Saccoglossus kowalevskii (acorn worm): 100375838
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Entry
100375838 CDS
T04123
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100375838
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100375838
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
Pre-60S particles
Helicases
100375838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
100375838
NCBI-ProteinID:
XP_002739459
LinkDB
All DBs
Position
Un
AA seq
851 aa
AA seq
DB search
MKNKKNTKKRPDKHWRKGRGKRSSESEKDVDHVQIVKPMDTLSPGFSANKVIDGYSSDAE
LNTRKMVAKQNRKKKKSGGFQAMGLSMGVLKGIFRKGYKVPTPIQRKCVPIIMDRKDVVA
MARTGSGKTAAFLIPMFEKLQRHSAKTGARALILSPTRELAVQTLKFTRELGKFLGLRSA
VILGGDKMDDQFAALHENPDIIIATPGRLLHVLVEMDLKLNSLEYVVFDEADRLFEMGFA
EQLEEIIQRLPDDRQTLLFSATLPKLLVEFARAGLNDPMLIRLDVESKLSDQLKLAFFST
RADDKISLLLHLLRNVIKPSEQTVIFLATMHHVDYIKEILTQAGINCCHIYSSLDPAARK
INVAKFTHKKAMVMLVTDVAARGIDIPLLDNVINFNFPAKPKLFVHRVGRVARAGRTGTA
YSLIASDELPYLLDLHLFLGRPLKCASPSHSRDADYLFGRVPQRVVDDEEATVLTLHEQS
LDIDTMKHVCNNAYKQYVKSRPAPAPESVKRMKEIDVSRIAIHPIFGEYIDKDENNRVQM
VDEIKKYKPHTTIFEVGVSTKSQPKYSVMKAKRRLHSNAIEKYKVKKKEEIENTAMLQNI
KEKAVFSSTEMSTDKDLEAVFSTVVAPGLKRKRRIEAMERKTKKQKPVVSVRDDDYYIHY
RSQDHHAERGLSIGDCSFDQQASRAMLDLTGDDADMMKKHKDNIKWDRKKKKFIRDAGDE
QSKKKKIKTESGTYIHASYKSNIYKDWLEKSKMDEMDEEEEEEKEKKTRKHKGGKWKGPQ
GKNKGSFHQKGKSRKPNQSKGPGGKRKKVRSEMKSKDQILKNRKTDAKKNFLRKTREKKA
MMRSRGRGKPR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagaaaaacaccaaaaaacgtcctgacaagcattggaggaaaggccgaggg
aaacgttcttcggagtcagaaaaggatgtcgaccatgtgcaaatcgtgaaaccaatggat
actctgagtccagggttctctgcaaacaaggtgatagatggttattcatccgatgcagaa
ctgaatacaaggaagatggttgctaaacaaaatagaaagaaaaaaaaatctggaggattt
caagcaatgggattatcaatgggtgtgttgaaaggaattttcaggaaaggttacaaagtt
ccaacaccaatacagaggaagtgtgtgcccattatcatggatcgtaaagatgttgttgcc
atggcgcgaactggaagtggtaaaacagcagcttttctcattcctatgtttgaaaaatta
caacgacattcggctaaaaccggggcacgagctcttatattatcaccaacaagagaatta
gctgtacagactttgaagtttaccagagagcttggtaaattccttggactgaggtcagct
gtaattctaggaggtgacaagatggatgaccagtttgcagcattacatgagaatcctgat
atcatcatagctacaccaggaagattgctgcatgtacttgttgagatggatctcaaacta
aactcactagagtatgttgtctttgatgaagctgacagattgtttgagatgggatttgca
gaacaacttgaggaaattatacagcgactaccagatgacagacagactctactcttctca
gcaactcttcccaaactactggtggagtttgcaagagctggattaaatgacccgatgttg
ataagattagatgtagaaagcaaactaagcgaccaattaaaattagcatttttcagtaca
agagccgatgacaagatatcgcttctcttgcatcttttgagaaatgtcatcaaaccatcg
gaacagacagtcatttttttggcaaccatgcatcacgtggattacattaaagagatttta
acgcaagctggcatcaactgctgccatatttatagttcgttagacccggcagctcgaaaa
ataaatgttgctaagtttactcacaagaaagccatggtgatgctggtaactgacgtggca
gcgagaggaattgatattccattgcttgacaatgtcattaactttaactttcctgcaaaa
cctaaattattcgtgcacagagtcggtcgcgttgctcgagctggacgtactggtacagcc
tactcactcatagcttctgatgaattgccatatctgttggatttacatctctttcttgga
agaccattgaaatgtgcttctccatcacattctagagacgctgactatctctttggtaga
gtacctcagagagtggttgatgacgaggaagcaaccgtattaacactgcatgaacaatcc
ctggacatagatacgatgaaacacgtatgtaataatgcttataaacagtacgttaagtcc
cgtccagcaccagcacctgagagtgtcaagagaatgaaagaaatagacgtttcacgtatt
gccattcatccaatatttggtgaatacatcgataaagatgaaaataatagagttcaaatg
gtcgatgaaataaagaaatataaacctcatacgacaatctttgaagttggtgtcagcaca
aaaagtcaaccaaaatactcagtcatgaaagcgaaaaggcgtttacatagtaatgcgatt
gaaaaatacaaagtgaagaagaaagaggagatagagaatacagccatgttgcagaacata
aaagaaaaagcggttttcagttcaacagaaatgagcactgataaagatttagaggctgtg
ttttctactgttgttgcaccgggactgaaaagaaaaagacgaattgaggccatggagaga
aagacaaagaaacaaaaacctgtggtgtcagtacgagatgatgactactatattcattac
agatctcaggatcatcatgctgaacgggggttgtccattggtgactgtagttttgaccaa
caagcgtcgcgagccatgcttgacttgacgggtgatgatgcagatatgatgaaaaaacat
aaagacaatataaaatgggatcgcaaaaagaagaaatttattagagatgctggggatgaa
caaagcaaaaagaaaaaaattaaaacagaaagtgggacttacattcatgcatcgtataaa
agtaatatatacaaagactggttagaaaaatccaagatggatgaaatggatgaagaagag
gaggaagagaaagaaaaaaaaactagaaaacacaaaggaggaaaatggaaagggcctcaa
ggaaaaaataaaggctcatttcaccaaaaaggaaagtctcggaaaccaaaccaaagtaaa
ggtcctggaggtaaaagaaagaaagtgagaagtgaaatgaaaagtaaagaccaaattttg
aaaaacagaaaaacagatgccaagaaaaattttcttcgtaaaacaagagagaagaaagca
atgatgaggagtagggggagaggaaaacctagatag
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