Saccoglossus kowalevskii (acorn worm): 100374995
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Entry
100374995 CDS
T04123
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100374995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100374995
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100374995
mRNA degradation factors
5'-3' decay
Decapping complex
100374995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
Acetyltransf_18
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
WD40_CDC20-Fz
Acetyltransf_1
Beta-prop_TEP1_2nd
Acetyltransf_7
Motif
Other DBs
NCBI-GeneID:
100374995
NCBI-ProteinID:
XP_006822030
LinkDB
All DBs
Position
Un
AA seq
1698 aa
AA seq
DB search
MDSSPSSSLSATEATQVLKDILNVGKALDLSSDSSLSKTGSVDISQGTVGEMSGSSNSAS
VNGTSSSQQLHLSGGGDSGFSLMGSGIRSAGEIVSRQQILLEGDDATGSIPIYAREVNIA
ASQASSVTNTTAGSNKVKISPVTNYDWEQKYYTGNLVAVNHTYIAYALKGRTGYVVRVIN
SQTSERVLLKGFVGIVVDLSFAHITSNTLACIDEQGNLFVWDLYETDGKILYQARLLVMR
PTDTAPSKHHRLIWCPYMPEDISESGSTAASNIDEGGKMLAITHDEKAEVWDLDIVVENH
GNGATVQVGDVKDGVSRVNGHSQPITQAALSPDAAVLATASFDGMVKFWQIYQENSDPPR
RLHQWTPHEGRPVSCLLFCDNHKHQDPNLPFWRFLLTGADFNREIKVWCTVSWTCLQTIR
NLTPSSDEPEPCLRAALDLSASYLIMSDINRKVLYVFEVYQDIEKGHAHISSVCEFLLTQ
PMLSFAILDANRKKFKHITTADGDVEDESGDIDRSIEKDGCHSNIAVLIKMYCVHTKSLQ
QLHIRFQPQSSILSPHDQVAGSVSTVSQDEIGVRDQLSDLSMTDIEGSMSDNQGAADNDD
ELEGDQAPTPTPGSSFTASFTSADSLRSPHQQPVLLPPGAFTSTTPKQSPSQSLRDSHST
TSSLTAVSGINNSADLLSPCDSQALSDSTITLTPTTHRFTPESNRVLTPTQMPLPPITPG
EQEIDLAELEKSALEIELGEPPLATSETVKPQTLQKVDSSSSIEIVSNGAELEDASPDIE
IVPEPGQDDPSVEPLLDISSGSSQNVLPIEESLKVGEEEEGMPENKMRHSEEEAPDKVPP
SSANAAAVAETYRTDEMNATSTEGSIKDNDREVIPQRLDVTVQDIKGDTSDHESLEAASL
SSSSSTPGKDKAFKKDFRKERKARSSPRPKKSIPVLSEETSSELSSGIQQLLAMLKTQEQ
EIKQLRQEVQKHQLNNTVVQSLKSKMDKIEKHIGNKIDTVMAHQSQEEKQRLDAALHERQ
SMDKQKQEKLLETVSQTLSTTITQKLEKTVRAEMKNCVLPAVNRVVDPLKDQLHQTVAQK
LTATDALMKENIGKLVRARSTTEAIGQAAANTVQNAMHSTYRETFQSHIVPAFEKSCQNI
FHQINDTFQTGTQEYIKQLERHLQNKSQQTQAENEATLAKMQTMFDAFQASSAEIKKNVV
SGVQEELDKQLKKSMTSLQGMLVNKVREVVKQEVSHAMKEQQAVVETSIVNAVRSQAATP
VSSQANIQQLQIQIVQLLHQGQLNSAFQLALSASDLHLVVYICQSVSAVQVFQESPCPLE
QPVILSLIQQLSAELESDTELKQKYLQEAVMNLDSTHPIAREHMPAVLMSLVQKIDLFVQ
NNTQNEMARPLRMVSMAARSLLKNDVTIRPVKEKDLKFISDITIAEHWNYPVYYLETLRQ
ISPDGFLVAENREGQIVGCGMVTNLSDTISYFGLGLTVREHRKQGIHKDLLRARFQYAGD
RNYALSSADQHRCDVFVDVGFRQIDNNFLVKCFMGSVDHSIVSITSSKSIDIVPYDKVTF
NSLVQYDSLVSPFPRPDNLKIWCSRAKSVLVARKLNSNEVVGYGVIHTLLPGEFTILPLY
ANDEDIAHMLFNELVMSLPNYSKTRMHILVNNKTGVEIAKKYKLDEELYTLHRQYTKHVI
PLPIDNVISAGSPEMSLI
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggactcctctcccagttcgtctctgagcgcaaccgaagcaacgcaagtcctgaaagac
atcttgaatgtggggaaggccctcgatctatcttcagattccagcctgagtaaaactggt
