Saccoglossus kowalevskii (acorn worm): 100376052
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Entry
100376052 CDS
T04123
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100376052
03036 Chromosome and associated proteins [BR:
sko03036
]
100376052
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100376052
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100376052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YqgF
HHH_7
SH2_2
HTH_44
SPT6_acidic
Tex_YqgF
Tex_central_region
S1
Spt6_S1
HHH_9
SH2
S1_RRP5
Tex_N
HHH_3
Motif
Other DBs
NCBI-GeneID:
100376052
NCBI-ProteinID:
XP_006813691
LinkDB
All DBs
Position
Un
AA seq
1399 aa
AA seq
DB search
MSAEYFEEEAEVSDDDFKGSEDEEEEEEGEDLDKNLEDLIDDDPVEEDEDESSDSSDEEI
RKRKRKRRHHDSDDQLEDEDYELLEENLGTKIKRNKFRRLKQLSSDENESEDDMDEKVDD
REAIANQLFEGADEDEERDSIAPAMPAEEDKQYADLVDSEGSEESEDDDFIVGDDGEPLR
RKKDRRKPRYTDSALQEAQDIFGIDDFDIEEFNQYGDEYESEEDEYEDYEEEEEGESEVR
PRVKKKDKKKATKLSIYEVFEPSELERGHFTDLDKEIRTADMPERFKLRLIPVRMTKDEE
LDDEAEWIYKHAFMTLPITMQDVSDPLRSETSQVSSTFESKGPSTVSKIKEALNFIRNQQ
FEVPFIAFYRKEYIEPELNIYDLWKIYHWDEKWTQLRNRKLNLKRLFEKMQNYQFELIPH
DVDASLPDNIRPLTETDMERLDAVQSPEELKDVYMQFLLYYGRDIPKMQNAEKVRKRKVK
REEAGEDGEDGEVVVEDKEEPTEDVSGTSKEIKQAARKGMYGLCEQAGLDGVAKKFGLTP
EQFGENLRDNYQRHDTDQWPSEPSELSQEHLCSQFPTEDNVLRGAIYMVAMQLAHDPLVR
QCVRQTYYERAKISVIPTKKGIKEIDESHNCFLMKYLKNKPVRDLAGEQYLKLHLAEEDK
LLKTTIGIDMEEQPGYQTYFDEIKQLYYRDEFSHMVQEWNKLRTEAIEKALNKILYPHME
KELRGKLLKESKDCIIKASTRTAFNWIKIAPYQADQQMDDDDEFLDGPGPMGLKVLGIAY
SDDKKVPAFGALIDGDGEVQDFIRLPDIMLRRNSYWKRERDGKEADMEKLKDFISKKKPH
VIAVGAESREAIGLIQDIKRCLTELESEEQLPPINVELVDNNLATIYCNSKLCENEFREY
PTCLRQALSIARRLQDPLVEFSRLCNSDEDILCLQFHRMQDEVPKEELLYYIYLEFVFRV
NEIGLDVNKCINHPHTQQLVQFVCGLGPRKGMHLLRQLKSNNMRLENRTQLVTACNMGPK
VFINCAGFIKIDTNAMGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEENNPA
GALEEILENPDKLKDLDLDAFAEELERQGYGNKGITLYDIRAELNCRYKDLRVPFHSPTP
EERFAMLTKETPETFYVGKMVLCKVTGIAHRRPRGEQLDQANPVKIDETGLWQCPFCLQD
TFPELSEVWSHFDGNKCPGSAVGVKARLDNGVTGFIPTKMISDKNVKNPEDRVQIGMSIH
CRVTKLDTEKLQVDLTCRSSDLADRNGEWIPSRDIYYDYDVEKKLTNKDDVGNKKQQRRA
YVKRVIVHPSFHNIDYKQTEKMMENMEQGEVIVRPSSKGQDHLTVTWKVDDGICQHIDVR
EEGKENAFSLGQSLWISNE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggaatattttgaagaagaagcagaggtatcagatgatgacttcaaaggcagt
gaagatgaagaagaggaagaggagggagaagatctcgataagaacttagaagatctaatt
gatgatgaccctgtggaggaagatgaagatgaatcttccgattcttctgatgaagagatt
agaaagaggaagcgaaaaaggcgacaccatgacagtgacgatcaacttgaagatgaagat
tacgagttgctggaagaaaatttgggaactaaaattaaaaggaacaaatttcgaaggtta
aagcagctgtcaagtgacgagaacgaaagcgaggatgacatggatgagaaagttgatgat
agagaggccatcgctaatcagttgtttgaaggcgccgatgaggatgaagagagggattcc
atagctccagccatgccagccgaggaagacaaacagtacgctgatcttgttgactcagaa
ggatctgaggaatcagaggatgatgattttatagtaggtgatgatggagagccactcaga
aggaaaaaagatagaaggaaaccaagatacactgattcagcattgcaagaagctcaggat
atatttggtattgatgattttgacattgaggagtttaatcaatacggggacgagtacgaa
agtgaggaagatgaatacgaggattatgaggaagaggaggagggtgagagtgaagtaagg
ccgagagttaaaaagaaagataaaaagaaagccactaagctcagtatatacgaagtattt
gaaccgagtgagttagaacgaggacattttactgacttggataaagagatcaggacggct
gacatgccagagagattcaagctacggttgattcctgtgagaatgactaaagatgaagaa
ctagatgatgaagcggaatggatttacaaacacgcattcatgacacttccaattacaatg
caggatgtgtctgatccattacgttcagagacaagtcaagttagttctacgtttgaaagc
aaaggacccagtactgtcagcaagattaaggaagcgcttaactttataagaaatcaacaa
