KEGG   Saccoglossus kowalevskii (acorn worm): 100374582
Entry
100374582         CDS       T04123                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:sko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sko03041]
    100374582
Spliceosome [BR:sko03041]
 Complex B
  Other components
   Complex B specific factors
    100374582
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_CDC20-Fz LisH_TPL Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_NWD2_C Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_HPS5 Mala_s_1-like Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_SPT8 LisH_2 Beta-prop_BBS7 LisH_PAC1 LisH_WDR26 eIF2A FOP_dimer
Other DBs
NCBI-GeneID: 100374582
NCBI-ProteinID: XP_006819266
LinkDB
Position
Un
AA seq 472 aa
MAIEIESADVVRLIQQYLKENNLHRTLAVLQEETSISLNTVDSVDGFVSDINNGHWDTVL
QAIQSLKLPDKTLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKQQQPDRYVHLENL
LARSYFDPREAYPDGSSKERRRAAIAHALSGEVSVVPPSRLLALLGQALKWQQHQGLLPP
GTNIDLFRGKAAVKDEDEEKYPTQLSKTIKFGQKSHVECSAFSMDGQYLVTGSVDGFTEV
WNFTTGKIRKDLKYQAQDNFMLMDDAVLCVSFSRDSEMLATGGQDGKIKFRVHGLKSGKT
LKEFRGHTSFVNDAMFTPDGHFIISASSDGTVKVWNVKSTECTNTFKSLGGTSTADITVN
SVHPVPRNTEQFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCATISPRGEWIYCVG
EDLVLYCFSTNTGKLERTLNVHDKDVIGIVHHPHNNLIATYSEDGLLKLWKP
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggcgatcgaaatagagtcagctgatgttgtccgtcttattcaacaatacctgaaggaa
aacaatttacatcgcacattagcggtattacaagaagaaaccagtatatctttgaatact
gtggatagtgtagatggatttgtatccgacataaataatggtcattgggacactgtactc
caggctattcagtcactaaaacttccagataaaacacttatagatctctatgaacagatt
gtattagaacttattgaactgagagaactgggagcagcgcgttcattgctcagacaaaca
gatcctatgataatgttaaaacaacaacaaccagacagatatgtacaccttgaaaatctg
ctggcaaggtcgtattttgatcccagagaggcctaccctgatggaagcagtaaagaacga
aggcgagcagccattgcacatgccctgtctggtgaggttagtgtggtaccaccatcacgt
ctattagcgctgttgggacaggcattgaaatggcaacaacatcaaggtctcttgcctcct
ggtacaaatattgatttgtttcgtggtaaagcagctgttaaagatgaagatgaagaaaag
tacccaacacaactgagcaaaactatcaagtttggacaaaaatctcacgtggaatgttca
gcgttttcaatggatggtcagtatctagttaccggcagtgttgatggatttaccgaagtg
tggaattttacaaccggaaaaatcaggaaagatctcaagtaccaagcacaggataatttt
atgttgatggatgatgctgttctctgcgtatctttcagcagagacagtgaaatgctggcg
actggtggtcaggacggaaaaataaagttcagagtgcatggtttgaaatctgggaagacg
ttaaaggaattccgtggccacacatcatttgttaatgacgctatgttcacaccagatggg
catttcattatcagtgcttcatcggatggtactgtcaaagtgtggaatgtaaagagcaca
gaatgtacaaatactttcaaatcactgggaggaacatcaacggctgacatcactgtcaac
agtgtacatccagtacctcgaaacacagaacagtttgttgtctgtaatcggagtaacact
gttgttattatgaatatgcaaggccagattgttcgtagtttcagttctggtaaacgtgaa
ggtggcgactttgtatgtgctactatctcacctcgtggtgaatggatctactgtgtagga
gaagatctggtgctctactgcttctcaacaaacactggcaaattggaaagaaccctcaat
gttcatgacaaagatgttattggtattgtacatcatccacacaacaacctgattgcaaca
tacagtgaagatggtctactgaaactctggaagccttag

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