaatgatatcaagaaattaatgaaagaaatttatgatatgaag
atgaaaggtgttaaagataatactggcgagatgacggcaagacgaatccaatcatcttta
aattttgtgactcttaagaaattaaatcgcattgcacacatacgaagtaagaagtcaaaa
gattccacacatgaatccaaacagaaagtggacagtttccatctacagttgcagaatttg
ttgtatgaagcgatgcatctacagaaagaagttacaaagtgtttggaatttacttctatg
gatgaagatatagatcttgttgatgtgtcagacttctatgaaaaggcaccgggagaaata
tctaaacctgaaaaaacaaaccgagatcctcatcagttgagattagccagattagattgg
gaacttgaacagagaaaaaggttggctgagaaatgcaaagaacttgaaaccagtaagaat
ataatatctaaagagatacagacaaaaagagattatttggatagtttacaacctaaactg
aatgatgtacttcaggctacagttcccttacaaatgttgtctatgccatttgaagcaatc
aggttacagcacaagactgccaggcatttaacaagaccactatacatattatatgtccaa
gctaatgcttatcatgaggcgtgtgatgctgatttgacagtgagtattgtaggtgatata
gatacaacattacaagatgacggcaatagtagtgctgtggaagatgacagtgattcagat
gatgaggcaattactgaatcaaaaagaaggcggcgtaaaactgttgacctcttaacagag
aagcgaaaaagagttcttagaaagcatcccttagcagttgtattaaagatcaaatgtgaa
gatggatcagttcttagtttgtgttttagttacttatcagttttacaaatagttacagtg
ggtgtgcaattgacacccgctatggactctgtaatcaccacatttagtgcaggagactta
ctgtctccaaacagcttgttgtcttgtcttttccctggtgactatggtaacgacactccc
aatccagccaatcatttccagttgagcaagcttggaatggatacatttggtgcatacatc
acagaagttggtcatccctacaaatgggtacaaaggatatgtggtcttgaatttttagag
aatagtaaggagttaagagaccctaaagccaagtcgtctgtcagttctagtcacatagaa
actattactaaggcactacgaaacaatcgtcatagcattcctgtaccaagtgattgtcag
agtttattcccagctaaattggaaggcaagttcacaggttggaagtccttgacatacgat
gattacatgacactgttgtacactcaagacacattggaagctgagttagtgaatgaaaca
gacattatgtttcttgcagtgtttgagagagggtctgctaaactaaatgcagctatagca
gtgcatcccaattatccatccacgcctcctctgtttagagttaatatatcctggagaggt
gtgcatcatgctgttaatgatcacagtatccggatgatggagaatgaagtcaacgttcat
tttgatgagttcagtgaacatggagcatatgattatttattgaccaatcagctgcagcgt
ttgatgatgtgtttcgatgtgtatttggaagcagaatcagcttttggcacctcagctgca
ccagtagaatttgcgaaagagaaggtgatgccgagactgtctaggggaccgcatcgtgcc
aagccattcaaatacaacccacagcatggattcttcagtcacagatga
DBGET
integrated database retrieval system