Saccoglossus kowalevskii (acorn worm): 100375547
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Entry
100375547 CDS
T04123
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2-like
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sko03036
]
100375547
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100375547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
CHD1-like_C
Chromo
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
100375547
NCBI-ProteinID:
XP_006823398
LinkDB
All DBs
Position
Un
AA seq
1420 aa
AA seq
DB search
MDKVGREKNSAPGVEEDEVNSEQQTSEGSGASSNESSSGSNSSSDSDSQSGSESGSESGS
QNGNEDQSNSQSESANSESQSSESASENEDSGHDYCINTTNDNKTNSIPSCKITLSKKER
LKDLKEMWEEFPDVYGVRRSSRSRKEVERFQASSDEDDSDYSDSPKKGRGNNAGERNKRR
RSGEWRTGRLSDDTSGESSESDFQPSTRARPKPKSRQVSRSQARVKGKSMPKRRSASRRK
KASSSEDDDDDSENERKRFMQRRAASKVCYKEDSDDVTDSDDIIETNQVEEDDNKETIEK
VFNHRRGKKGQTGSKTTVYNIEATKDDAGTQPTQGNTEENDETEIQYLIKWKNWAHIHNT
WETEESLRTQAVKGLKKLDNYKQREEELGLWKTMTTPEDVEYYECQQEMALQLYGQYQEV
ERIIAHTNQKTAEVNSGQPDFLCKWKGLPYCECTWEDGELVSRNSQTAIDNYFIRLRSSK
VPSKISKVLKQKQRFVALKSQPSFLGGADKMELRDYQLDGLNWLLHSWCKENGVILADEM
GLGKTIQAIAFLSYLFNTYQLYGPFLLVVPLSTMTAWQREFEIWAPDLNVVVYIGDLVSR
NKIREYEWCFAGNRSRLRFNALITTYEILLKDKSFLNSVNWSNLIVDEAHRLKNDDSLLY
KTLMDFHTHHRLLITGTPLQNSLKELWSLLHFIMPVKFDSWEQFEKEHMADQNGYTSLHK
VLEPFLLRRVKKDVEKSLPAKVEQILRVEMSAKQKQYYKWILTKNYKALSKGLKGNLSGF
LNIMMELKKLCNHPYLIRPEDNGITDLENLIRTSGKVHLLDKLLTRLHETGHRVLIFSQM
VRMLDILADYLSMKHWPFQRLDGSISSEVRKQALDHFNAEGSMDFCFLLSTRAGGLGINL
ATADTVIIFDSDWNPQNDLQAQARAHRIGQRNQIGPKGKRGRKPKEPKDTKPVNASKPPK
GRKNKKAEKENKTDEIKEENENSLEAGEIVETHKEPETKKKKKKGKDSKKSKDKASKKES
KNEKSKLKEESKSAKKVVDSTIPLHITANTNPVPVDAVDVMGDLDENVFAMCKEKMRPVK
KALKQLDNPPAEVSEKEQLNHTRQCLLKIGDRIMDCIDDFKDNPTKMREWKSYLWTFVSK
FTEFDARKLYRLYKHAVKKREEERGEEHTSHSQSSISSKKRFSDGHDSKIRKDRSSTGLH
GNKRPFSNLDLHSDDSRGSITNGPRVSTSTAATTGSGSPYGHFNQSRNTQSWSHDTYTTT
NRDFFRERHLNDTTTAFSRHLHDPLRPSSHGVSSSYHSPGSSRDNHDNYHYQHSSSSSAS
RFNNDHPRDRPSASSSSSSRQYSHGNRDEHRHHYSNDKQEHVSYSQHQSGSRDDRFHHSH
SNNKRRKADDYRDRDRDRDREQRTDSRLSSANSRKSEHRH
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggataaggttggccgggagaaaaattcagctccaggtgtggaagaagatgaagtcaac
agcgaacagcaaacatcagaaggaagtggcgcttccagtaatgaaagcagctctggatcc
aactctagttcggattcagattcgcagtctggatctgaaagtggttctgaatcaggaagt
cagaatgggaatgaagaccaaagcaattcacagtcagaatctgcaaattctgaatcacaa
agttcagaatcggcatctgagaatgaagattcaggacatgattattgcataaacacaaca
aatgacaacaaaaccaactccattccatcttgtaaaattacactcagtaaaaaggaaaga
ctaaaagacctgaaagagatgtgggaagagtttccagacgtttatggcgtgcgaagatca
agcagatcccgaaaagaggttgaacgttttcaggcttctagtgatgaagatgacagtgat
tatagtgatagtcctaaaaaggggagaggaaataatgctggagagaggaacaaacgaagg
cgaagtggagaatggaggactggacgtctcagtgatgacaccagtggtgaaagcagtgaa
tcagactttcagccatctacaagggctagaccaaaacccaagtcaaggcaagtttcgaga
tctcaagcacgggtaaaaggaaaatcaatgcctaagaggagatcagcgagccggagaaag
aaagcctcctcctctgaagatgacgatgatgacagtgaaaatgaaagaaagcgatttatg
caaaggagagcagcttcaaaagtatgttataaggaagacagtgatgatgtcactgactct
gatgatatcattgagacaaatcaagtagaagaagacgataataaagagacgatagagaaa
gtgttcaatcaccgaagaggaaagaaaggacagactggatctaagaccactgtgtataac
attgaagcaaccaaagacgatgcaggtactcagccaactcagggaaacacagaagaaaat
gatgaaacagaaattcaataccttatcaaatggaaaaactgggcacatattcataatacc
tgggaaactgaggaaagtcttcgaacgcaggctgtcaaagggctgaagaaacttgacaat
