Saccoglossus kowalevskii (acorn worm): 100376189
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Entry
100376189 CDS
T04123
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100376189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sko03009
]
100376189
Ribosome biogenesis [BR:
sko03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100376189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
DUF2259
Motif
Other DBs
NCBI-GeneID:
100376189
NCBI-ProteinID:
XP_002741255
LinkDB
All DBs
Position
Un
AA seq
848 aa
AA seq
DB search
MRFGIDTCAGSSLIKERTIFSHDNKYLICCFGHVIKVLAIATGECLHELRGHQEYVTSVV
LNPSNKLQLFSSSLDGTVKLWDYTDGILFKTYHIGVPIHALYVPVTSKSLYVTVKEDKRS
TEKPYKFSLKQFVLPKSANKNIKLGESSTIFSGMYIRNQKKVSFGVNAEFVAAVSGKELF
VKMLKNDSTEMRCFRITKKSFTSVVCHPTDYCIATGDGTGQLLLWRNFTEPEKKVSQHKN
HWHSRSLQDICFSAEGSYIYTVGLECTVVQWQYETNHKSFLPRLGSPICYVSCSEDNSYI
ATSHLDNAIQVLSNGKIIQTFQGLTREYLPQHGNDVIPTGVVLDPRSHCVVLNGKPGHLQ
FYDMHTDKLLYNLDIVRQNYITADALHNTLVQTDVEKAAFDCHGNWLATVERRDDGVTAM
EMRLKFWQWSDKKQSFVLNTSIESPHQDKVTAMCFRPANNKINPSGTPMAVTSSKDNKFK
IWILIDDTDIYRKNVCWTCQSVGFYHDLPTGSIAFSTDGSLLAVVCSNIITLWDPDTNGL
KTRLCQPVMTKRRYACHQVLFGNGSSSHCLVAVYDDNITVWNLLTCSVSWSLYLDVSCLV
KDPSTDYFAAFTNQSDVYIFKASEQNAKHIYNQVSKSAVVAAIFVPHKQTQDATDALPWQ
QKSQLYFINEDQQLKSLRSIQELDKRQKMHAPRKSAIQENLPSTPFSKFLETYQTGGKRN
PSDISLHGNPGSVAAREIMNTPAHVLPPVSSLCNSFMKILLIPNSATSRIDDTESDEESS
TNNQTSDSEESEMEEDGLRTNTDQSKVIALNGSTEHFTQIDAKQLEKQSSKSFSWMKRFF
KTLHSEKE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttgggatcgacacgtgcgctggttctagtttgataaaagaaaggactattttc
tctcatgataacaagtatctaatctgttgttttggtcatgtgatcaaagtacttgcaatt
gccactggtgaatgtttacatgaattaagaggccaccaggagtatgttaccagtgttgtt
ctcaacccaagtaataaattacagcttttttcaagttcattggacggcacagtaaaactg
tgggattacacagatggtattctgttcaagacatatcacattggtgtaccaatacatgca
ttatatgttcctgttacatctaagagtttatatgttactgttaaagaggacaagagatca
actgagaagccttacaaatttagtttgaaacaatttgttttaccaaagtctgctaataaa
aatataaaactaggtgaatcatctacaattttttctgggatgtatatcaggaatcaaaaa
aaggtttcctttggtgtgaatgctgaattcgtagctgctgtatcagggaaggaattattt
gttaaaatgttgaagaatgattcaactgaaatgagatgctttcggatcaccaagaagagt
ttcactagtgttgtatgccatccaaccgattactgcattgcaacaggagatggaactggg
caacttcttctatggaggaattttactgaaccggagaaaaaagtttcacaacataaaaat
cactggcattcaagaagtttacaggacatttgtttttcagcagaaggttcctatatctac
actgttggtctggagtgtacagtagtgcagtggcaatatgaaaccaatcacaagtcattt
ctaccgaggctcggctcacctatatgttatgttagctgttctgaggacaattcctacatt
gcaacgagtcatctcgataatgcaatccaagtattatcaaatggtaaaataattcagaca
tttcaaggactaacaagggagtacctacctcagcatggtaatgacgtaatccctaccggt
gtggtattagatccacgatctcactgtgttgtattaaatggtaaaccaggacatttgcag
ttttatgatatgcacactgataaactcctctataatctggatattgtacgtcaaaactac
ataacagcagatgccctccataacactttggtacagacagatgtggaaaaagctgcattt
gattgccatggaaactggttggcgacagttgagaggagagatgatggcgtgactgccatg
gaaatgagactgaaattttggcaatggagtgataagaaacagagttttgttttaaacaca
agtatagaatcaccccatcaagataaagttacagccatgtgcttcagaccggcgaacaat
aaaatcaatccatcaggaacaccaatggctgtcacatcaagtaaagacaacaagttcaag
atttggattctaatcgatgataccgatatctaccgtaaaaatgtttgttggacttgtcaa
tctgttggtttttatcacgacttaccaactggtagtattgcgttctcaaccgacggttct
ctgctagcagtcgtgtgtagtaatattattacactgtgggatcctgacacgaacggtcta
aagacgaggctatgtcaacctgtaatgacaaaaagaagatacgcttgtcatcaagtctta
tttgggaatggatcctcgtcgcattgtcttgtagctgtgtatgatgataacataacagtc
tggaatcttctcacctgttcagtttcctggtctctttacctggatgtgagttgtctagtg
aaggacccgtctactgattactttgctgcctttaccaaccaatcagacgtatatatattc
aaagcatcggaacagaatgctaaacacatttacaatcaagtgagcaagtctgctgtagtg
gcggctatattcgtacctcataaacagactcaagatgctacagatgcattaccatggcaa
caaaaatcccaactatatttcatcaatgaagaccagcaactgaagtctttgcggagcata
caggagttagacaagaggcaaaaaatgcatgcacctagaaagagtgcaatacaggagaat
cttccatcaactccgttctccaagtttttggagacttatcagactggtgggaaaaggaac
cctagtgatattagtctacatggtaatcctggatcagttgctgcaagagagataatgaat
acaccagcacatgtgctgccaccagtcagttcactttgtaattcattcatgaagattctg
cttattccaaactcagccaccagcagaattgatgatacagaatctgatgaggaaagtagt
acaaacaatcagacatcagactctgaagaatcagaaatggaagaagatggtctgaggacg
aataccgatcaatcaaaagtcattgcactgaatggcagtactgaacactttacccagatt
gatgcaaaacaacttgaaaaacaatcttcaaaaagttttagttggatgaaaagatttttc
aaaacattacacagtgaaaaagaataa
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