Saccoglossus kowalevskii (acorn worm): 100374488
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Entry
100374488 CDS
T04123
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sko04131
]
100374488
Membrane trafficking [BR:
sko04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100374488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
RGS-like
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100374488
NCBI-ProteinID:
XP_006821606
LinkDB
All DBs
Position
Un
AA seq
1505 aa
AA seq
DB search
MDVSAGSSRLAGLSDDAGERRQSQPNIKYSPPQQHPSHLVAVSPDYENQTRKSDPYGQLI
QRCVIVQRDEKGYGLTVSGDNPVFVQSVKENGAAYKAGVQQGDRIIKVNGTLVTQSNHIE
VVKLIKSGSYVALTLLGRPPGSNYPPLPPPHVPAPPAPYTGRPEVTGPQPAVPEKDEELR
QERINVMRQMLDQEMELFQTTKDEYDRNPSDKIKRQLDGGTTRIKALEQQLRNLTGDSMS
SKDDEAPYFGQPPAMEGGFETITEQQGNASEQLLSEVDYYEPASPEESKAVDNDSLDGVP
DVLRENQIQAHSSADEDDEPIPFGIGPTEARESKAQQSASDGEVWVKNTIKYNPAPWLKD
GPDHKRHKSDPERCCQVQSDLPGSGTKIKRNLSDAADKESKRHAMSSGNSDPSVNTDAIT
AVDFAVRRHSASSDKVARDSDSDHEVSSEAVSPVKQHHYEEVLLQDTIDTSPSNEDAQMD
HAENPNLVTSPVELPLSPSEEIQSPTSPQSTEVVLQRADVNNVDSYMDTAVTTIPPSSTN
QQIVSMEDDEFESDNEQVIDHGPFISLDKLEKKPAHIAVLLHYLISNSDPSSMFFYIVTD
GYSNGSPKEMRKWAYEIYSTFLADQAVTFESMVPNDVLESIGIVLANKIDNSDAMRSIFV
LARAAAAVDIRYHLEDFRSKRALGLGTLYGDQQLSDLMDRNTEIQIVEQTLMPHLDRLSA
CDTFSNILWSGCEQNIHKGTCLSEVQHQCSGKRKKEKSKILPRIPRRTSENSSKASMYGQ
PPYSPTVKEALAKSQKDERQGFIQETHNSGMPWYQTSHVHVSPPNIHSLPEQEEDDLKML
KDSQKVGKLIKDLERGKGDSNQDLQSPGTPREGSPELMDSERQEKATVKRSGSLRTQEDT
RKRMGSGHEGSKRSKSDVDMDVAAVTNATSSLTNSSSSISAKSQDSSTLSEEYDSDMEAE
TDPPAWQTAVDRDLLKKLKPKEIKRQEVINELFHTEKSHVRNLKILDRVFMKPMQQEHLA
QKEFIQLLFPNLEDLLEMHISLNNAMKKERKTCHTIDEVGDILLARFDGEEGESLKEACA
IFCRHQSLALDLLKAKQKKDDKLARFLADAENNPNCRRLQLKDFIPCVFQRLTKYPMLLE
SILKYTSSSKTDHAKVSRARDCCKSILGYVNIAVRDAENQIRLQEMVKKTDKSPFEKSNN
TLITEFKNIDLNSRKLLHDGPLIWRLGRAKSIDLHVLLLEDILVLLQKDDNRFVLKCHSS
TVQTVKEEVKNTHSPIVKLTNLLCRNVATDKKAFFLVSTSPMGPQIYELVAGTNNERKVW
SEIITRTVDGMKNKDKRGTNITPVPSQLPPPPPYSELNEAVEEKLKTKSRSETEKINEKN
KSDSLDRLDNILEIQNPPELIDPAKVVVVNHPSMDDKTETVMPPREKLKQVDETIQKALV
EKSQIIAELLGAPLTPTTVDQETNPVQEYEPKDLVHAMMQQSNRLTTTVNEHMNLLSNTE
QSDSA
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcagctgggtcttcacggcttgctggtctctccgatgatgcgggggagaga
agacagtcgcagccgaacattaaatattctccaccacaacaacacccttcacatctcgtg
gcggtttcaccagactacgagaaccaaacaagaaaatcagatccttatggtcagttgata
cagaggtgtgtaatagtgcagagagatgagaaagggtatggtttgacagtgagcggtgat
aatccagtatttgtacaaagtgtcaaagaaaatggagcagcttacaaagcaggtgtacag
cagggtgacagaataattaaggtaaacggtacattggtcacgcagtccaatcatatagaa
gttgtgaaacttattaaatctggttcatacgtagctttaacgttacttggaagacctcca
ggatctaactaccctcccctaccaccgccacatgttcctgctccacctgctccttataca
ggaagaccagaagtcaccggaccccagcctgctgtgccggaaaaagatgaggaattgagg
caggagcgcatcaatgttatgcggcaaatgttagaccaggaaatggaattatttcagaca
actaaagacgaatacgatagaaatccttcagataaaataaagcgacaactggacggtggt
acgacgcgaattaaagcacttgagcaacaattgcgaaatcttacaggtgattctatgtca
tcaaaggatgacgaagccccttactttgggcaaccacccgccatggagggcggattcgaa
actattacagaacaacaaggcaatgcatcagaacagcttctctcagaagtagattattat
gaacctgcttccccagaagaaagcaaggctgtggacaatgatagtctggatggagtgcca
gacgtactcagagagaatcaaatacaggcccatagttcggccgatgaagacgatgaaccg
ataccttttggtatcggtcctactgaagcaagggaaagtaaagcacagcaatcagcgagt
gacggtgaagtgtgggtgaaaaatacaattaaatacaatccagcaccatggctgaaagac
gggccagaccacaaaaggcacaaatctgatcccgagagatgctgccaagtccagtcagat
ttgccaggttcaggaacaaaaattaaaaggaatctctctgatgcagcggacaaagaatct
aaaagacatgccatgtcatcaggaaacagcgatcccagtgtgaacactgatgcaatcaca
