Saccoglossus kowalevskii (acorn worm): 100375589
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Entry
100375589 CDS
T04123
Name
(RefSeq) roundabout homolog 2-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sko04515
]
100375589
Cell adhesion molecules [BR:
sko04515
]
Immunoglobulin superfamily
ROBO family
100375589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
fn3
C2-set_2
Izumo-Ig
Cpta_toxin
Motif
Other DBs
NCBI-GeneID:
100375589
NCBI-ProteinID:
XP_002738154
LinkDB
All DBs
Position
Un
AA seq
1370 aa
AA seq
DB search
MFSRKKYFGAVFVFLFSVLVAAARRHTDDFAPRITEHPTSIIXSKSEPATLNCKAEGQPR
PEIEWYKDGELVETIAENPKSHRTLLPSGSLFFLRIIHGRRTKPDAGVYQCVATNYLGTA
YSNNATLEVAILKDEFRIEPIDTVAAVGETAIMECAPPRGYPEPTAQWEKDGEIIVPDND
RVQILVEGNLVFSEVRREDGGTFVCIGVNMVGSIRGREATLVVREKPTFLVSPQDVTAVV
ADNVEFHCSVTGDPQPTVRWGRENGQLPQGRFQILDDYTLRIRHISIDDEGTYICIGENM
VGESHASAELSIHDEPAFTTVPRDRVVAVNRMATFECVATGNPQPAIFWQKDGQQELLFP
GQVQGRFAVTQDGELQISQVRREDEGYYTCSALSVAGTSTVKAHLRVTVLTDRPPPIVRL
GPSNQTLAVGGIAMLPCQASGNPSPTIRWMKDNFMLLGNPRIALLDSGTLQISDLRVADT
GMYTCIASSDSGETLWSASLLVIEPTESTTSQLHRTPEPSSFPGPPSRPVASNITGTSVR
LTWRQNSNSGTSQVTSIVPAAAQETADLDVLSKLNEAGITISKIEASSATEVTVFLHIEK
HHNNIDGFHLKVTAVKSRSEHIETVSNNHESRGRNSLRQFSIGQLSPFTHYKITAAPFNY
GSNAVINGNECAPKEVTTLMASPSAPPRSVTAKSNGSDAILVEWQPPPKDHQNGIIRGYK
IWCQGNETRFNVNKTTDNTTFSYLFNDLVPGMLYVVKVTSFTNGGAGIASETQLVQLDPV
LVANMEPQSPSLAKKIRGVVSQPWFIGTIGVIIWMSLLVFSIVLYRRRKKKQSNCFDNIK
LEIASLNRDGTTPWMEQSWQQNSGEHSCHDLIRLCCPLSKKSKGPKQPALNWADLLPPPP
EHPPPTDIDETPPGSPQYHILGSPIPSQYSVKSSQGYQTDPHDEIASLVPSHRSHGSVVN
RHHLQGSNHSTPNPTPPTRRHPDCHMGTEMLLPGSMRNDHGIYRDNSSDKTSRSKKNSRN
GPTHHNTNRSGSSHRDMRNDPECHELCNSLPLQNCESDNEDGPPDEHLMPMLPARLEDTP
HGPGLCIDLRPSDHMMYSEVSDEDTSAKEDDPEEIDGDTESNCTGSMMASWASLDGSSGT
SVRCSAASDTSDGSFFNDADFASAVAAAAESAGLKVEGTKVIDPSRGGNRRLTPAQRAVQ
RSGSPLTDSDSNAGGNHKQKYHRKQPHDLQRNIMKPIVAAKNERVMPPVKPVKPEKPDKP
EKLSERRSSHKRPQKARQETGHSQQHQQGVNPADEVIPYNKPNFPSQSSSDTSSRGSTGR
RKCEKPYHPPVINEGSNEVGYCLRETNDSGLHVTANPMAFEHDTSNHFKA
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaagaaagaaatattttggtgctgtgtttgtatttctcttcagtgtactcgtt
gctgcggccagacgacacactgatgactttgcacctcggattacggagcatccaaccagc
atcatangttccaaaagcgaaccagcaacgttgaattgcaaagccgagggacagccaagg
cccgagatagagtggtataaggatggcgaattggtagagacgatagccgaaaatcccaaa
agtcatcggacattactccccagtggatccctgtttttccttaggataatccatggaaga
cggactaagccagatgcaggggtgtatcaatgtgtggctacaaactacttaggaactgca
tatagtaataatgctacgttagaagttgcaattttaaaagatgaatttcgaatagaacca
atagacacagtggcagctgttggagaaactgccatcatggagtgtgctccacctagagga
tatcctgagccaactgcacaatgggaaaaggacggagaaataatagttccggataatgac
agggtacagattttggtggaaggaaatcttgtattttcagaggtgcggagagaagatggc
ggcacatttgtatgtataggtgtaaatatggtaggctccataagaggtcgcgaagcaaca
cttgtagtgagagaaaaaccaacattcctagtgtcaccgcaggatgtgacagccgtggtg
gccgataatgtggaattccattgtagtgttacgggtgatccacagcccactgtacgatgg
gggagggaaaacggccaactaccgcaaggaaggtttcaaatattagatgactacacactc
aggatacgtcacatttcaattgatgatgaggggacttacatttgtattggagaaaacatg
gtaggagagagtcatgcaagtgcagaactcagtatacatgatgagccagcattcacaaca
gtaccaagagatagggtagtggcagtgaacagaatggcaacttttgagtgtgttgccact
ggcaacccacaaccagctatattctggcagaaagatgggcaacaggaactgctatttcct
