Saccoglossus kowalevskii (acorn worm): 100375998
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Entry
100375998 CDS
T04123
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100375998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100375998
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100375998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
100375998
NCBI-ProteinID:
XP_006825751
LinkDB
All DBs
Position
Un
AA seq
593 aa
AA seq
DB search
MANIHHWFLKEVFRWRTGASIAWAIILLPLFTSVYVVIARIDPLHPYTWIIGCIKDLLSF
TSFGYLVLLSIITGFVGVFNAKYYTVTPVVHRTRLALLLNTVNVYTVFHAICHGIAAGLM
TWCLTAVGFLYGMNYFIKQENYMAFPVVQQAKLFRMKSYLATCVLNSAWKTLTSMKYLYL
VYYLLGVFPKTWIIENFNLEGTNTVPLDSMMGLLDVYLFWLVLTTGTLVYTLWYFTLQVF
KVFNTQAFSFPVESTFAEDADKCLPMVMAERQIPLVQFLAFLDLSMLAEHSVHRRKQIFS
LSQPGGHAHNWNYISKECLATVEILTNNLLLFQDNVQVDGLRQQRVSGPTATPTCHPVKQ
LFSSPTPYIKPAITGATGKDSPLWDSSVAQSPAVYRTHASMLNRTESPLWDDTYAQSPAV
YRHTAAAKELMGANGIDKSTTKQSTSPKKSSFIENLKRRSLIAYFISPLPEVPSREIFVN
AQVNIWTIEALSRLVAASYTEDQYGVVQQSLHDILTAMLTLQITLDKHLKLPVLAAKLSR
QTKTAEENLKFCLRTTLKCALYRIVATFGEHLRNVKLDAEFETRLAQFMEYRE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacattcatcattggtttttgaaagaggtgttccgatggagaactggtgccagt
attgcctgggctataatccttctaccattgttcacgtctgtctacgttgtcattgctaga
attgaccctttacatccttatacatggatcattggatgtataaaagatttactatccttc
accagttttggatatcttgtgctattgtctattataactggatttgttggcgtcttcaat
gccaagtattatacagttacgcctgttgtacatagaacccgattagcgttgttgttgaac
actgtcaatgtttacaccgtattccatgcaatttgtcatggtattgccgctggtctcatg
acgtggtgtctaacagctgttggttttctctacggtatgaattatttcatcaaacaagaa
aattacatggcttttcctgttgtacagcaagccaagttgtttcgcatgaagagctacctt
gctacctgtgtattgaactcagcctggaaaacactgacatccatgaagtacttgtatctt
gtttactatcttctaggagtatttccaaaaacctggattatagagaattttaatttagaa
ggtacaaatactgtgccattggactctatgatgggtttgctggatgtgtatttattctgg
ctagtgttgacaactggtacattggtctatacactgtggtattttacacttcaagtgttc
aaagtattcaacactcaggcattttcattccctgtggagtcaacctttgctgaagatgca
gacaaatgtctacccatggtgatggccgaaagacaaataccacttgtccagtttctagca
tttctggatctctcgatgttagctgaacatagtgtacacagaagaaagcagatattcagt
ctgagccagccaggtggtcatgctcacaactggaactacatatctaaggagtgcctagca
acagtagaaatattaacaaataatttattattgtttcaagacaatgtacaagttgatggt
ttaagacaacaacgagttagtggtcctacagccacaccaacatgtcatcccgtcaaacaa
ttatttagctcccctactccctacatcaagccagccattactggtgctactgggaaagac
agtccactatgggatagttcagtagcgcagagtccagctgtttacaggacacatgcttca
atgttaaacagaactgagagtcctctgtgggacgatacttacgcacaaagccctgctgtg
tacagacatacagcagctgccaaagaactgatgggtgccaatggcatagacaagtctaca
acaaaacaatctacttcaccgaaaaaatcttcgttcattgagaacctgaagcgaagatct
ttaatagcgtacttcattagccctttacccgaggtacctagccgagaaatattcgtaaac
gcacaagtcaatatatggactatagaagcattgtctagacttgttgcagcatcatatacc
gaagatcagtacggagttgtgcagcagtcgctacacgatatcctcactgccatgttaact
ttacaaattacgcttgataaacacttaaaactgccagtacttgcagccaagttgtctaga
caaacaaagacagctgaagaaaatctcaaattctgtctgcgaacaacattgaagtgcgcc
ctctacagaatagtggcaacatttggagagcatttaaggaatgtgaagcttgatgcagag
tttgagacaagacttgcacagttcatggaatatcgggaatga
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