Saccoglossus kowalevskii (acorn worm): 100374640
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Entry
100374640 CDS
T04123
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100374640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100374640
03036 Chromosome and associated proteins [BR:
sko03036
]
100374640
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100374640
Coactivators
SAGA/TFTC/STAGA complex
100374640
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100374640
STAGA complex
100374640
TFTC complex
100374640
SAGA complex
100374640
SLIK complex
100374640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
CFAP251_N
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR75_1st
DSE1_N
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_EIPR1
PAC11
Beta-prop_IFT140_1st
Ge1_WD40
WD_LRWD1
Beta-prop_HPS5
eIF2A
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_SPT8
LisH_TPL
Beta-prop_WDR75_2nd
Beta-prop_Vps41
WD40_like
LisH_PAC1
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
100374640
NCBI-ProteinID:
XP_006821419
UniProt:
A0ABM0MN28
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MAESLADQSKDQHPVQQHVQRPHEERTPPHVTVETGKDVKKMDKQTLMAVLQFLKKNNLK
DTVDILKKETNFSVSDEEPTTATDQDVSSVLSAYTSEGDPSQYDDNYSNVLAFIESALDM
YKSPQHCFSSHAAVSFFAKHFGIQEEYHQEDLVKLSTVTKKEHMKSNELMINFRSSKFTI
KMSRDSYQLLKRYLNDKQQSVLLDLLQEHLYIDVFDGLPRNKQQIDATAGAMTGAARREA
NKTKVFYGLLKEPEINLPLEEEEEGAEGEDKPKKKKVKRDSHMGKKNKPDPNAPALSRIP
LPSLRDIDKMERVIAMRETLKRIKVSADNLPSICFYTFLNAYQNLTSAEISEDSSMMAAG
FADSLIRVWTLTPKKLRAVKPIHELMNIDKEADDVLERIMDERTATDNRVLLGHSGPVYA
TSFSPDRTMLLSASEDCTVRLWSLQMFVNLVCYRGHNYPVWDVQFSPYGYYFVSVGHDRT
ARLWATENHQPLRVFSGHLSDVDCVKFHPNSNYIATGSSDRTCRLWDVSSGNCVRILTGH
KAPIHSIAFSPDGKHLATAGVDKTVLLWDIGHGSLIGRLVGHTDTIYSLCFSRDGSTLAS
GGIDNCVKLWDVNKVFGEVDTDEITNTTHITLSENTNYLFGSYPSKSTPIHHLHFTRRNL
LLATGPFVI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcctagcagaccaatcgaaagatcaacatcctgttcaacaacatgtccag
cgtccacatgaagaaagaacacccccacatgttactgtggaaacgggcaaagacgtcaag
aaaatggacaaacagacgcttatggcggttttacagtttcttaagaagaacaacctgaaa
gacactgtagacatactgaaaaaagaaaccaattttagtgtatcagatgaagagccaaca
actgccacagaccaagatgtgtcatcagtgttgtcagcatatacaagtgaaggtgatccc
tcacagtatgatgataactacagtaatgtgttggcttttatagaatcagctttagatatg
tacaagtcacctcaacactgtttctcatctcatgcagcggtttcattttttgccaagcac
tttggtattcaagaagagtaccaccaagaagaccttgtgaagttatcaactgtcacaaag
aaagaacacatgaaaagcaatgaacttatgatcaatttcagatctagcaaatttacaatc
aagatgtcgagagattcatatcagctgttgaaaagatatttaaatgataaacaacaaagt
gtgctgttggatcttctccaggaacatctgtatattgacgtgtttgatggcttaccaaga
aacaaacaacagatagacgctactgccggtgcaatgacaggagcagctcggcgagaagcc
aataaaactaaagtattttatggattattgaaagaaccagaaatcaatttacctctggag
gaggaagaggaaggggctgaaggagaggataaaccaaagaaaaagaaagtgaagagagat
tctcacatgggcaaaaagaataaaccagatcctaatgcgccagcactgagcagaatacct
ctaccaagtttgcgtgacatagacaagatggagagagtgattgcgatgagagaaacactc
aaacgaattaaagtatcggcagataatctaccatctatttgcttctatacattcctcaat
gcttaccagaatttaacttcggcagagatatctgaagattccagcatgatggcagcaggt
tttgccgattcactgatacgagtgtggacattaactcccaagaaattaagagctgtgaaa
cccatacatgaactgatgaatattgacaaagaagcggatgatgtcttggaaagaattatg
gacgaaaggactgcaactgataaccgtgtattgttaggtcatagtggtcctgtttatgct
actagttttagtccagatagaacaatgttactttctgcttctgaagattgcacagtgcgt
ctttggagtttacagatgtttgtcaatttagtttgttatagagggcacaactaccctgtg
tgggatgtacagtttagtccatatggttattatttcgtatctgtgggtcatgacaggaca
gcccggttatgggcaaccgaaaatcaccagccattgcgcgtattttcaggacatctctct
gatgttgattgtgtgaaattccatcctaattccaactatatagctacaggttctagtgat
aggacatgtagactatgggatgtaagtagtggtaactgtgtaaggatacttactggccat
aaggctcccatccacagtatagctttctcaccagatggtaaacatcttgcaacagctggt
gttgataagacagtactattatgggatatcgggcatgggagtctaattggtcgcttagta
ggacacacagacacgatatactctctctgtttcagcagagatggcagtacacttgcttca
ggtggtattgataactgtgtgaaattatgggatgtcaataaggtatttggagaagttgat
acagatgaaatcacaaatactacacatataacactatctgagaacacaaactatttattt
ggctcctatcctagtaagagtacaccaattcaccacctgcatttcacacgcaggaatcta
ttactggcaactggaccttttgtcatttga
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