KEGG   Saccoglossus kowalevskii (acorn worm): 100375459
Entry
100375459         CDS       T04123                                 
Name
(RefSeq) THO complex subunit 4-A-like
  KO
K12881  THO complex subunit 4
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013  Nucleocytoplasmic transport
sko03015  mRNA surveillance pathway
sko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100375459
  09122 Translation
   03013 Nucleocytoplasmic transport
    100375459
   03015 mRNA surveillance pathway
    100375459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100375459
   03041 Spliceosome [BR:sko03041]
    100375459
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100375459
    TREX complex
     100375459
Spliceosome [BR:sko03041]
 Complex C
  Other components
   EJC/TREX
    100375459
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100375459
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT
Other DBs
NCBI-GeneID: 100375459
NCBI-ProteinID: XP_002731646
LinkDB
Position
Un
AA seq 265 aa
MGDKIDMSLDDIIKLNKPTGRGRGRGGRGGGSRGGARQFRGGRGAGGRGGPVRRTQQRGA
GRNRPTPYSRPKELPDSWEHDMFDGGVGLGVGGRALISRDGQSQQGKLLVSNLDFGVSDA
DIQELFADFGNLKRAAVHYDRSGRSLGTADVIFEKKNDAIKAMKQYNNVPLDGRAMNIQL
VTSATEVEQFQRRPSTGRGASGGGGGFVGTRRGSSRGGQRGRRRGGAPGRGGRGGGGGGG
GSRKVVTAEELDAQLDAYNAKMDID
NT seq 798 nt   +upstreamnt  +downstreamnt
atgggcgataaaattgatatgagccttgacgacatcattaagttgaacaaacctaccggg
agaggcagaggacgcggtggtcggggaggtggttcacgaggcggagcacggcagtttcgt
gggggacgcggtgctggaggtcgcggtgggccagtaagaagaactcaacaaaggggagcg
ggcagaaacagaccaacaccttattctaggccgaaggaacttccagactcgtgggaacat
gacatgtttgatggcggcgttgggcttggtgttggtgggagagctctgatatccagagat
ggacaatcacaacaaggaaaactactagtgtcaaatttagattttggagtatctgatgct
gatatacaggagttatttgctgactttggcaatcttaaaagggcagcagtgcactatgac
cggtcaggaagaagtttgggaacagcagatgtaatatttgagaagaaaaatgatgctata
aaagccatgaaacagtataacaatgtgcctttagatggtcgagcgatgaatattcaactt
gtgacgtcggcaacagaggttgaacagttccagagacggccgtcgacaggacgaggagct
agtggcggaggtggtgggttcgtaggaacaaggaggggcagttctagaggtggccagagg
gggcgaaggagaggcggagctccaggacgagggggtcgtggtggcggtggtggtggtggc
ggttcacgcaaagttgtcacagctgaagaacttgacgcacagttagacgcttataatgca
aagatggacattgactaa

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