ggacaagtacaaggtcggttcgcagttactcaggacggggagttacagatatcgcaagtg
agacgcgaagacgagggttactatacatgctctgctctcagtgtagctgggacgtcaact
gtaaaagcacaccttagagtaacagtattaacagatcgacctcctccaattgttagactg
ggaccgtccaaccagacgttagctgtaggcggcattgcaatgttaccgtgccaagcatcg
ggcaatccatcaccaaccatccgatggatgaaggataacttcatgttgctaggcaaccca
aggattgctcttcttgactcaggtacacttcagatttctgatttgagagtggccgatact
ggtatgtatacatgcatagcatcaagtgacagtggtgagacattatggagtgcatctttg
ctggttatagaaccaacagagtcgacaacctcgcagttgcaccgaacaccggaaccgtca
tcatttcctggccctccgtcccgacccgttgccagtaatataaccggtacatccgtcaga
ctgacctggagacaaaactctaattctggaacttcacaagttaccagcatagtcccagcc
gcagctcaagagacagctgatctggatgtattgagtaaactcaacgaagctggaattaca
atttcaaaaattgaagccagtagtgctacagaagttacagtatttttgcatattgaaaaa
caccacaataacattgatggatttcatctgaaagttactgctgtaaagagccgctctgag
catattgaaacggtatcaaacaaccatgaatcaagggggagaaacagccttagacagttt
tcgattggtcagctgagcccattcactcattataaaataacagctgcaccatttaattat
ggatctaatgcagttataaacggcaatgagtgtgctcccaaggaagtgacaacactaatg
gcatctcctagtgctcccccgaggagtgtgactgctaaaagtaatggcagtgatgctatt
cttgttgagtggcagcctcctccaaaagaccatcagaatggaataattcgtggatataag
atttggtgtcagggtaatgaaactcgtttcaatgtcaacaaaacaaccgataataccacg
ttttcgtatttattcaatgatcttgtgcctggaatgttatatgtggtaaaagtcacatcc
ttcacaaatggtggagctggtatcgctagtgaaacacagctggtacagcttgatcctgtg
ttagttgctaacatggagccccaatctcccagcttagcaaagaaaattcgtggagtggta
tcccagccttggtttattggcactataggtgtcatcatatggatgtcactgcttgtgttt
agtattgtgctgtacagacgaagaaagaagaagcagtcaaactgttttgacaatatcaag
cttgaaattgcttcattgaatcgtgatggcaccaccccatggatggaacagagctggcaa
caaaactctggtgagcacagctgccatgacttgatccggttatgttgtcccttgtcgaag
aaatccaaaggtccaaaacaacctgcactgaattgggccgatttgttgccccctccccct
gaacaccctcctcctactgacattgacgagactcctccgggatcaccgcagtaccacatt
ttagggtcaccaattccgtcgcagtatagcgtgaaatcgtcacagggatatcaaactgat
ccacatgatgaaattgcatccctagtgccatctcatcgatcacacggatcagtcgttaac
cgacatcatttacaagggtcgaatcacagtacgccaaacccaacacctccaacacgccga
caccctgattgtcacatggggactgaaatgctattgcctggatcaatgaggaacgatcac
ggaatctaccgagataattcatctgataaaacatcacgtagtaaaaaaaactcacgaaat
gggccgactcaccataatacgaaccgaagcggctcatcgcatcgggatatgagaaatgat
ccagagtgccatgaactttgcaattcattgccgttacagaattgcgagtcggacaacgag
gacggaccgccagatgagcatttgatgcccatgctgccagcacggctagaagacacccca
catggccctggactctgtatagatttacggccgtctgatcacatgatgtattcagaagtg
tctgatgaggatacgtcggctaaagaagacgatccagaagaaattgatggagacacagag
agtaattgtacaggttcaatgatggcatcgtgggcatcgctggatggaagcagtggtaca
agtgtgagatgtagcgcagcgagtgacacgtcagatggttcgttcttcaacgatgctgac
ttcgcgagcgctgtggctgcagcagctgagagtgccggccttaaagtagaaggaaccaaa
gttatcgatccgagtcgtgggggtaacaggaggctaactcctgcacagagggctgtacaa
agatcagggagcccactgacagatagcgatagcaatgctggtggtaatcacaaacagaaa
tatcacagaaaacaaccacatgatctgcaaagaaatataatgaaaccaatcgtagcagct
aaaaatgaacgagtcatgcctcctgttaaaccagttaaaccggaaaagcctgataaacct
gaaaaattgagcgagagaaggagtagtcacaaacgacctcagaaggcgagacaagaaaca
ggacattcccaacagcaccagcaaggggtaaaccctgcggatgaagtaataccgtataat
aagccaaatttcccctcgcagtcatcgagtgatacatcatcacgtggttcaactggcaga
cggaagtgtgagaaaccgtaccacccaccggtgattaacgaagggagcaacgaggttggc
tactgccttcgcgagactaatgactctggattacatgtcactgccaacccaatggcgttt
gaacacgatactagtaatcatttcaaagcatga
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