KEGG   Saccoglossus kowalevskii (acorn worm): 100375998
Entry
100375998         CDS       T04123                                 
Name
(RefSeq) nucleoporin NDC1-like
  KO
K14315  nucleoporin NDC1
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100375998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100375998
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100375998
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 100375998
NCBI-ProteinID: XP_006825751
LinkDB
Position
Un
AA seq 593 aa
MANIHHWFLKEVFRWRTGASIAWAIILLPLFTSVYVVIARIDPLHPYTWIIGCIKDLLSF
TSFGYLVLLSIITGFVGVFNAKYYTVTPVVHRTRLALLLNTVNVYTVFHAICHGIAAGLM
TWCLTAVGFLYGMNYFIKQENYMAFPVVQQAKLFRMKSYLATCVLNSAWKTLTSMKYLYL
VYYLLGVFPKTWIIENFNLEGTNTVPLDSMMGLLDVYLFWLVLTTGTLVYTLWYFTLQVF
KVFNTQAFSFPVESTFAEDADKCLPMVMAERQIPLVQFLAFLDLSMLAEHSVHRRKQIFS
LSQPGGHAHNWNYISKECLATVEILTNNLLLFQDNVQVDGLRQQRVSGPTATPTCHPVKQ
LFSSPTPYIKPAITGATGKDSPLWDSSVAQSPAVYRTHASMLNRTESPLWDDTYAQSPAV
YRHTAAAKELMGANGIDKSTTKQSTSPKKSSFIENLKRRSLIAYFISPLPEVPSREIFVN
AQVNIWTIEALSRLVAASYTEDQYGVVQQSLHDILTAMLTLQITLDKHLKLPVLAAKLSR
QTKTAEENLKFCLRTTLKCALYRIVATFGEHLRNVKLDAEFETRLAQFMEYRE
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggcgaacattcatcattggtttttgaaagaggtgttccgatggagaactggtgccagt
attgcctgggctataatccttctaccattgttcacgtctgtctacgttgtcattgctaga
attgaccctttacatccttatacatggatcattggatgtataaaagatttactatccttc
accagttttggatatcttgtgctattgtctattataactggatttgttggcgtcttcaat
gccaagtattatacagttacgcctgttgtacatagaacccgattagcgttgttgttgaac
actgtcaatgtttacaccgtattccatgcaatttgtcatggtattgccgctggtctcatg
acgtggtgtctaacagctgttggttttctctacggtatgaattatttcatcaaacaagaa
aattacatggcttttcctgttgtacagcaagccaagttgtttcgcatgaagagctacctt
gctacctgtgtattgaactcagcctggaaaacactgacatccatgaagtacttgtatctt
gtttactatcttctaggagtatttccaaaaacctggattatagagaattttaatttagaa
ggtacaaatactgtgccattggactctatgatgggtttgctggatgtgtatttattctgg
ctagtgttgacaactggtacattggtctatacactgtggtattttacacttcaagtgttc
aaagtattcaacactcaggcattttcattccctgtggagtcaacctttgctgaagatgca
gacaaatgtctacccatggtgatggccgaaagacaaataccacttgtccagtttctagca
tttctggatctctcgatgttagctgaacatagtgtacacagaagaaagcagatattcagt
ctgagccagccaggtggtcatgctcacaactggaactacatatctaaggagtgcctagca
acagtagaaatattaacaaataatttattattgtttcaagacaatgtacaagttgatggt
ttaagacaacaacgagttagtggtcctacagccacaccaacatgtcatcccgtcaaacaa
ttatttagctcccctactccctacatcaagccagccattactggtgctactgggaaagac
agtccactatgggatagttcagtagcgcagagtccagctgtttacaggacacatgcttca
atgttaaacagaactgagagtcctctgtgggacgatacttacgcacaaagccctgctgtg
tacagacatacagcagctgccaaagaactgatgggtgccaatggcatagacaagtctaca
acaaaacaatctacttcaccgaaaaaatcttcgttcattgagaacctgaagcgaagatct
ttaatagcgtacttcattagccctttacccgaggtacctagccgagaaatattcgtaaac
gcacaagtcaatatatggactatagaagcattgtctagacttgttgcagcatcatatacc
gaagatcagtacggagttgtgcagcagtcgctacacgatatcctcactgccatgttaact
ttacaaattacgcttgataaacacttaaaactgccagtacttgcagccaagttgtctaga
caaacaaagacagctgaagaaaatctcaaattctgtctgcgaacaacattgaagtgcgcc
ctctacagaatagtggcaacatttggagagcatttaaggaatgtgaagcttgatgcagag
tttgagacaagacttgcacagttcatggaatatcgggaatga

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