Entry |
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Name |
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like
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KO |
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Organism |
sko Saccoglossus kowalevskii (acorn worm)
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Brite |
KEGG Orthology (KO) [BR:sko00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:sko03016]
100375617
Enzymes [BR:sko01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100375617
Transfer RNA biogenesis [BR:sko03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100375617
Prokaryotic type
100375617
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Un
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AA seq |
485 aa
MAESGSIPVVGEKRPVAEDNESDVVIKKQRTEKSVSDTAPKETVQNAEQNKRKAKRKVVL
LLSYSGKGYMGMQRNKGVETIEGDLIKAIVTAGAVPQSHADIPQKMQFQRCARTDKGVSA
VRQVVSLKMMLVDNAVEQINNSLPPSIRVITYKRTTGGFNAKNTCSHRTYSYLMPTFALS
SNCNENYRVTDEVHQKAQDLLNCYKGTHNFHNFTSGKAFTEQSAMRFMRELNVSQAFVRC
GLEFVVITIIGQSFMIHQIRKMIGLVIAIIRGVAPKSTLDKCWEAGKMDIPKAPSLGLML
ENVHFDGYNKRYGNDGIHEALTWEQYEETIGKFKEEHIYPSIIETEIKEKSMMKWLTSLP
LHTYDTRDKDSYRAAHLNINTHQQSEKTAEMGEKEEVYLQKETSPSIHAKNEESVSVEEN
KVKNEGNSDKVHVNQKTDCTSSDENTNLQDKDGSNSEHSVVCTENNKSTDNTVLTEAGTA
EGIPQ |
NT seq |
1458 nt +upstreamnt +downstreamnt
atggcagaaagtggatcaattccagtggtgggcgagaaaagaccagtggctgaagacaat
gaatctgatgttgtcattaagaaacaaagaactgaaaagagtgtgtctgacactgcacca
aaagaaacagtacagaatgctgaacagaataaaagaaaagcaaaaagaaaagttgtatta
ttactctcttacagtggtaaaggctatatgggaatgcaaaggaataaaggagtagagaca
atagagggagacttgattaaagctatagtaacagcgggagcggttccacaaagtcatgct
gatataccacaaaagatgcaattccaacgatgtgcaagaactgataaaggagtttctgcc
gtccgtcaagttgtatcactcaaaatgatgctggtagacaatgcagtggaacaaataaat
aacagtttaccgccttccattcgagtgataacttataagcgtaccactggaggtttcaat
gccaagaatacttgtagccacagaacgtactcgtaccttatgccaacgttcgcattgtca
tctaattgcaacgaaaactaccgagttacagatgaagtgcatcaaaaagctcaggatctt
ttgaattgctacaaaggaacacacaactttcataatttcacatccggaaaagcctttaca
gaacagagtgccatgaggtttatgagggagttaaatgtcagccaggcatttgtccgatgt
ggtttagagtttgttgttataaccatcattggacaaagttttatgattcatcaaataaga
aagatgattggtctagtaatagccattattaggggagtagcgcccaaatcaactcttgac
aaatgctgggaagcaggaaagatggacattccgaaggcgccgtccttggggctcatgctg
gaaaatgttcactttgatggctacaataagagatatggtaatgatggtattcatgaagca
ttaacttgggagcagtatgaggaaacaattgggaagtttaaagaagaacatatttaccca
tctataattgaaacagaaatcaaagagaaatctatgatgaaatggttgacatcattacca
ctacatacatatgatacaagagacaaggattcttacagggcagcacatcttaatataaac
actcaccaacagagtgaaaaaacagctgagatgggagaaaaagaggaagtatatttgcag
aaagagacaagcccatcaatacatgctaagaatgaagaaagtgtctcagttgaggagaac
aaggtgaaaaatgagggtaatagtgataaagtacatgtaaatcagaaaactgactgtaca
tcatcagatgaaaacacaaaccttcaggataaagatggttcaaattcagagcactctgtt
gtgtgtactgaaaacaacaaatcaactgacaacactgtgttaacagaagcaggtacagcg
gaaggaataccacaatga |