agtgttgatataagccaaggaacagtaggtgaaatgtctgggtcatcaaacagtgcgtct
gtgaatggaacatcatcatctcaacagttacatttgagtggaggaggagattctggcttc
tcgttaatgggttccggtattagaagcgctggtgaaatagtatccagacaacaaatttta
ttagaaggggatgatgccacaggtagtataccaatatacgcaagggaagtcaatatagca
gcgagtcaagcgtcatcagttactaatactacggccggcagtaataaagtcaaaatttca
ccggttacaaactatgactgggaacaaaaatactatactggcaatttagtagcagtcaac
cacacgtacattgcatatgcattgaaaggtcgtaccggctatgttgttcgagttatcaat
tcccaaacttcagagagagtacttctgaagggttttgttggtatagtggttgatttatca
ttcgctcacatcacatcgaatacattagcatgcatcgatgagcaaggaaatctatttgtg
tgggatctttatgaaactgatggtaaaatactttaccaggcacgcttgcttgtgatgaga
cccacagataccgctcccagtaagcatcacagactgatatggtgtccgtacatgccagaa
gatatcagcgaatcaggctctactgctgcatctaatatagatgaaggtggcaagatgtta
gcaatcactcatgatgaaaaagctgaagtatgggatcttgatattgttgttgaaaaccat
ggtaacggtgcaactgtgcaggttggtgatgtgaaagatggtgtcagcagagtcaatgga
cattcacagccaataacccaggcagcactatctccagatgctgccgtgttagccactgcc
agttttgatggcatggtgaaattctggcagatataccaagagaactctgatccaccaaga
agactacatcagtggactccgcatgaaggcagacctgtatcgtgtttactcttctgtgat
aatcataaacaccaagatccaaatttaccattttggagattccttctcaccggtgctgac
ttcaatagagaaatcaaagtgtggtgtactgtatcatggacctgtctgcagacaatcaga
aatctgacaccaagttctgatgagcctgaaccatgtctcagagcagcattggatttgtca
gcttcttatcttataatgtctgatatcaatagaaaggttttgtatgtgtttgaagtatac
caagatatagagaaaggccacgcccacatttcatcagtctgcgagttcttactgacacag
ccaatgttgagttttgctattttggatgcaaatagaaaaaaattcaagcatatcacaaca
gcagatggagatgtggaggatgagagtggtgatattgataggtctattgagaaagatggt
tgtcatagcaacatagctgtactcatcaaaatgtactgtgtgcataccaaatcattacag
caactacacattcgtttccaacctcagtcatctatactgtcccctcatgatcaggttgct
ggttctgtaagtacagtctcacaggatgaaataggtgtacgtgatcagctatctgatctg
agtatgactgacattgaaggatccatgtcagacaatcaaggtgcagccgacaatgacgat
gaacttgaaggtgatcaagcaccaaccccaacaccaggtagttcattcaccgcttcattt
acatcagccgattctctcagatcaccacatcagcaaccagtcttgcttccaccaggagca
ttcaccagtactacaccgaaacaatctccatcgcagtctctgcgagatagccattctaca
actagtagcctgacagccgtgtccggtattaataattctgctgatctcctgtcaccgtgt
gactcccaagctttgtctgatagcacaataaccttaacaccaaccacccacagatttaca
cctgaatctaacagagttctaaccccaacacaaatgccactcccacctatcaccccaggg
gagcaggaaattgacttagcagagcttgaaaaatctgctttggaaattgaacttggggaa
ccaccacttgcaacatcagaaactgttaaaccacaaactttgcaaaaagtggattccagt
tcaagcattgagattgtcagcaatggggctgaactagaagatgcttctccagacattgaa
atagtccctgaacctgggcaggatgatccaagtgttgagccactgttggacatctctagc
ggtagttcccaaaatgtcctgccaattgaggagtctttaaaagtcggtgaggaggaggag
ggtatgccagagaataaaatgcgacacagtgaagaggaagccccagataaagtaccacca
tcaagtgcaaacgctgcagcagtggcagaaacttatagaacagatgaaatgaatgcaact
tccactgaaggtagtataaaagacaatgatagagaagtcataccacagaggttggatgtc
