Saccoglossus kowalevskii (acorn worm): 100374512
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Entry
100374512 CDS
T04123
Symbol
PPP1CB
Name
(RefSeq) protein phosphatase 1, catalytic subunit, beta isozyme
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100374512 (PPP1CB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sko01009
]
100374512 (PPP1CB)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100374512 (PPP1CB)
03019 Messenger RNA biogenesis [BR:
sko03019
]
100374512 (PPP1CB)
03041 Spliceosome [BR:
sko03041
]
100374512 (PPP1CB)
Enzymes [BR:
sko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100374512 (PPP1CB)
Protein phosphatases and associated proteins [BR:
sko01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
100374512 (PPP1CB)
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100374512 (PPP1CB)
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100374512 (PPP1CB)
Spliceosome [BR:
sko03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100374512 (PPP1CB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
100374512
NCBI-ProteinID:
XP_002731251
LinkDB
All DBs
Position
Un
AA seq
325 aa
AA seq
DB search
MADTELNIDKVISTLLEVRGCKPGKTVQLTESEVRGLCLKAREIFLSQPILLELEAPLKI
CGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLESICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADIVSKFLNRHDL
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK
KAKYQYGGLNSGRPVTPPRGPMKKK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgagctgaacatcgataaagtgatttcgacgcttttagaggttaggggt
tgcaagcccggaaagacagtgcaattaacagaatcagaagtcagaggattgtgtctgaaa
gctcgtgaaatatttttaagtcaaccgatccttctcgagttggaagctcctttaaaaata
tgcggtgatattcatggacagtacacagatcttcttagactttttgaatatggtggtttc
ccaccagaagcaaactacctcttccttggagattatgtagatagaggcaaacagtcatta
gaaagtatctgccttctcttggcttacaaaataaaatatcctgagaatttcttcttgttg
agagggaaccatgaatgtgctagtatcaatcgaatttatggcttctatgatgaatgtaaa
aggcgttacacaattaaattgtggaaaactttcacagattgtttcaactgtttgcccata
gcagctatagtagatgaaaaaatcttctgttgtcatggaggtttatcaccagacctgcag
tcaatggaacagatacggcgtattatgaggcctacagatgtgccagatacagggttgctg
tgtgatcttttatggtcagatcctgacaaggatgtacagggatggggtgaaaacgatcgc
ggtgtgtctttcacatttggtgccgatattgtcagtaaattcctaaacaggcacgactta
gacttgatatgtagagcccatcaggttgtagaggatggttatgaattctttgccaaaaga
cagctggtcactctattctcagcacccaattactgtggtgaatttgataacgcaggtggc
atgatgagtgtagatgaaacacttatgtgctcattccagattcttaaaccatcagagaaa
aaagcgaaatatcagtatggcggtctcaattccggtcgtccagttactccaccgcgtggc
ccaatgaagaagaagtaa
DBGET
integrated database retrieval system
