Saccoglossus kowalevskii (acorn worm): 100375522
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Entry
100375522 CDS
T04123
Symbol
FREM1
Name
(RefSeq) FRAS1 related extracellular matrix 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100375522 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sko04091
]
100375522 (FREM1)
Lectins [BR:
sko04091
]
C-Type lectins
Lecticans
100375522 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Big_9
DUF807
UL45
Chordopox_A33R
Motif
Other DBs
NCBI-GeneID:
100375522
NCBI-ProteinID:
XP_006816147
LinkDB
All DBs
Position
Un
AA seq
2103 aa
AA seq
DB search
MLQTVFHLVTLLVSIPTVIGQLVAVNNGLTVMIGRTKFLDPADLTFNLPDVDEGECKVEV
VLNEPMTQRVGVLTPQVFDCNFYSTTVQYKHNGSPILLSDTIKLKVYHLTDSQTQTQIFD
LNIEIEKIGYKVFFPISSLRVEDFLGMSNTLDRHVLEFLYNRVTGASCVVTFSRVLDHQP
QFGQLVTGDGEHRKVLRYFKESCDDFLKMGIRYEHLLPPSPDIDYVALAVTTIDPLDNNR
EYQEKLFLPVHIMPGFKNQKPSASFISMYVLDADEFVLTTITPFVLSSQDEETPNSQLVF
NISHPLEKGQGEIVHLNDLSKPVTSFSQIDVDNFNIAYNPPNISYSERKVYNIELTVYDG
YFEASEPIMLMLAVRSSSTNAPRVSLNKGLTMLEGQSRPITLENLQVVDNDNLKDVRLIV
IGGLQHGTLKQNGHPIIMFTPFDLQHGTVNYYHDDSDSTRDKIELRLTDGTHSSRLSLPI
NILPKDDSPPFLITNVLFQLNEGETVLIGKEMLHATDADSSDDYITYKITQQPNGGEIIK
KFSWDSYGHPVDQFTQKDLFRGLIYYRHLGQEIFQDFFSFVLLDSHVPPNESPEHSVIIH
IESVDDLQPQPIRGTHQAIRLKETDINFIERNNLQYTDVESADMELVYTITTPPYFADTH
SLNDAGRVFSTNGLTMLMKDPTVVPLRTFTQHEINHRKVAYMPPFREIGATDRQIQFIFS
VSDPYGNTVVGQIFNITVLPVNNQSPVIYTSDMIINEGGSLIMGPSLLAAADKDTSLTDL
IFSVERLPQYGVLEKDAVVMDTGDTFNIDDVNSFKIRYTHDGSEVEADNCALSISDGVQS
TSEDIFFKIIPINDQLPQLNAGLNPNIRVPESGHMTLTPRMLSAIDSDTNDMVLNFIIVS
PPVRGIMQRDFATVTTFTQRDIVDGNIRYVHTGGEIGPRPVFDRVTILVSDQIIPSTSNL
PLHDLNITIVPINNQPPNILLFDAIHVPEGGKWGLTRNVLDVNDPDTDADQIMLIITSQP
TWGYLENILPSPGHEKSNAGKRISSFSFKDVVDGNIYFMQSVHEGVEPTSDWFVVYADDG
KNISPQVTLNVMILPQNDEVPNFVSNDITLNEGSVYRLDQATMNIVDIDVPQETLVVSIS
KQPEHGYVIDMSSYRRKRHAPGEKYGERQPEVIHEFTVDAFLTSLELVYQHDGSESTSDQ
LGVRLTDGVHTVRKTININIIPMNDEPPVVIKNTGVTINMHETVILSAVVLQARDVDTTD
ANLIYTVHNTPDKGILQVKKTYLRQLPRWEPVDLYSNFTQHDVNMNLLRYAHTGGLGSKA
NDKFRFTVTDGKHTTRRETFDINILNTKKDDIMVTSGDVEVGEGNVVVITTDTLSASDNT
NLLDEIVFTVVDPPTEGQIEEISHPGIKINSFTLLDLVARTVVYKHMRNNGINKDSMNFI
VSNGLSSRNGTLRIHVIPIDDALPIMYVNTDFAVDAGSARLLTESDLLLVDPDSDNQELT
YIVIKPPEFGHLLKQGQPVHHKFTQTDINNLHILYKQDGGRSREDAIFLIASDNTNAGFI
VDEDVRYEPIEFRIQINAVRSEYPHIINNQPATTLDDYNGRYGYTLTNFNLKVMDKDSLD
SNIIYVVTRLPLFGYLEFKGGRQFFHRTFTQEDVNNLNVIYFMHDELKQTNDSFEFEVHD
