Saccoglossus kowalevskii (acorn worm): 100375135
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Entry
100375135 CDS
T04123
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100375135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
100375135
Spliceosome [BR:
sko03041
]
Complex A
Other components
Complex A specific factors
100375135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
DUF7573
Ribosomal_L2_C
Prok-RING_1
Zn_ribbon_RPAB4
Rhodanese_C
DnaJ_CXXCXGXG
DZR
Motif
Other DBs
NCBI-GeneID:
100375135
NCBI-ProteinID:
XP_002736771
UniProt:
A0ABM0GT33
LinkDB
All DBs
Position
Un
AA seq
704 aa
AA seq
DB search
MNFGNMPSMSATGANSVPLGKPNPAISSGGRMSNESMLNAAREAAMRIAEKRRGFSASTS
AADHPLVGGAGPTKKKKRSRWEPQVSAETTPVASVSIVLPPNLTADQEKQFLLHLQIDEQ
SRRLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREYRTRKKIEEERHKLIQEALVLNP
EYKPPADYKPPVQRVSDRVTIPQDKHPDINFVGLLIGPRGNTLKKMEKETGAKIMIRGKG
SVKEGKIGRKDGQPLPGEDEPLHALVTANNAESVKKAVDQINEIIKQGIETPEGQNDLRR
MQLRELAKLNGTLREDDMIRCTNCGASSHRTWQCPERQNITNTVVCTQCGGTGHIAADCR
QKREGGGGFGPQSTVDKAKMDSEYMSLMAELGEGPPPPATSSAPPPQPASGPRPLLSTPV
NPPPPLVRNRSFTMGQNAHTPPWANKEKHQHHHQHQHHGRMDNKPPSLLGSSPNQQHPPS
LMSQQVQPLSSLPPPPPPASSGNQQWNQLPPAPPGSQAPPLPPPSLLFAPPPPPPTSEPP
PPPQSSSSQWQSQPSSAPMLVTTHSGAPPWHQHQIQGNAPPLMSTNFAPPWHQFSGTEVP
YGSSPTSNAMPPPPWQLQAAPPPPPWQQPPPPPVPQPPTMMPPGMPPPPASQPPLPPGPP
PPPPVPMMPYGQPPPPPPPMDSSPQGMGAVPPLLPPAPPPPPPN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaattttggcaatatgccgtcgatgtcagcaactggggccaatagcgtgccgcttggg
aaaccaaatcctgcaatttcctccggcggaagaatgtcgaacgagtccatgctgaatgca
gccagggaagcggctatgagaatagctgaaaaacgacgaggtttctctgcctcgacctct
gctgccgaccacccacttgtagggggagcaggacccacgaaaaagaagaaaaggagtcga
tgggaaccacaggtctctgcagaaacaacaccagttgcaagtgtttctattgttctgcca
ccaaatttaactgcagatcaagaaaaacagtttcttttgcacttgcaaatagacgagcaa
agtcgccgactgcggacaggtgatctgggtattccacctaatccagaggatagatcccct
tctccagaacctatttataacagcgaaggtaagcggttgaataccagagagtatcgtaca
cgtaaaaagattgaagaagagcgtcataaactgatccaagaggcgcttgtgttaaaccca
gaatacaagccacctgctgattataaacctcctgttcagagggttagtgacagggtaaca
atacctcaagataagcatccagacattaattttgtcggccttctaataggccctagagga
aacactttaaaaaaaatggaaaaagaaacaggggccaaaatcatgattcgtggaaaaggt
tctgtgaaggaaggcaagattggacgcaaggatggacaaccattgcccggagaggatgaa
ccattacatgccttagtgactgcgaataatgctgaaagtgtcaagaaggcagtcgatcag
atcaatgaaattatcaaacagggaatagagacgcctgaaggccagaatgatctgcgccgc
atgcaactacgggaacttgccaaactgaacggcactctgcgagaggacgacatgataagg
tgcaccaattgtggagcaagtagtcatcgtacatggcaatgtcctgaaagacaaaatatt
accaatactgttgtgtgtacgcagtgtggaggaactggtcatattgcagctgattgtcga
cagaaacgagaaggtggaggtggttttgggccacagagtactgtagacaaagctaaaatg
gacagcgagtatatgtcgctgatggctgagttgggtgaaggaccaccacctcccgctaca
tcatctgcacctccacctcaaccagcatctggacccagaccactcttatcaacaccagtc
aatccaccaccaccattggtaaggaatcgttcattcaccatgggtcagaatgctcataca
ccaccgtgggcaaacaaagagaaacaccaacatcatcaccagcaccagcaccatgggagg
atggataacaaaccacccagcttgcttggatcttcaccaaaccaacaacatcctccaagt
ctaatgtcacagcaagtccagcccctctcgtctttacctccaccacctccaccagctagt
agtggcaaccagcagtggaatcagcttccgccagcaccgccaggctctcaagctcctcca
ttaccacctccatctttgctgtttgcgccgcccccaccacccccaacaagtgaaccaccg
ccaccaccacaatcgtcaagttcacagtggcaatcccaaccaagcagtgctcctatgttg
gttacaacacattctggagcaccgccatggcatcaacatcaaatacaaggtaatgccccg
ccattgatgtctacaaattttgcaccaccatggcatcagttctcaggtacagaggttcca
tatggttcttcaccaacatcaaatgcaatgcctccaccaccgtggcaattacaggcagcc
ccaccaccaccaccatggcagcaaccacccccaccacctgtcccacaacctcctacaatg
atgcctccagggatgccaccaccaccagcgtcacaaccacctcttcccccaggaccacca
ccaccacccccagtacctatgatgccatatgggcaacctcctcccccacctcctcctatg
gattcatcaccacagggtatgggtgctgttccaccactcctaccccctgctccaccacca
cccccaccaaactaa
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