tataaacagcgagaagaggagcttgggctgtggaagactatgacaacacccgaagatgta
gaatactatgaatgccagcaagaaatggcattacaactttatgggcagtaccaggaagtt
gagagaattatcgcccacactaatcagaaaacagcagaggtcaattcaggacaacctgac
ttcttgtgtaaatggaaaggtctgccctattgcgagtgtacatgggaagatggggaactg
gtatcaagaaattcgcaaactgcaattgacaattattttatacgattgcggtcttcaaaa
gtgccatctaaaataagcaaggtgcttaaacagaagcaacgctttgtagctctcaagtct
caaccatcttttcttggtggtgcagataaaatggagctgagggattaccagctggatggc
ctgaactggctacttcattcatggtgcaaagagaatggtgtgattttagccgatgagatg
ggtcttggtaaaacaattcaagcgatagcatttttatcgtacctgtttaatacctatcaa
ctgtatggtccttttctattggtggttccactctcaacaatgacagcgtggcaacgagag
tttgaaatttgggcacctgatcttaatgttgtagtttatatcggtgatctggttagtcga
aataagattcgtgaatatgaatggtgctttgctggtaatagaagtagacttagattcaat
gcactcattacaacttatgaaattcttctcaaagacaagtcattcctcaacagtgtgaat
tggtccaatctcatagtggatgaagcccatcgattaaaaaatgatgactcgctgctttat
aaaactctaatggacttccacacacatcacaggttgcttatcactggcacacctttgcag
aactctttgaaagaactctggtccctacttcatttcattatgccggtaaagtttgattcg
tgggaacaatttgaaaaagagcacatggctgatcagaatggttatacaagtttacacaag
gtgttagaaccattcttgttgaggagagttaaaaaggatgttgagaaatcattgccagct
aaagtagaacagatcttacgggtagaaatgtcggccaaacagaagcaatattacaaatgg
attcttacgaaaaattataaagcgttgagtaaaggtctaaagggaaacttaagtggtttt
ctaaatattatgatggaattgaagaaattatgtaatcatccttatcttatacgtccagaa
gacaacggtataaccgatctcgagaacctaattagaaccagtggtaaagtacatttatta
gataaactactaaccaggctacacgagacgggacacagggtgctgatcttttcccagatg
gttaggatgttagatatattagctgattatctttctatgaaacattggccattccagagg
ttagatgggtctatttctagtgaagtcagaaaacaagcattggaccacttcaatgcagag
gggtcgatggatttttgtttcttgctatcaacaagagccgggggtcttggtataaatcta
gctacagcagatacagttattatctttgattccgactggaatccacagaatgacctccaa
gcacaagcgagggcacacagaataggtcaaaggaatcagattggtccaaagggaaaaaga
ggaagaaagccaaaggaacctaaagataccaaacctgtcaatgcttcaaaacctcccaaa
ggtagaaaaaacaagaaagcagaaaaagagaataaaactgatgaaattaaagaagaaaat
gaaaactccttggaggcgggtgaaatagtagaaacgcacaaagaaccagaaactaagaaa
aagaaaaagaagggtaaagattccaaaaagtctaaagataaagcaagcaagaaagaatct
aaaaatgaaaagtcaaagttaaaagaggaaagtaaatctgccaagaaggttgttgatagc
acaataccattacatatcactgctaacactaaccccgtacctgttgatgccgttgatgtg
atgggtgatcttgatgaaaacgtctttgcaatgtgcaaagagaagatgaggcctgtgaag
aaagctttgaaacagctggacaaccctccagctgaagtatctgaaaaagaacaactaaac
cataccagacagtgcctgttgaagataggagacagaatcatggactgtatagatgacttc
aaggataatcctacaaagatgagggagtggaaaagttacctgtggacgttcgtctcaaag
ttcacggagtttgatgctaggaagctttacaggctttataaacatgcagtgaagaaaagg
gaggaagaacggggagaggaacatacaagccactcacagtccagtatatcaagtaaaaag
aggtttagtgatgggcatgattcaaagataaggaaagaccggtcatcaacaggattgcat
ggaaataaacgaccattcagtaatcttgatttacatagcgatgacagcagaggaagcatt
acaaatggtccaagagttagtactagcacagctgcaaccactggaagtggttctccatac
gggcatttcaaccagtcccgaaatacccaatcctggtcacatgatacctatactacaacg
aatcgagactttttcagggaaagacacctcaatgatacgaccactgcatttagtcgacat
ctacacgatccgttgcgaccctcatcacatggcgtcagtagtagctatcactcgccaggt
agtagcagagacaaccacgataactatcattatcaacatagttcttcctcttcagcttca
agattcaataatgaccatccaagggatcgaccttcagcatcttctagtagtagcagcaga
cagtattcccatggcaacagagatgaacatcgtcatcattatagtaatgataaacaagaa
catgtgtcttacagtcagcatcagtctggcagccgtgacgaccgcttccatcattctcat
tcaaataacaaaaggaggaaagcagatgattacagagatcgtgaccgtgacagagatagg
gagcaaaggacagactctcgactcagtagtgccaacagtagaaagtctgaacatagacac
tga
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