SHQNKLSNQRFDLHWTIIQMVRAEYVVCENIGTLSVNIQRLGHLAESSFITVKVKGVSAT
YETDFVPSTAELIQFDPGVAIATWNVLIVDDGLEENEERFRVMLKSPINAILGDNEKATV
LIVDSRNGQCDSGIYPDIISKSPDRSADSVVRSDDTSRVGSYVFQTGGNKAQVSSQVIFS
NATSTVWRNHGLISVRTDQDSPETQESPGVPDRLEGSILSPRITITDPRSPQEQTEDKET
TVIRVSGPSRCNESSVGVLHFDTSANKMYQCDGYRWIQWSESETNKQKSNHCNKGWSYHK
NLCYRVGGEEKTWNDAQRTCRELYYGNLPSVSSNEDQNWLWVFAGGRSVWIGLNDKYVEG
NWEWIDGSPLTFTSWKRGNPKPESPTDRNCAMLGPRLRWQDKHCDRVTSTFVCAVPTTRR
NRR
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacagtatttcatctggtcactctacttgtatctatccccactgtgattggt
cagctagtggcagtgaacaatgggttgacagttatgattggccggacaaagttccttgat
ccagctgatttgaccttcaaccttccagatgttgatgaaggtgaatgtaaagttgaagtt
gttttaaatgaaccaatgacgcagcgagtcggtgttcttactcctcaggtatttgactgt
aatttctattctacaacagtgcagtacaaacacaatggctcaccaatcctgttgtctgac
accatcaaactcaaagtttatcatttaacagactctcagacgcagactcagatttttgat
ttgaacatagaaatagaaaaaatcggctataaagtatttttcccaatttcatcactgcga
gttgaagattttttgggaatgtctaatactcttgatcgacatgtcttggagtttttgtac
aacagagtgaccggtgcgtcatgtgtggtgacattttcacgtgtattagatcaccagcct
cagtttggacagcttgtaacgggagacggggaacatcgtaaagttttacggtatttcaaa
gaaagttgtgacgatttcctgaaaatgggaattcgatatgagcacctcctcccaccatca
cctgatattgattacgtggctttagcagttacgactattgatccgcttgacaataaccgt
gaataccaagaaaaattgttcctacccgttcacataatgccgggattcaagaaccaaaaa
ccaagtgcatcattcataagtatgtatgtccttgatgccgatgagtttgtgttaacgaca
ataaccccatttgtactgtcatcacaagacgaggaaacccccaattcgcagctggtcttc
aacattagtcatcctcttgaaaaaggtcaaggagaaattgttcatctcaatgatttgtct
aaaccagtcacgtcattttcacagattgatgtagataattttaatattgcatacaaccca
ccaaatattagctacagcgaaagaaaggtatacaatattgaattgactgtttatgatgga
tattttgaagcaagtgaaccaattatgttgatgttggcagttcgatcatcatcaacaaat
gcaccgagagtatcactgaacaaaggcttgacaatgctggaaggccagtcccggccaatc
acattggagaacttacaagtagttgacaatgataatctcaaagatgtaaggctgattgtg
attggtggattacagcatgggactctaaagcaaaatggccacccaataataatgttcacg
cctttcgacttgcaacatggtactgtaaattattaccacgatgacagtgattctactaga
gacaaaatcgaattgagattgacagatggaacacatagttctcgactgtctcttcccata
aacattcttcctaaagatgacagtccaccatttttaatcactaacgttctctttcaacta
aatgaaggtgagactgtccttattggaaaagaaatgctacacgcaaccgacgcagactcc
agtgatgattacatcacatataaaattacccagcaaccaaatggcggagaaattatcaag
aaattttcttgggattcgtatggacatccagttgaccagttcacccagaaagatctgttt
cggggattgatttactaccggcatttagggcaagaaatatttcaagatttcttttcattt
gttctgttagatagtcatgtgccaccaaacgagtcaccagaacattcggttattattcat
