Saccoglossus kowalevskii (acorn worm): 100376304
Help
Entry
100376304 CDS
T04123
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03030
DNA replication
sko03420
Nucleotide excision repair
sko03430
Mismatch repair
sko03440
Homologous recombination
sko03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100376304
03420 Nucleotide excision repair
100376304
03430 Mismatch repair
100376304
03440 Homologous recombination
100376304
03460 Fanconi anemia pathway
100376304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sko03000
]
100376304
03032 DNA replication proteins [BR:
sko03032
]
100376304
03400 DNA repair and recombination proteins [BR:
sko03400
]
100376304
Transcription factors [BR:
sko03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100376304
DNA replication proteins [BR:
sko03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100376304
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100376304
MMR (mismatch excision repair)
100376304
DSBR (double strand breaks repair)
HR (homologous recombination)
100376304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
EGF_CA
Motif
Other DBs
NCBI-GeneID:
100376304
NCBI-ProteinID:
XP_002730881
LinkDB
All DBs
Position
Un
AA seq
606 aa
AA seq
DB search
MSFSLSSGCIEAISSGDTPQKPIFQILGLKKISSTVQSSTDRYRLLLSDGQRSHSAMLAT
QLNKKVTDGELSVRSVIQLNKYICNTIADNKRVIIILEVNLIAGQNQVQDKIGNPVPIGQ
PAPPAQQNGQAPHNAQTGRGGLMSSRPTTTMPYNAANEMPKMPTTPSGGMSKVFPIASLT
PYQNRWTIRARVTNKGNIRHWNNSRGEGCLFSMDLIDDSAEIRATAFNDQCKKYFDMVQV
GQVYLISRGTLKTANKQYTSIKNDYEMSFTSETVVELCNDAEASDVPTVQFDFKQIGQLE
DIPKDTMVDVIGVCKSFSDVSTIVTRSTNRELSKRELHLVDDSEKVVTLTLWGTDLTRFW
IVRTRTFSNCPASWATFHDVQVVCVIYRTREGFVYLRPTHTIHWYDGEGNCKTITSISEQ
RTGGGGGTNWKNFIEVKKQGLGSGEKPDYFSCKATVIFIKKDNCMYKACPSAECNKKVVE
NSDGSYRCEKCAKEYPDFKYRMLLVINTVDFGDGQWVTCFQDQAQVILGGNTAEHIGSLK
DSNNESEFEAVFQEANFKSYNLRMRIKQETYNDETRLKCSCVEAKPLDYKEHSRRLIQDL
KTMISS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctcgttatcaagcggatgtattgaggcgatatctagtggtgatactccacaa
aagcctatattccagattttgggattaaaaaagattagttcaacagtacaaagcagcacc
gatagatatcgcctactcttgtcagatggacagagaagtcattctgccatgttggcaacc
cagttgaacaaaaaagtaacagatggagagttatcagtgaggagtgttatccagttgaat
aaatacatctgtaatactatagctgataacaaacgagtgatcatcattttagaagttaat
ttgattgctggtcagaatcaagtccaggataagattggcaacccagtacccataggccag
ccagctccaccagctcaacaaaatggacaggcaccacataatgcacaaacaggtcgaggt
gggttgatgagtagtcgacctaccacaacaatgccgtacaatgctgccaatgagatgcca
aagatgccaaccacaccaagtggaggaatgtctaaagtctttcctattgccagtcttaca
ccataccaaaacagatggacaattagagcacgtgtaactaataaaggcaacattcggcat
tggaacaattcccggggtgaaggctgtctcttctctatggatttaatcgatgactcagca
gaaatcagagccactgcctttaatgaccaatgtaagaaatactttgatatggtgcaagtt
ggtcaggtttatttaatatcgcgaggaacactaaagactgccaataaacaatacacatcc
attaaaaatgactacgagatgtcatttacctctgagacagttgtcgagttgtgcaatgat
gccgaggcaagtgatgttcccacagtacagtttgatttcaaacaaatcggccagctcgaa
gacatacctaaagacacaatggtcgacgtgattggagtgtgtaaaagtttcagtgacgta
tccaccatagtaacacgcagcacaaacagagagctgagtaaaagggaactacacttggtt
gatgattcagaaaaagttgtcactttgacactttggggaacagatctaacacgattctgg
attgtgagaacaagaaccttcagcaattgtcctgcatcttgggcaacatttcatgacgta
caagttgtctgtgtgatatatcggacccgagaaggttttgtataccttagacccactcac
accatccactggtatgatggtgaaggaaattgtaaaacaattacgtcaatctctgagcaa
agaactggaggtggtggaggtacaaattggaaaaactttattgaagtcaaaaaacaaggt
ctgggaagtggagaaaagccggactacttttcatgcaaagccactgtgatattcatcaaa
aaagataactgtatgtacaaagcgtgtccctctgcagaatgtaacaagaaagtagtggag
aactctgatggtagctacaggtgtgaaaaatgtgcgaaagaatatccagacttcaagtac
agaatgctgttagttataaatacagtagactttggtgatggccagtgggtaacgtgtttt
caggatcaagcacaagttatattgggaggaaatacagctgaacacattggtagccttaaa
gacagtaataatgaatcagagtttgaggcggtgttccaagaagccaattttaagtcttat
aatctgagaatgcgaatcaaacaagagacgtacaatgatgaaactcgtttgaaatgttca
tgtgttgaagccaaaccgcttgactacaaggagcatagcaggaggctaatccaggacctc
aaaacaatgatatcatcataa
DBGET
integrated database retrieval system