tttgaagttccatttatagcattctatcgtaaagagtacatagagcctgaactaaatata
tatgacttatggaagatataccactgggatgaaaagtggacacaactaagaaacagaaag
ctgaatctgaagcgactgtttgaaaaaatgcagaattaccagtttgagttgatacctcat
gacgtagatgccagcttacctgataacatcaggcctttaacggagactgatatggaaaga
cttgatgctgtgcagtctcccgaggagctgaaagatgtgtacatgcagttcttgctgtac
tatggtagggacattcccaaaatgcagaatgcagagaaggtgcggaagaggaaagtgaaa
cgagaggaggcgggagaagatggagaagatggagaggttgtagttgaagacaaggaagag
ccgactgaggatgtgagtggtacaagtaaagaaattaagcaagctgcccggaaaggaatg
tacgggctgtgtgagcaggctgggctagacggagttgccaaaaaatttggtttgacaccc
gagcagtttggcgagaatttgcgggataattatcagaggcatgatacagatcagtggcct
tctgaaccaagtgaattgtcgcaggaacacttgtgttcacaatttcccacggaagacaat
gtcttacgaggagctatttacatggtagccatgcagttggctcacgacccattggtaaga
cagtgtgtcagacaaacctattatgaacgagccaaaatatcagtcattccaaccaagaaa
ggcatcaaggaaattgatgaatcacataattgcttccttatgaaatacttaaaaaacaaa
ccagtgagagacttggctggagagcagtatttgaagcttcatctggcagaagaagataag
ttacttaaaacaactatcggtatcgacatggaagaacaaccaggataccagacatacttt
gatgaaattaaacagctttattaccgtgatgagtttagtcacatggtacaggaatggaac
aaactacgaactgaagccattgagaaggcactgaataaaatcctctatcctcacatggaa
aaagaacttagagggaaattactaaaagagtctaaagactgtattattaaggcgtcaaca
cgtacagcatttaactggatcaagatagcaccatatcaggctgatcagcagatggacgat
gatgatgaatttttggatggcccaggacccatgggtttaaaagttttgggaatcgcttac
tcagacgataaaaaagtaccagcttttggtgctttgattgatggtgatggcgaagtccag
gatttcatcagattgccagatatcatgctgagacgtaatagttactggaaacgagaacgt
gacggaaaggaagctgatatggagaaattgaaagactttatcagcaaaaagaaaccccat
gtcattgctgttggtgcagagtctagggaagctattggtttaattcaggacatcaaacgg
tgtctgacagaactggaatcggaagagcagttgccaccgattaatgtggaattggtagac
aataatttagctactatttattgtaactccaaactatgtgagaatgagtttcgtgaatat
ccaacctgtttacgtcaagcgttatctatcgcgaggcggttacaagacccattggttgaa
ttttcaagactctgcaattctgatgaagacattctgtgtttgcagtttcatcgaatgcag
gatgaagttcccaaagaggaactactgtactacatctacttagagtttgtcttccgtgtc
aatgagattggtttggatgtaaataaatgtattaatcatccccatacccagcagcttgta
cagtttgtatgtggtctgggaccaaggaaaggcatgcatcttttaaggcaattgaagtct
aacaacatgaggcttgaaaaccgaactcagttggtgacagcttgcaatatgggacctaaa
gtattcataaactgtgctggcttcattaaaatagacaccaatgctatgggtgacagtact
gattcgtacatagaagtcctggatggatcacgtgtgcatcctgagacctacgagtgggcc
aggaaaatggcggttgatgcactggagtacgatgaatctgcagaagagaataatccagcc
ggggctctagaggagattttggaaaatccagataaattaaaagatttggatttggatgct
tttgcagaggaattagaaagacagggttatggcaacaagggaatcacattgtatgatata
cgagccgagttgaattgtcgatacaaagatttgcgagtaccgtttcactctcctactcca
gaagaacgatttgccatgttgacgaaagagactcctgaaacattctatgtagggaagatg
gtgctgtgtaaagtaaccggaatagcgcataggcgaccccgtggcgagcagctggatcag
gccaaccccgtgaagatagatgaaacaggtttatggcagtgtccgttctgcttgcaagat
accttccctgagcttagtgaggtatggagtcactttgatggtaataaatgtcctggttca
gccgtcggtgtcaaagcaagattagataatggtgtgactgggtttataccgactaaaatg
attagtgataaaaatgtcaagaatcctgaagacagagtacagattggtatgtcaatacat
tgcagagtaactaagttagatacagagaaattacaagtagatctgacatgtagatcctct
gacctcgccgatagaaacggtgaatggataccatccagagatatttattacgactatgat
gtcgagaagaaactcacgaacaaagatgacgtcggcaataaaaagcaacaaagacgagcc
tacgtaaagagagttattgttcatccgtcgtttcataatattgattataagcaaactgaa
aagatgatggagaacatggaacaaggtgaagtcattgtcagaccaagtagcaaggggcag
gatcatttgacagtcacatggaaggtagacgatggtatttgtcaacatattgatgtcaga
gaagaaggcaaagaaaacgctttcagtttgggacagtcactgtggattagtaatgag
DBGET
integrated database retrieval system