attgagtctgttgatgatctacagccgcagccaattagaggaacacaccaagcaattaga
ttgaaggaaacagacatcaactttattgaaagaaacaatttacagtacactgatgttgaa
tccgctgatatggaacttgtatacactatcacaactccaccgtattttgcagacacacac
agtttaaatgacgctggacgtgttttttcaaccaacggactaacaatgcttatgaaagac
ccaacagtggttccgcttcgtacgtttacgcaacatgaaatcaatcatcgcaaagtggct
tatatgcctccattcagggaaataggagccactgacagacaaatacagttcatattttct
gtcagcgatccctatggcaacactgttgtgggtcagatttttaacatcacggtgctccca
gttaataaccaatcaccagttatttacacgagtgacatgatcattaatgagggcggcagt
ttaattatgggaccgtcattattggcagccgctgacaaagataccagtttgacagatttg
attttttcagttgagcgtctaccccagtatggtgttcttgaaaaagatgcagttgtcatg
gatacaggtgacactttcaatattgatgatgttaattcatttaaaatcaggtatacccat
gatggttcagaagtagaagctgataactgtgccctgagtattagtgacggtgtgcaatca
acaagtgaagatattttcttcaaaatcataccaatcaatgaccaactaccgcagttgaat
gcaggtttgaaccctaatatacgagttccagagtcaggtcatatgactttaacgccaagg
atgttatctgcgattgacagcgatacaaatgatatggttcttaatttcatcatagttagt
cctcctgttagaggaatcatgcaaagagactttgctacggtgacgaccttcactcaacgg
gacattgtagatggaaatatacgatatgtgcatacaggtggcgagattggcccgcggcct
gtgtttgatcgtgtgacaattctggtatctgatcagatcattccatcaacgagtaacttg
ccgctacatgatttaaacatcaccattgtgccgataaataaccagcctccgaatatttta
ttatttgatgcaatacatgtccctgaaggtggcaagtggggtctgacaagaaatgtactg
gatgtcaacgatccagacactgatgctgaccagataatgctcataattaccagccaacca
acatggggctatttggaaaacattctcccatcaccaggccatgagaaaagtaatgctgga
aaacgaatttcttcattttcgtttaaagacgttgtggatggaaatatatacttcatgcag
tcggtccatgaaggcgttgaaccgacctcggattggtttgtagtttatgcagacgatggt
aaaaacatatccccacaggttacattgaatgttatgatccttccgcagaatgacgaggtg
ccgaactttgttagcaatgacatcacgctaaatgaaggtagtgtttatcgattagatcag
gcgactatgaacattgttgatattgatgttccgcaagaaacactggtggtttccatcagt
aaacagccagagcatggatatgtcatagacatgtctagttatcgaagaaagaggcatgcc
ccaggtgagaagtacggggaacgtcaaccagaagtgattcatgaattcacggttgacgct
ttcctgacttctctggagcttgtttaccagcatgacggatctgaatcgaccagtgatcaa
ttaggagttcgtctaactgatggcgtgcatacagtcagaaagacaatcaacatcaacatt
ataccgatgaatgatgagcctcctgtagtcatcaagaatactggtgttacgattaatatg
catgaaactgtgattctttctgctgtagtgctacaggccagagacgtagacaccacagat
gctaatctgatttacaccgtacataacactccagataaagggatactgcaagttaaaaag
acttacctcagacagcttccaagatgggaaccagtggatctctattcaaacttcacccaa
catgatgtcaacatgaatctcctgcgatacgctcacacaggcggtcttggttcaaaagcc
aatgataaatttcgcttcactgtaactgacgggaaacatacaaccagacgagaaactttt
gatattaacattctgaacacaaaaaaagatgacatcatggttacaagtggtgatgtggaa
gttggggaaggaaatgttgttgtcataacaactgatacattgtcagcctccgacaatacc
