Saccoglossus kowalevskii (acorn worm): 100375150
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Entry
100375150 CDS
T04123
Symbol
SUPT5H
Name
(RefSeq) suppressor of Ty 5 homolog (S. cerevisiae)
KO
K15172
transcription elongation factor SPT5
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100375150 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100375150 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
sko03019
]
100375150 (SUPT5H)
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100375150 (SUPT5H)
RNA polymerase I system
100375150 (SUPT5H)
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100375150 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW5_SPT5
Spt5-NGN
KOW2_Spt5
KOW7_SPT5
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
DUF1216
Motif
Other DBs
NCBI-GeneID:
100375150
NCBI-ProteinID:
XP_002740721
LinkDB
All DBs
Position
Un
AA seq
1095 aa
AA seq
DB search
MSDSEGSLSSDAESDQSYGANSEAEEAENSGNESDGGNQPDDGDGDDDVGSDSGSHSNQG
DDDEGDELMAEEDEYDSEEDEENNHRRKKSRYGGFILDEADVDDDYDDAVEEEEVEEGFQ
DLIDRNATTGDVEGDSHGARRLHQMWREQKEDEIEEYYKRKYADTTSGGRYDSNYEMSDD
ITQQGLLPGVKDPNLWMVKCKMGEEKATAVTLMRKFIAYQVQDEPLQIKSVIAVEGLKGY
IYVESYKQTHVKHAIEGIGNLRLGLWTQQMVPIKEMPDVLKVVKEVVTLKPKSWVRLKRG
VFKDDLAQVDYVEPAQNQVTLKLVPRVDYSRPRGIARTATDNQEKRKRNKKPTQKLFDVD
AIRAIGGEVSTDGDFLIFEGNRYSRRGFLYKTFAMSAIIAEGIKPTLSELEKFEDQPENL
DVELVPESKKSEKQLHNLAPGDSVEVIEGELVHLQGKIIGVDGDKITIMPKHEDLKEPLD
FPARELRKHFRMGDHVKVIGGRYEGDTGLIVRVEDNMVILFSDLTMHELKVLPRDLQLCT
EMSSGVDSLGQFEWGDLVQLDPQTVGVIVRLERESFQVLNMHGKLNNVKHQAVSQKKESR
NAVALDAEQNNIQVKDIVKVIDGPHSGRQGEVKHIYRSFAFLHSRLMTENGGIFVCRTRH
IVLAGGSRPAQIDPVSGYMSPHIGSPAHPGSGGVRGGGRGGGQGGGGRGRGRRDMELIGQ
TVRIREGPFKGYIGIVKDATESTARVELHTNCKTISVDKNRLNPVNQPTSRGSTTSYRHT
PLHPGQTPMYGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQTGAWDPTNRNTPA
RTDEFDYRFDEPTPSPAYGGTPNPATPGYSADTPPSNGPYTPATPGSSTMYSSSDHTYSP
YQHSSTPSPGGYQGTPSPANYQPAPSPGGYQPTPSPAYQQSPSPGGYQLTPSPGGYPMTP
GAPSPGGFNPLTPGASLDSGSSEWQTIHIEVKVKATHEDSALIYKIGVIRGISGGMCSVF
IPDEGRVVNVHSDHLEPVMPSKQDKVKVILGEDRESTGTLINIDGQDGIVKMDQAVGSDV
QLKILHLGHLGKFVE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagtgaaggcagtttatcttctgacgctgagagtgaccaaagctatggtgca
aacagtgaagcagaggaagcagaaaacagtggtaatgaaagcgatggtggtaaccagcct
gatgatggtgatggtgatgatgatgtaggcagtgattctggtagtcatagtaaccaaggg
gatgatgatgaaggcgatgagttgatggcagaggaagatgaatatgattctgaagaagat
gaggaaaataaccaccgccgtaaaaaatccagatatggtggttttattttagatgaagca
gatgttgatgatgattatgatgatgctgttgaggaagaagaagttgaagaaggatttcaa
gatttaattgatagaaatgctacaactggtgatgttgaaggtgatagtcatggcgctcga
cgattacatcagatgtggcgagaacagaaagaagatgaaattgaagaatactacaagaga
aaatatgctgacacaacttctggtggacgttatgatagtaactatgaaatgtctgatgac
atcactcaacagggactcttaccaggtgttaaagatcctaacttgtggatggtgaagtgt
aaaatgggtgaggaaaaagccacagcagtaacattaatgagaaagtttattgcataccaa
