Saccoglossus kowalevskii (acorn worm): 100375459
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Entry
100375459 CDS
T04123
Name
(RefSeq) THO complex subunit 4-A-like
KO
K12881
THO complex subunit 4
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
sko03015
mRNA surveillance pathway
sko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100375459
09122 Translation
03013 Nucleocytoplasmic transport
100375459
03015 mRNA surveillance pathway
100375459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100375459
03041 Spliceosome [BR:
sko03041
]
100375459
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100375459
TREX complex
100375459
Spliceosome [BR:
sko03041
]
Complex C
Other components
EJC/TREX
100375459
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100375459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
Motif
Other DBs
NCBI-GeneID:
100375459
NCBI-ProteinID:
XP_002731646
LinkDB
All DBs
Position
Un
AA seq
265 aa
AA seq
DB search
MGDKIDMSLDDIIKLNKPTGRGRGRGGRGGGSRGGARQFRGGRGAGGRGGPVRRTQQRGA
GRNRPTPYSRPKELPDSWEHDMFDGGVGLGVGGRALISRDGQSQQGKLLVSNLDFGVSDA
DIQELFADFGNLKRAAVHYDRSGRSLGTADVIFEKKNDAIKAMKQYNNVPLDGRAMNIQL
VTSATEVEQFQRRPSTGRGASGGGGGFVGTRRGSSRGGQRGRRRGGAPGRGGRGGGGGGG
GSRKVVTAEELDAQLDAYNAKMDID
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataaaattgatatgagccttgacgacatcattaagttgaacaaacctaccggg
agaggcagaggacgcggtggtcggggaggtggttcacgaggcggagcacggcagtttcgt
gggggacgcggtgctggaggtcgcggtgggccagtaagaagaactcaacaaaggggagcg
ggcagaaacagaccaacaccttattctaggccgaaggaacttccagactcgtgggaacat
gacatgtttgatggcggcgttgggcttggtgttggtgggagagctctgatatccagagat
ggacaatcacaacaaggaaaactactagtgtcaaatttagattttggagtatctgatgct
gatatacaggagttatttgctgactttggcaatcttaaaagggcagcagtgcactatgac
cggtcaggaagaagtttgggaacagcagatgtaatatttgagaagaaaaatgatgctata
aaagccatgaaacagtataacaatgtgcctttagatggtcgagcgatgaatattcaactt
gtgacgtcggcaacagaggttgaacagttccagagacggccgtcgacaggacgaggagct
agtggcggaggtggtgggttcgtaggaacaaggaggggcagttctagaggtggccagagg
gggcgaaggagaggcggagctccaggacgagggggtcgtggtggcggtggtggtggtggc
ggttcacgcaaagttgtcacagctgaagaacttgacgcacagttagacgcttataatgca
aagatggacattgactaa
DBGET
integrated database retrieval system