aacttattagatgagattgttttcacagtcgttgatccgcccacggaaggtcaaatagaa
gagatatcgcatccaggaataaaaatcaattcatttacattgttggatctggtggcgcgt
actgtcgtgtataaacacatgaggaacaatggcattaacaaagacagtatgaatttcatt
gtctctaacggattgtcatctcgaaatggaactctgcgtattcacgtcattccaatcgat
gatgcattacctattatgtacgtcaacacggattttgccgttgacgcaggaagtgctcgc
ctcttgactgaaagtgatctcctattggtagatccggatagtgataatcaggagttgacg
tatattgtaataaaaccgcctgaattcggacacttgctgaaacaaggtcaaccagttcat
cacaaatttactcaaactgacatcaataatttgcatattctgtataaacaagatggcgga
agatccagagaggatgcaatatttcttatcgctagtgacaacaccaatgctggctttatt
gttgatgaggatgttcggtatgaaccaatagaattccgcattcaaattaacgcagttcgt
tctgaatatcctcatatcatcaacaaccaaccagcaacgactctggatgattacaatggt
cgttatggttacacactgacaaacttcaatctgaaagtaatggacaaggattcgttggat
agcaacatcatctatgtagttaccaggctaccattgttcgggtatttggaattcaaaggc
gggcgtcaatttttccatcgcacgttcacgcaagaggatgttaacaatctcaatgtgatt
tatttcatgcacgacgaactgaagcaaacaaacgacagtttcgaatttgaggttcatgac
tcgcaccagaataagctaagtaaccagaggtttgatttgcactggacgattattcaaatg
gtacgagctgaatatgtggtctgtgaaaacattggtacactcagtgtcaacattcaaaga
ttgggccacctagctgagtcatcattcataactgtcaaagtgaaaggagtttcagctact
tatgaaactgactttgttccaagcacagctgaactgatacagtttgatcctggtgttgct
atagcgacatggaatgtgttgattgtcgatgatggtttggaagagaatgaagagagattc
cgagtgatgttaaagtcaccaattaatgctatattaggagataacgagaaagccactgtt
ctcattgtggattccaggaatggtcagtgtgacagtggtatttaccccgatattatcagt
aagtcacctgataggtcagctgacagtgtagtaagatctgatgatacatctagagtgggt
agttatgtttttcaaactggaggtaacaaagcacaggtgtcatcacaagtgatatttagc
aatgctaccagcactgtctggaggaatcatgggctgatctcggttaggactgatcaagat
tcaccagagacacaggagtcgccaggggtaccggatagattagaaggtagcatattgtct
cccagaattactataactgatccaagatcgcctcaagaacaaactgaggacaaagaaact
acagtaattagggtgtctggtccatcacggtgtaatgagtcatctgttggtgttttacac
tttgacacatcagccaataagatgtaccagtgtgatggttaccggtggatacagtggagt
gaatcagaaacaaacaaacagaaatcaaaccactgcaacaaaggttggagttaccataaa
aacctgtgttatagagttggtggtgaagaaaaaacttggaacgatgcgcaacgaacctgc
cgggagctttactatggcaaccttcctagtgtctcctcaaatgaagatcagaattggtta
tgggtttttgcaggaggaagatcagtttggattggattaaatgacaagtatgtagaaggc
aattgggaatggattgatggatcgccattaactttcacatcttggaagcggggaaatccc
aaaccagaatcacctaccgatagaaactgtgctatgcttggtccaaggctccgatggcaa
gacaaacactgcgaccgagtcacctctacgtttgtttgtgctgttcctacaactcgcaga
aaccgtagatga
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integrated database retrieval system