actgtacaagacattaaaggagatacaagtgatcatgaatcattggaggctgcgtcattg
tcttcatcatccagtactcctggtaaagataaagctttcaaaaaagatttcagaaaagaa
aggaaggccagaagctcaccaagaccaaagaaatccattcctgttttatctgaagagacc
tcctcagagttatcatcgggtattcaacagctgttggcgatgttgaagactcaggagcag
gaaattaagcaactgcgtcaagaggtgcaaaaacatcagttgaacaataccgtggtacag
agcttaaaaagtaaaatggataaaatagagaagcacattgggaataaaatagatacagta
atggctcaccagtcacaggaagaaaaacagagactagatgcagcgttgcatgaaagacag
tcaatggacaaacagaaacaagagaaactactagaaacagtatcacaaacactgagtaca
actataacacagaaattagaaaaaacagtcagagctgagatgaagaactgtgtacttcca
gctgtgaatcgagtggtggatccattgaaagatcaacttcatcagacagtagcacaaaaa
ttaacagcaacagatgcactcatgaaggaaaatattggaaaattagtgagagcacggtcg
accacagaagccattggtcaagccgctgccaatacagtccagaatgcaatgcattctacg
tacagggaaacgttccaatctcatattgttcctgcttttgagaaatcttgccagaatata
tttcatcaaataaatgacactttccaaacaggaacccaagaatatattaagcaactagaa
agacatctgcagaacaaaagccaacaaactcaggctgagaatgaggctacacttgcaaag
atgcagaccatgtttgatgcattccaggccagctctgctgaaattaaaaaaaatgttgtc
agtggtgtgcaagaagaacttgataaacagctcaaaaaatctatgacaagtcttcaaggc
atgctggtaaacaaagtacgtgaagtggttaaacaagaagtaagccatgctatgaaagaa
cagcaagctgttgttgagacaagtatagtcaatgctgtgcggtctcaagcagccacaccc
gtgtcatcacaagcgaatatccaacaactacagattcagatcgtgcagttgctccaccaa
ggacagctgaactcagcctttcaattagctttatcagcatcggatctccatcttgttgtg
tacatctgtcagtcagtgtcagcggttcaggtgtttcaggagtctccttgtcctctcgaa
cagccggttattctatcattgatacagcagttatcggcagagttagaaagtgacacagaa
cttaaacaaaaatatttgcaagaagctgtgatgaatctagactccacccatcctatcgcc
agagaacacatgcctgcagtcttaatgtcacttgtacagaaaatagatctgtttgtccag
aacaatacacaaaatgaaatggcacgacctcttcgtatggtctccatggccgcaaggtct
ctcctgaaaaatgatgtcacaattcgccctgtcaaagaaaaagatttgaagttcataagt
gatataaccatcgctgaacactggaattatcctgtatattaccttgaaacactccgtcaa
ataagtcctgatggatttttagttgccgagaatcgagaaggccaaattgtcggttgcggg
atggtcactaacctttcagacacgatctcttactttggactgggtctgactgtgagagaa
cacagaaaacaaggaattcacaaagatttgttgagggcacgttttcagtatgcaggggat
cgtaattacgcattgtcttccgccgatcagcatcgttgtgatgtatttgtagacgtggga
ttcaggcaaatagataataattttctggtaaaatgtttcatgggaagcgttgatcattct
attgtatctatcactagttctaagtccatcgatattgttccttacgacaaggtaacattc
aattctttagttcaatatgatagtttggtgtcaccttttccaagaccagataatttaaaa
atttggtgcagtagggcaaaatcggtcttagtcgcacgaaaattgaattcaaatgaagtt
gtaggctatggtgttattcacacattattgccaggtgaatttacgatattgcctttatat
gcaaatgatgaagacatagcccatatgttattcaatgaattagtgatgtccttaccgaat
tattcaaaaaccagaatgcatattcttgtcaacaataaaacaggtgtagaaatagcaaaa
aagtataaacttgacgaggagctatacacattgcatcgccaatataccaagcatgtcata
ccattgccaattgataatgttatatcagctggctctcctgaaatgtcacttatctag
DBGET
integrated database retrieval system
