Saccoglossus kowalevskii (acorn worm): 100376070
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Entry
100376070 CDS
T04123
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100376070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100376070
03016 Transfer RNA biogenesis [BR:
sko03016
]
100376070
Enzymes [BR:
sko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
100376070
Messenger RNA biogenesis [BR:
sko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
100376070
Transfer RNA biogenesis [BR:
sko03016
]
Prokaryotic type
tRNA degradation factors
100376070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
DUF892
Motif
Other DBs
NCBI-GeneID:
100376070
NCBI-ProteinID:
XP_002737157
LinkDB
All DBs
Position
Un
AA seq
741 aa
AA seq
DB search
MAMRVCVYRNMGQHVSVAVGKNDICAAGSRFCGRISRWNHTNPWKDGIGMGDIDIQIGDK
PLKLSTGKLARFADGCAIAQIGETSVMVTAISKTTPSASSSFLPLTVDFRQKAAAAGRIP
MNHLRRERGPTDFEILTSRVIDRSIRPLFPQGYVFDSQIICNCLAVDGINDPDILSINAA
SAALSLSDIPWNGPVGAVRMGLIDGKFIVNPTRLELIKSKLNLIVTGSKKSSIVMLEGSA
ENILQPEFCKAIKLGIKETNQIINGIESLCKTHGKKKRVVENMLTIPEDILKAATNIAKD
KIYEVFSDYSHHKFSRDNAISNIRTECIDRLTAMFPENEVFLFNEAFNFLVKDVFRNIIL
DEDRRCDGRSLTALRDISCEVDMYKPLHGSALFQRGQTQVLCTVTFDSIDSALKGDALSE
IISGIKEKNFLLHYEFPPFATNEVGRMFASRRELGHGALAEKALKPVIPKKFPFTIRLTS
EVLESNGVPITAAVAGVAIGLVAKTEDDNRSNITDYRLMTDILGIEDYMGDMDFKMAGTK
KGITALQLVKWMSGELVRKMDVCGELVRKMDVCENIEVPVFKRAKFVGPGGYNIRKLMAG
TGVTVTQVDESNFSVFAPTPNAMIEAKEQIEELLQDDQEIELEFGGVYTATITEIRDSGI
MVKLYPSMTPTLLHNSQLDVRKISHPSVLKFEVGQEITVKFFGRDPVSGKIRLSRKVLLA
PASAVVRHLGPKDNSFSNTGV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcgtgtatgtgtttatcggaatatgggtcaacacgtgagtgtggcagttgga
aaaaatgacatatgtgctgcaggcagccgtttctgtggacggataagcaggtggaaccac
acaaatccgtggaaggatggaataggtatgggagatatcgatattcaaatcggagacaaa
cctttaaaactatccactggtaagcttgcaaggtttgcagatggttgtgccatagcacag
ataggagaaacatcagtaatggtcacagctataagtaaaactactccatcagcatcttca
tcttttcttcctctcactgttgatttcagacagaaagctgcagcagctgggcgaatccca
atgaatcatttaagaagagaaagaggaccaacagattttgaaatattaacaagtagagtg
attgatagatcaattcgtcctttgtttccacagggatatgtttttgatagccagataatt
tgtaactgtttagcagtagatggtattaatgatcctgatatacttagtattaatgcagcc
tcagcagctttatccttatccgatataccatggaatggtccagttggtgctgttagaatg
ggattaattgatggcaaatttatagtgaacccaactagattagaacttatcaaaagcaaa
cttaatttaattgttactggttccaagaaaagcagtattgttatgcttgaaggatctgct
gagaatattttacaacctgaattttgtaaagcaataaaattaggaattaaagaaactaat
caaatcataaatggtattgaaagtttatgtaaaacacatggcaagaaaaagagggttgta
gaaaatatgctgacaataccagaagatattttaaaggctgccacgaatatagcaaaagac
aagatatatgaagtgttttcagattattcacatcacaagttttccagagataatgctatt
tctaatatcagaactgaatgtatagacaggttaacagcaatgtttcccgaaaatgaggtt
tttctattcaatgaagcatttaattttcttgtcaaggatgtgtttcgtaatataatcttg
gatgaggacagaaggtgtgatggtcggagtctcacagcattgagagatatctcatgtgag
gttgatatgtataaaccattgcatggatcagctttgtttcaaagaggacaaactcaggtt
ctttgtacagtgacttttgactctattgactcagcattgaaaggagatgcactatcggaa
attatcagtggaattaaagaaaagaattttctacttcactatgagtttcctccctttgct
actaatgaagtaggtagaatgtttgcatctagaagagaactaggacatggtgcattagct
gagaaagctcttaaaccagttataccaaagaaatttccatttacaatccgcttaacatca
gaggtgttagaatcaaatggtgttcccattacagcagcagtagccggtgtagcaatagga
cttgttgcaaaaacagaagatgataataggagtaatattacagattatcggcttatgaca
gatatattgggaattgaagattatatgggagacatggatttcaaaatggccggcacaaag
aaaggaatcacagcactgcagttggtaaaatggatgtctggtgagttggtacgtaaaatg
gatgtctgtggtgagttggtacgtaaaatggatgtctgtgaaaatattgaagttcctgtt
tttaaaagagcgaaatttgttggaccaggaggctataatattaggaaactgatggctggc
acaggggtaacagtgacacaggttgatgaatcaaatttctcagtgtttgcaccaacacca
aatgcaatgatagaagctaaagaacaaatagaagaattacttcaggatgatcaagaaatt
gagttggaatttggcggtgtatacacagcaactattactgaaataagggattctggtata
atggttaaattgtatccatcaatgacccccacgttgttgcataattcacagttagatgtt
agaaagataagtcacccaagtgttcttaaatttgaagttggtcaagaaatcaccgttaaa
ttctttgggcgggatcctgtcagtggtaaaatacgtttgtcacgaaaagttttactggca
ccagcatcagcagttgtacgacatcttggacctaaggataattcattcagtaatactgga
gtctga
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