gttcaagatgaaccgctacagattaaatcggtcattgctgttgaaggactgaaagggtac
atctatgttgaatcatataagcagacccatgtgaaacatgctatcgaaggaatcggtaat
ctccgtcttggactctggacccagcagatggtaccaatcaaagaaatgccagatgttctc
aaagttgtgaaagaagttgtaactttaaaaccaaagtcttgggttcgattaaagaggggc
gtatttaaggatgatctggcgcaggtggactatgtcgagcctgctcagaaccaagtgacc
ctaaaacttgtaccccgtgtagattacagccgtccgcgaggcattgcaagaactgctaca
gataaccaagaaaagagaaaaagaaacaaaaaaccaactcagaaattattcgatgtggat
gccataagggcaattggtggtgaagtgtccaccgatggtgacttccttatatttgaaggc
aatagatacagcaggagaggatttctctacaagacatttgccatgagtgcaataatcgcc
gagggcattaagccaacgctttccgaattggaaaaatttgaagatcagccagaaaattta
gatgttgaattggtgcctgagtcaaaaaaaagtgagaaacaactacacaacttggcccct
ggtgacagcgtagaggtcatagaaggagagttggtacatctacagggtaaaattattggt
gtagacggagataaaataacaataatgccaaaacatgaagatcttaaggagccgctcgat
ttcccggcacgtgaattacgcaaacatttccgtatgggtgaccatgtgaaagtgattggt
ggaagatatgaaggtgacacaggtttgattgtcagagttgaagataacatggtgatattg
ttttctgatttgacaatgcatgagcttaaagtactaccaagggatttacagttgtgtact
gagatgtcctctggtgtagactcactgggacagtttgaatggggagaccttgttcaactt
gatccacagacagtgggtgttatagttagattagaaagagaatcattccaagtgctaaac
atgcacggcaagttaaacaatgtaaaacaccaagcagtatctcagaagaaagaatccaga
aatgcagttgcattagatgcagaacaaaacaatatacaagtcaaagatattgtgaaagtt
attgatggaccacattctggtcgtcagggagaagtgaaacacatctaccgtagctttgct
ttcctacattcaaggctgatgactgagaatggtggtatttttgtatgcagaactagacat
attgtactcgcaggaggatccaggcctgcacaaatagaccctgtcagtggatacatgtct
ccgcatattggcagtcctgcacatcctggtagcggtggtgtaaggggaggtggtcgcgga
gggggtcaaggcggcggcggtcgagggagaggaaggagggacatggaacttattggacaa
actgtgcgtattcgtgaaggtcctttcaaagggtacatcggcattgtaaaagatgccacc
gagtctaccgcccgtgttgaactacataccaattgtaagactatctctgttgacaaaaac
aggttaaatccagtcaatcaacctactagccgaggtagtaccacctcgtatagacataca
ccattacatccaggacagacgcccatgtatggttcacgtacacccatgtatggatcacaa
acgccattacatgatggtagccgaacacctcactacggttcacagactcccttacatgat
ggtagtcgtactccaggacagactggggcgtgggaccctaccaatcgaaatacacctgcc
agaactgatgagtttgattatcgatttgatgaacctacaccatcaccagcttatggtgga
acgcctaatcctgcaactccaggttactcagcagacacgcctcctagtaatggtccatac
actccagccacaccaggtagttctacaatgtacagtagtagtgatcatacatactctccg
tatcaacacagtagtactccatcaccaggcggttaccaaggtacaccaagtccggcaaac
tatcaaccagctcccagtccgggtggatatcagccgacgccgtcaccagcgtaccaacag
tctccatcaccgggcggttatcaattgacaccaagtccaggtggttatcctatgacacca
ggtgcaccttcacccggtggtttcaatcctttaacaccgggtgccagtctagattctggt
tcgtcagagtggcaaacgatacatattgaagtcaaagtgaaggccacacacgaagactcc
gcactcatttataaaattggtgtaattagaggaatttctggtggaatgtgttctgttttc
attcctgatgaaggacgagttgtaaacgtacacagcgatcatttagaaccagtcatgccg
tcgaaacaagacaaagtgaaagttatactcggagaagatagagagtccaccggaactctt
ataaatattgacggccaggatggaatcgtcaaaatggaccaagctgttggcagtgatgta
cagttgaaaattcttcatcttggacatttagggaagtttgttgagtag
DBGET
integrated database retrieval system