gcagttgattttgcagtcagaagacactcggcgtcttcagacaaggtagcacgagacagc
gacagcgaccatgaggtctccagcgaggctgtatcaccggtgaaacaacaccattatgaa
gaggttttgttgcaagatactattgatactagtccgtcaaatgaagatgcacagatggat
catgcggagaatcctaaccttgtaacaagtccagtagaactaccgctatccccatctgag
gaaatccagtctccaacatccccgcaatcaacagaggttgttttacaaagggccgatgtg
aataatgttgattcctacatggatacggcggtgacgacaataccaccgtcgtcaaccaat
caacagatagtatccatggaggatgatgagtttgaatctgataatgagcaagttatagac
cacggtcctttcataagtctagataagttggagaagaagcctgcacatattgctgtgctt
ttgcattatcttatatccaacagtgatccttcaagcatgtttttctatattgtaacggat
ggctacagcaatggtagccctaaagaaatgaggaaatgggcttacgagatctattcaact
ttcctggctgatcaagctgtaacctttgagagtatggtgcccaatgatgtgttagaatca
ataggcattgtgctggccaacaaaatagataactctgatgccatgcgaagtatctttgta
ttagcaagagctgcagctgctgttgatatcaggtaccatttggaagattttcgttccaag
cgagcacttggtcttggtacgctttacggtgatcagcagctttcggatttgatggacaga
aatactgaaattcagattgttgagcagactctcatgcctcatcttgaccgactttctgcc
tgtgataccttttcaaacatactgtggtcaggttgtgaacagaatattcacaaaggtacc
tgtctttcagaagtacagcaccaatgctctgggaaaaggaaaaaagagaagagtaaaatt
ctgccaaggataccacgacgtacaagtgaaaacagtagcaaagctagtatgtatggccaa
cctccatatagtccaacagtcaaagaagcactggccaaatctcagaaggatgagagacag
ggatttatacaagagacgcataattctggaatgccgtggtatcaaacatcacatgtgcat
gtttctcctcccaacatccattcattaccagaacaagaagaagatgatcttaaaatgctg
aaagacagtcaaaaagtagggaaattaattaaggatcttgaaagaggaaagggcgactcg
aatcaagatttacaaagtccaggaactccacgtgaaggaagtccagaactcatggatagt
gagaggcaagagaaagctactgtgaagagatcggggagcctcagaacacaggaggatacc
aggaagaggatggggagtggccacgagggctcaaaacggtcaaaaagcgatgtggatatg
gatgtggcagcagttacaaatgctactagttctctaacgaattcctcatcaagtatttct
gccaagagtcaagattcttcaacgctgtcagaggagtatgactctgatatggaagcagag
acagatccacctgcttggcagacggcagttgatcgagatctcttgaaaaaattgaaaccc
aaagaaatcaagaggcaagaagtcatcaatgagttattccacacagagaagtcacatgtg
cgaaatttgaaaatccttgatcgtgttttcatgaaaccaatgcagcaggagcacctggcg
caaaaagaatttatacaattactgtttccaaatttggaggatctacttgaaatgcacatc
tcattaaacaatgccatgaaaaaagagaggaaaacatgtcataccattgatgaggttggg
gacattttattggcaaggtttgatggtgaagaaggagaatcactaaaggaagcatgtgca
atcttttgcaggcatcaaagtcttgctttagatttgcttaaagcaaaacaaaaaaaagat
gacaaactagcaaggtttttagctgatgccgagaataatcccaactgcagacgactacag
ttaaaagattttattccctgtgtttttcaaagattaaccaaatatccaatgctactagaa
agtattttaaaatataccagttctagtaaaacggaccatgcaaaagtcagtagggcgcgt
gactgttgtaaatccattttaggctatgtgaatattgctgtgagagatgctgaaaaccaa
atcagattacaagaaatggtgaaaaagactgacaaaagtccttttgagaagtctaacaat
acactaattactgaattcaagaatattgatttaaattctcgaaaacttttacatgatgga
ccattgatttggaggttaggaagagccaaatcaatagatctgcatgttcttttactggag
gatatactggttctattacagaaagacgacaacagatttgtattaaaatgtcatagtagt
actgtacagactgtaaaagaggaagtgaaaaatacacatagtcctattgttaaattaact
aatttattgtgtagaaatgtggctacagataagaaagccttttttctggtgagtacatca
ccaatgggaccacaaatttatgaacttgtagcagggacaaacaacgaacgaaaagtctgg
tccgaaatcattacaagaacggtggatggtatgaagaataaagacaagagaggaaccaat
atcacacccgtgcccagtcaattgccgcctcccccaccatactctgaactgaacgaagca
gttgaagagaaattaaaaacaaaatcaaggagtgaaacagagaagatcaatgaaaaaaat
aaaagtgacagtctggatagattagacaacattttagaaatccaaaatcctcctgaacta
attgatccggccaaagtggttgttgttaaccaccccagtatggatgataaaactgaaact
gtcatgccaccacgtgaaaaacttaaacaagtggatgagacaattcaaaaagcattagtt
gagaagagtcaaatcattgctgagttgttaggagcgccactaacaccgacaacggtagat
caggagacaaacccagttcaggaatatgaaccaaaagatttagtacatgctatgatgcag
cagtcaaatcgtttaacgacaacagtgaatgaacacatgaatttattgtcaaatacagag
caaagtgattcagcctga
DBGET
integrated database retrieval system
