Saccoglossus kowalevskii (acorn worm): 100374275
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Entry
100374275 CDS
T04123
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03020
RNA polymerase
sko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100374275
09124 Replication and repair
03420 Nucleotide excision repair
100374275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100374275
03400 DNA repair and recombination proteins [BR:
sko03400
]
100374275
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100374275
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100374275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
100374275
NCBI-ProteinID:
XP_006818068
LinkDB
All DBs
Position
Un
AA seq
102 aa
AA seq
DB search
MDKIVITKDTKVPNAAMFTVNKEDHTLGNLLRSQLLKDPQVLFAGYKVPHPLEFKFVLRV
QTTPDYSPQEAFTNAITDLISEVSLLEERFKVAVREKKEGLE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaattgttatcacaaaagacacaaaggtgcctaatgctgccatgtttacagtg
aacaaagaagaccacacactgggaaatcttttaagaagtcagctgctaaaagatccacaa
gtcttattcgctggttacaaagtaccacatccgttagagtttaaatttgttttacgagta
cagactacaccagattacagtccacaagaggcatttactaacgctattacagatctcatc
agtgaagtgtcgcttttagaagaaagatttaaggttgctgtcagagagaaaaaagaaggg
ctggaataa
DBGET
integrated database retrieval system
